RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
CBWD1-219ENST00000611457 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
CBWD1-219ENST00000611457 MYO15BQ96JP2 1530 aa16.41■□□□□ 0.22
CBWD1-219ENST00000611457 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.18
CBWD1-219ENST00000611457 NACADO15069 1562 aa16.08■□□□□ 0.16
CBWD1-219ENST00000611457 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
CBWD1-219ENST00000611457 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
CBWD1-219ENST00000611457 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
CBWD1-219ENST00000611457 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
CBWD1-219ENST00000611457 ABCC9O60706 1549 aa15.76■□□□□ 0.11
CBWD1-219ENST00000611457 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
CBWD1-219ENST00000611457 PEG3Q9GZU2 1588 aa15.02□□□□□ -0.01
CBWD1-219ENST00000611457 SCRIBQ14160 1630 aa14.94□□□□□ -0.02
CBWD1-219ENST00000611457 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
CBWD1-219ENST00000611457 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
CBWD1-219ENST00000611457 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
CBWD1-219ENST00000611457 CC2D2AQ9P2K1 1620 aa14.8□□□□□ -0.04
CBWD1-219ENST00000611457 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
CBWD1-219ENST00000611457 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
CBWD1-219ENST00000611457 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
CBWD1-219ENST00000611457 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
CBWD1-219ENST00000611457 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
CBWD1-219ENST00000611457 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
CBWD1-219ENST00000611457 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
CBWD1-219ENST00000611457 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.11
CBWD1-219ENST00000611457 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
CBWD1-219ENST00000611457 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
CBWD1-219ENST00000611457 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
CBWD1-219ENST00000611457 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
CBWD1-219ENST00000611457 CUX2O14529 1486 aa14.24□□□□□ -0.13
CBWD1-219ENST00000611457 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
CBWD1-219ENST00000611457 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
CBWD1-219ENST00000611457 WIZO95785 1651 aa14.17□□□□□ -0.14
CBWD1-219ENST00000611457 WDR62O43379 1518 aa14.12□□□□□ -0.15
CBWD1-219ENST00000611457 KIF21AQ7Z4S6 1674 aa14.09□□□□□ -0.15
CBWD1-219ENST00000611457 RSF1Q96T23 1441 aaPredicted RBP14.08□□□□□ -0.16
CBWD1-219ENST00000611457 CFTRP13569 1480 aa14.05□□□□□ -0.16
CBWD1-219ENST00000611457 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
CBWD1-219ENST00000611457 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
CBWD1-219ENST00000611457 CADPSQ9ULU8 1353 aa13.9□□□□□ -0.18
CBWD1-219ENST00000611457 MRC2Q9UBG0 1479 aa13.89□□□□□ -0.19
CBWD1-219ENST00000611457 PDS5BQ9NTI5 1447 aa13.89□□□□□ -0.19
CBWD1-219ENST00000611457 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
CBWD1-219ENST00000611457 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
CBWD1-219ENST00000611457 CCDC88BA6NC98 1476 aa13.78□□□□□ -0.2
CBWD1-219ENST00000611457 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.2
CBWD1-219ENST00000611457 CEP164Q9UPV0 1460 aa13.76□□□□□ -0.21
CBWD1-219ENST00000611457 NESP48681 1621 aa13.73□□□□□ -0.21
CBWD1-219ENST00000611457 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
CBWD1-219ENST00000611457 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
CBWD1-219ENST00000611457 IFT140Q96RY7 1462 aa13.65□□□□□ -0.22
CBWD1-219ENST00000611457 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
CBWD1-219ENST00000611457 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
CBWD1-219ENST00000611457 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
CBWD1-219ENST00000611457 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
CBWD1-219ENST00000611457 PBRM1Q86U86 1689 aa13.58□□□□□ -0.23
CBWD1-219ENST00000611457 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
CBWD1-219ENST00000611457 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
CBWD1-219ENST00000611457 CUX1P39880 1505 aa13.49□□□□□ -0.25
CBWD1-219ENST00000611457 SHROOM2Q13796 1616 aa13.47□□□□□ -0.25
CBWD1-219ENST00000611457 CLASP1Q7Z460 1538 aa13.47□□□□□ -0.25
CBWD1-219ENST00000611457 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
CBWD1-219ENST00000611457 MAGI1Q96QZ7 1491 aaPredicted RBP13.43□□□□□ -0.26
CBWD1-219ENST00000611457 CHD1O14646 1710 aa13.43□□□□□ -0.26
CBWD1-219ENST00000611457 POLA1P09884 1462 aaPredicted RBP13.42□□□□□ -0.26
CBWD1-219ENST00000611457 CUL7Q14999 1698 aa13.41□□□□□ -0.26
CBWD1-219ENST00000611457 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
CBWD1-219ENST00000611457 SYNJ1O43426 1573 aa13.35□□□□□ -0.27
CBWD1-219ENST00000611457 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
CBWD1-219ENST00000611457 GRIN2BQ13224 1484 aa13.27□□□□□ -0.28
CBWD1-219ENST00000611457 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
CBWD1-219ENST00000611457 NUP160Q12769 1436 aa13.22□□□□□ -0.29
CBWD1-219ENST00000611457 DNAJC5Q9H3Z4 198 aa13.21□□□□□ -0.29
CBWD1-219ENST00000611457 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.3
CBWD1-219ENST00000611457 RIMBP3CA6NJZ7 1639 aa13.2□□□□□ -0.3
CBWD1-219ENST00000611457 RIMBP3BA6NNM3 1639 aa13.2□□□□□ -0.3
CBWD1-219ENST00000611457 RIMBP3Q9UFD9 1639 aa13.2□□□□□ -0.3
CBWD1-219ENST00000611457 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
CBWD1-219ENST00000611457 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
CBWD1-219ENST00000611457 SOGA1O94964 1423 aa13.15□□□□□ -0.3
CBWD1-219ENST00000611457 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
CBWD1-219ENST00000611457 GAPVD1Q14C86 1478 aa13.14□□□□□ -0.31
CBWD1-219ENST00000611457 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
CBWD1-219ENST00000611457 FHAD1B1AJZ9 1412 aa13.12□□□□□ -0.31
CBWD1-219ENST00000611457 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
CBWD1-219ENST00000611457 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
CBWD1-219ENST00000611457 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
CBWD1-219ENST00000611457 ARHGEF11O15085 1522 aa13.05□□□□□ -0.32
CBWD1-219ENST00000611457 UGGT2Q9NYU1 1516 aa13.02□□□□□ -0.33
CBWD1-219ENST00000611457 KIF21BO75037 1637 aa13□□□□□ -0.33
CBWD1-219ENST00000611457 EEA1Q15075 1411 aa12.99□□□□□ -0.33
CBWD1-219ENST00000611457 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
CBWD1-219ENST00000611457 MAPKBP1O60336 1514 aa12.96□□□□□ -0.33
CBWD1-219ENST00000611457 SAMD9Q5K651 1589 aa12.96□□□□□ -0.33
CBWD1-219ENST00000611457 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
CBWD1-219ENST00000611457 KIAA0586Q9BVV6 1533 aa12.95□□□□□ -0.34
CBWD1-219ENST00000611457 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
CBWD1-219ENST00000611457 GLI2P10070 1586 aa12.93□□□□□ -0.34
CBWD1-219ENST00000611457 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
CBWD1-219ENST00000611457 PRXQ9BXM0 1461 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 225.1 ms