RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-223ENST00000611527 NISCHQ9Y2I1 1504 aa27.18■■□□□ 1.94
FGFR2-223ENST00000611527 CCDC180Q9P1Z9 1646 aa24.44■■□□□ 1.5
FGFR2-223ENST00000611527 ABCC9O60706 1549 aa24.41■■□□□ 1.5
FGFR2-223ENST00000611527 RB1CC1Q8TDY2 1594 aa23.24■■□□□ 1.31
FGFR2-223ENST00000611527 NACADO15069 1562 aa23.06■■□□□ 1.28
FGFR2-223ENST00000611527 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
FGFR2-223ENST00000611527 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
FGFR2-223ENST00000611527 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
FGFR2-223ENST00000611527 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
FGFR2-223ENST00000611527 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
FGFR2-223ENST00000611527 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
FGFR2-223ENST00000611527 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
FGFR2-223ENST00000611527 DCAF1Q9Y4B6 1507 aa22.44■■□□□ 1.18
FGFR2-223ENST00000611527 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
FGFR2-223ENST00000611527 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
FGFR2-223ENST00000611527 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
FGFR2-223ENST00000611527 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
FGFR2-223ENST00000611527 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
FGFR2-223ENST00000611527 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
FGFR2-223ENST00000611527 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
FGFR2-223ENST00000611527 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
FGFR2-223ENST00000611527 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
FGFR2-223ENST00000611527 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
FGFR2-223ENST00000611527 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
FGFR2-223ENST00000611527 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
FGFR2-223ENST00000611527 CUX2O14529 1486 aa21.03■□□□□ 0.96
FGFR2-223ENST00000611527 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
FGFR2-223ENST00000611527 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
FGFR2-223ENST00000611527 NESP48681 1621 aa20.98■□□□□ 0.95
FGFR2-223ENST00000611527 DNAJC5Q9H3Z4 198 aa20.96■□□□□ 0.95
FGFR2-223ENST00000611527 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
FGFR2-223ENST00000611527 LAMC3Q9Y6N6 1575 aa20.82■□□□□ 0.92
FGFR2-223ENST00000611527 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
FGFR2-223ENST00000611527 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
FGFR2-223ENST00000611527 WIZO95785 1651 aa20.73■□□□□ 0.91
FGFR2-223ENST00000611527 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
FGFR2-223ENST00000611527 CADPSQ9ULU8 1353 aa20.6■□□□□ 0.89
FGFR2-223ENST00000611527 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
FGFR2-223ENST00000611527 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
FGFR2-223ENST00000611527 WDR62O43379 1518 aa20.49■□□□□ 0.87
FGFR2-223ENST00000611527 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
FGFR2-223ENST00000611527 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
FGFR2-223ENST00000611527 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
FGFR2-223ENST00000611527 CFTRP13569 1480 aa20.39■□□□□ 0.85
FGFR2-223ENST00000611527 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
FGFR2-223ENST00000611527 URB2Q14146 1524 aaKnown RBP20.27■□□□□ 0.83
FGFR2-223ENST00000611527 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
FGFR2-223ENST00000611527 SUPT5HO00267 1087 aaKnown RBP20.13■□□□□ 0.81
FGFR2-223ENST00000611527 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
FGFR2-223ENST00000611527 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
FGFR2-223ENST00000611527 IFT140Q96RY7 1462 aa20.02■□□□□ 0.8
FGFR2-223ENST00000611527 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
FGFR2-223ENST00000611527 OSCARQ8IYS5 282 aa20■□□□□ 0.79
FGFR2-223ENST00000611527 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
FGFR2-223ENST00000611527 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
FGFR2-223ENST00000611527 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
FGFR2-223ENST00000611527 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
FGFR2-223ENST00000611527 RIMBP3CA6NJZ7 1639 aa19.85■□□□□ 0.77
FGFR2-223ENST00000611527 RIMBP3BA6NNM3 1639 aa19.85■□□□□ 0.77
FGFR2-223ENST00000611527 RIMBP3Q9UFD9 1639 aa19.85■□□□□ 0.77
FGFR2-223ENST00000611527 POLA1P09884 1462 aaPredicted RBP19.83■□□□□ 0.76
FGFR2-223ENST00000611527 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
FGFR2-223ENST00000611527 CHD1O14646 1710 aa19.8■□□□□ 0.76
FGFR2-223ENST00000611527 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
FGFR2-223ENST00000611527 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
FGFR2-223ENST00000611527 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
FGFR2-223ENST00000611527 SOGA1O94964 1423 aa19.7■□□□□ 0.74
FGFR2-223ENST00000611527 CUX1P39880 1505 aa19.7■□□□□ 0.74
FGFR2-223ENST00000611527 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
FGFR2-223ENST00000611527 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
FGFR2-223ENST00000611527 FBLN2P98095 1184 aa19.64■□□□□ 0.73
FGFR2-223ENST00000611527 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
FGFR2-223ENST00000611527 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
FGFR2-223ENST00000611527 MAGI1Q96QZ7 1491 aaPredicted RBP19.56■□□□□ 0.72
FGFR2-223ENST00000611527 GRIN2BQ13224 1484 aa19.55■□□□□ 0.72
FGFR2-223ENST00000611527 CYB5RLQ6IPT4 315 aa19.55■□□□□ 0.72
FGFR2-223ENST00000611527 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
FGFR2-223ENST00000611527 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
FGFR2-223ENST00000611527 SYNJ1O43426 1573 aa19.52■□□□□ 0.71
FGFR2-223ENST00000611527 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
FGFR2-223ENST00000611527 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
FGFR2-223ENST00000611527 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
FGFR2-223ENST00000611527 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
FGFR2-223ENST00000611527 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
FGFR2-223ENST00000611527 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
FGFR2-223ENST00000611527 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
FGFR2-223ENST00000611527 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
FGFR2-223ENST00000611527 ADAMTS12P58397 1594 aa19.35■□□□□ 0.69
FGFR2-223ENST00000611527 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
FGFR2-223ENST00000611527 GRIN2AQ12879 1464 aa19.32■□□□□ 0.68
FGFR2-223ENST00000611527 CEP170Q5SW79 1584 aa19.28■□□□□ 0.68
FGFR2-223ENST00000611527 ERCC6L2Q5T890 1561 aa19.25■□□□□ 0.67
FGFR2-223ENST00000611527 NUP160Q12769 1436 aa19.24■□□□□ 0.67
FGFR2-223ENST00000611527 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
FGFR2-223ENST00000611527 FHAD1B1AJZ9 1412 aa19.23■□□□□ 0.67
FGFR2-223ENST00000611527 SHROOM2Q13796 1616 aa19.2■□□□□ 0.66
FGFR2-223ENST00000611527 RUSC2Q8N2Y8 1516 aa19.09■□□□□ 0.65
FGFR2-223ENST00000611527 PRG4Q92954 1404 aaPredicted RBP19.05■□□□□ 0.64
FGFR2-223ENST00000611527 CUL7Q14999 1698 aa18.98■□□□□ 0.63
FGFR2-223ENST00000611527 JPH4Q96JJ6 628 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms