RNA–Protein interactions for RNA: ENST00000611581.1

PCDH18-206, Transcript of protocadherin 18, humanhuman

TSL 4 BASIC

Gene PCDH18, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-206ENST00000611581 NISCHQ9Y2I1 1504 aa21.82■■□□□ 1.08
PCDH18-206ENST00000611581 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
PCDH18-206ENST00000611581 ABCC9O60706 1549 aa19.1■□□□□ 0.65
PCDH18-206ENST00000611581 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
PCDH18-206ENST00000611581 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
PCDH18-206ENST00000611581 NACADO15069 1562 aa18.23■□□□□ 0.51
PCDH18-206ENST00000611581 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
PCDH18-206ENST00000611581 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
PCDH18-206ENST00000611581 DCAF1Q9Y4B6 1507 aa17.97■□□□□ 0.47
PCDH18-206ENST00000611581 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
PCDH18-206ENST00000611581 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCDH18-206ENST00000611581 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
PCDH18-206ENST00000611581 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
PCDH18-206ENST00000611581 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
PCDH18-206ENST00000611581 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
PCDH18-206ENST00000611581 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
PCDH18-206ENST00000611581 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
PCDH18-206ENST00000611581 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
PCDH18-206ENST00000611581 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
PCDH18-206ENST00000611581 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
PCDH18-206ENST00000611581 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
PCDH18-206ENST00000611581 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
PCDH18-206ENST00000611581 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
PCDH18-206ENST00000611581 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
PCDH18-206ENST00000611581 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
PCDH18-206ENST00000611581 WIZO95785 1651 aa16.75■□□□□ 0.27
PCDH18-206ENST00000611581 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
PCDH18-206ENST00000611581 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
PCDH18-206ENST00000611581 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
PCDH18-206ENST00000611581 NESP48681 1621 aa16.52■□□□□ 0.23
PCDH18-206ENST00000611581 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
PCDH18-206ENST00000611581 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
PCDH18-206ENST00000611581 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
PCDH18-206ENST00000611581 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
PCDH18-206ENST00000611581 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
PCDH18-206ENST00000611581 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
PCDH18-206ENST00000611581 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
PCDH18-206ENST00000611581 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
PCDH18-206ENST00000611581 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
PCDH18-206ENST00000611581 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
PCDH18-206ENST00000611581 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
PCDH18-206ENST00000611581 CFTRP13569 1480 aa16.22■□□□□ 0.19
PCDH18-206ENST00000611581 PRDM2Q13029 1718 aa16.21■□□□□ 0.19
PCDH18-206ENST00000611581 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
PCDH18-206ENST00000611581 CUX2O14529 1486 aa16.19■□□□□ 0.18
PCDH18-206ENST00000611581 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
PCDH18-206ENST00000611581 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
PCDH18-206ENST00000611581 WDR62O43379 1518 aa16.07■□□□□ 0.16
PCDH18-206ENST00000611581 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
PCDH18-206ENST00000611581 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
PCDH18-206ENST00000611581 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
PCDH18-206ENST00000611581 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
PCDH18-206ENST00000611581 CUX1P39880 1505 aa15.82■□□□□ 0.12
PCDH18-206ENST00000611581 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
PCDH18-206ENST00000611581 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
PCDH18-206ENST00000611581 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
PCDH18-206ENST00000611581 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
PCDH18-206ENST00000611581 RAD54L2Q9Y4B4 1467 aa15.77■□□□□ 0.11
PCDH18-206ENST00000611581 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
PCDH18-206ENST00000611581 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
PCDH18-206ENST00000611581 SOGA1O94964 1423 aa15.74■□□□□ 0.11
PCDH18-206ENST00000611581 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
PCDH18-206ENST00000611581 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
PCDH18-206ENST00000611581 WRNQ14191 1432 aaPredicted RBP eCLIP15.7■□□□□ 0.1
PCDH18-206ENST00000611581 DNAJC5Q9H3Z4 198 aa15.69■□□□□ 0.1
PCDH18-206ENST00000611581 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
PCDH18-206ENST00000611581 TDRD9Q8NDG6 1382 aaKnown RBP15.67■□□□□ 0.1
PCDH18-206ENST00000611581 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
PCDH18-206ENST00000611581 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
PCDH18-206ENST00000611581 FBLN2P98095 1184 aa15.61■□□□□ 0.09
PCDH18-206ENST00000611581 PBRM1Q86U86 1689 aa15.6■□□□□ 0.09
PCDH18-206ENST00000611581 CHD1O14646 1710 aa15.6■□□□□ 0.09
PCDH18-206ENST00000611581 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
PCDH18-206ENST00000611581 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
PCDH18-206ENST00000611581 SNAPC4Q5SXM2 1469 aa15.56■□□□□ 0.08
PCDH18-206ENST00000611581 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
PCDH18-206ENST00000611581 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
PCDH18-206ENST00000611581 GRIN2BQ13224 1484 aa15.53■□□□□ 0.08
PCDH18-206ENST00000611581 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
PCDH18-206ENST00000611581 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
PCDH18-206ENST00000611581 SYNJ2O15056 1496 aa15.43■□□□□ 0.06
PCDH18-206ENST00000611581 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
PCDH18-206ENST00000611581 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
PCDH18-206ENST00000611581 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
PCDH18-206ENST00000611581 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
PCDH18-206ENST00000611581 RIMBP3CA6NJZ7 1639 aa15.36■□□□□ 0.05
PCDH18-206ENST00000611581 RIMBP3BA6NNM3 1639 aa15.36■□□□□ 0.05
PCDH18-206ENST00000611581 RIMBP3Q9UFD9 1639 aa15.36■□□□□ 0.05
PCDH18-206ENST00000611581 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
PCDH18-206ENST00000611581 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
PCDH18-206ENST00000611581 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
PCDH18-206ENST00000611581 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
PCDH18-206ENST00000611581 CEP170Q5SW79 1584 aa15.3■□□□□ 0.04
PCDH18-206ENST00000611581 CUL7Q14999 1698 aa15.29■□□□□ 0.04
PCDH18-206ENST00000611581 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
PCDH18-206ENST00000611581 IGF1RP08069 1367 aa15.27■□□□□ 0.04
PCDH18-206ENST00000611581 CYB5RLQ6IPT4 315 aa15.23■□□□□ 0.03
PCDH18-206ENST00000611581 CARMIL1Q5VZK9 1371 aa15.23■□□□□ 0.03
PCDH18-206ENST00000611581 NUP160Q12769 1436 aa15.22■□□□□ 0.03
PCDH18-206ENST00000611581 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms