RNA–Protein interactions for RNA: ENST00000611928.2

CLUHP11-201, Transcript of clustered mitochondria homolog pseudogene 11, humanhuman

BASIC

Gene CLUHP11, Length 1,026 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP11-201ENST00000611928 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
CLUHP11-201ENST00000611928 CCDC180Q9P1Z9 1646 aa23.76■■□□□ 1.39
CLUHP11-201ENST00000611928 ABCC9O60706 1549 aa23.61■■□□□ 1.37
CLUHP11-201ENST00000611928 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.2
CLUHP11-201ENST00000611928 DCAF8L2P0C7V8 631 aa22.46■■□□□ 1.19
CLUHP11-201ENST00000611928 NACADO15069 1562 aa22.38■■□□□ 1.17
CLUHP11-201ENST00000611928 UNC13AQ9UPW8 1703 aa22.08■■□□□ 1.12
CLUHP11-201ENST00000611928 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
CLUHP11-201ENST00000611928 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
CLUHP11-201ENST00000611928 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
CLUHP11-201ENST00000611928 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.09
CLUHP11-201ENST00000611928 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
CLUHP11-201ENST00000611928 BICRAQ9NZM4 1560 aa21.83■■□□□ 1.09
CLUHP11-201ENST00000611928 SCRIBQ14160 1630 aa21.77■■□□□ 1.07
CLUHP11-201ENST00000611928 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
CLUHP11-201ENST00000611928 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
CLUHP11-201ENST00000611928 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
CLUHP11-201ENST00000611928 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
CLUHP11-201ENST00000611928 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
CLUHP11-201ENST00000611928 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
CLUHP11-201ENST00000611928 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
CLUHP11-201ENST00000611928 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
CLUHP11-201ENST00000611928 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
CLUHP11-201ENST00000611928 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
CLUHP11-201ENST00000611928 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
CLUHP11-201ENST00000611928 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
CLUHP11-201ENST00000611928 PEG3Q9GZU2 1588 aa20.43■□□□□ 0.86
CLUHP11-201ENST00000611928 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
CLUHP11-201ENST00000611928 NESP48681 1621 aa20.34■□□□□ 0.85
CLUHP11-201ENST00000611928 WIZO95785 1651 aa20.32■□□□□ 0.84
CLUHP11-201ENST00000611928 CUX2O14529 1486 aa20.18■□□□□ 0.82
CLUHP11-201ENST00000611928 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
CLUHP11-201ENST00000611928 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
CLUHP11-201ENST00000611928 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
CLUHP11-201ENST00000611928 THOC2Q8NI27 1593 aaKnown RBP20.07■□□□□ 0.8
CLUHP11-201ENST00000611928 PDS5BQ9NTI5 1447 aa20.05■□□□□ 0.8
CLUHP11-201ENST00000611928 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
CLUHP11-201ENST00000611928 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
CLUHP11-201ENST00000611928 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
CLUHP11-201ENST00000611928 DNAJC5Q9H3Z4 198 aa19.88■□□□□ 0.77
CLUHP11-201ENST00000611928 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
CLUHP11-201ENST00000611928 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
CLUHP11-201ENST00000611928 CFTRP13569 1480 aa19.85■□□□□ 0.77
CLUHP11-201ENST00000611928 WDR62O43379 1518 aa19.81■□□□□ 0.76
CLUHP11-201ENST00000611928 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
CLUHP11-201ENST00000611928 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
CLUHP11-201ENST00000611928 URB2Q14146 1524 aaKnown RBP19.68■□□□□ 0.74
CLUHP11-201ENST00000611928 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
CLUHP11-201ENST00000611928 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
CLUHP11-201ENST00000611928 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
CLUHP11-201ENST00000611928 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
CLUHP11-201ENST00000611928 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
CLUHP11-201ENST00000611928 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
CLUHP11-201ENST00000611928 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
CLUHP11-201ENST00000611928 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
CLUHP11-201ENST00000611928 TARBP1Q13395 1621 aaKnown RBP19.3■□□□□ 0.68
CLUHP11-201ENST00000611928 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
CLUHP11-201ENST00000611928 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
CLUHP11-201ENST00000611928 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.67
CLUHP11-201ENST00000611928 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
CLUHP11-201ENST00000611928 CUX1P39880 1505 aa19.25■□□□□ 0.67
CLUHP11-201ENST00000611928 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
CLUHP11-201ENST00000611928 SOGA1O94964 1423 aa19.23■□□□□ 0.67
CLUHP11-201ENST00000611928 CHD1O14646 1710 aa19.2■□□□□ 0.66
CLUHP11-201ENST00000611928 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
CLUHP11-201ENST00000611928 FBLN2P98095 1184 aa19.17■□□□□ 0.66
CLUHP11-201ENST00000611928 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
CLUHP11-201ENST00000611928 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
CLUHP11-201ENST00000611928 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
CLUHP11-201ENST00000611928 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
CLUHP11-201ENST00000611928 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
CLUHP11-201ENST00000611928 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
CLUHP11-201ENST00000611928 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
CLUHP11-201ENST00000611928 ARHGEF11O15085 1522 aa19.03■□□□□ 0.64
CLUHP11-201ENST00000611928 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
CLUHP11-201ENST00000611928 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
CLUHP11-201ENST00000611928 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
CLUHP11-201ENST00000611928 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
CLUHP11-201ENST00000611928 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
CLUHP11-201ENST00000611928 TOP2BQ02880 1626 aa19■□□□□ 0.63
CLUHP11-201ENST00000611928 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
CLUHP11-201ENST00000611928 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
CLUHP11-201ENST00000611928 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
CLUHP11-201ENST00000611928 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
CLUHP11-201ENST00000611928 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
CLUHP11-201ENST00000611928 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
CLUHP11-201ENST00000611928 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
CLUHP11-201ENST00000611928 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
CLUHP11-201ENST00000611928 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
CLUHP11-201ENST00000611928 ERICH3Q5RHP9 1530 aa18.77■□□□□ 0.6
CLUHP11-201ENST00000611928 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
CLUHP11-201ENST00000611928 CEP170Q5SW79 1584 aa18.75■□□□□ 0.59
CLUHP11-201ENST00000611928 NUP160Q12769 1436 aa18.68■□□□□ 0.58
CLUHP11-201ENST00000611928 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
CLUHP11-201ENST00000611928 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
CLUHP11-201ENST00000611928 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
CLUHP11-201ENST00000611928 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
CLUHP11-201ENST00000611928 CUL7Q14999 1698 aa18.59■□□□□ 0.57
CLUHP11-201ENST00000611928 RUSC2Q8N2Y8 1516 aa18.57■□□□□ 0.56
CLUHP11-201ENST00000611928 IGF1RP08069 1367 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms