RNA–Protein interactions for RNA: ENST00000611425.1

AP000356.3-202, humanhuman

TSL 3

Gene AP000356.3, Length 778 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000356.3-202ENST00000611425 NISCHQ9Y2I1 1504 aa33.04■■■□□ 2.88
AP000356.3-202ENST00000611425 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.3
AP000356.3-202ENST00000611425 ABCC9O60706 1549 aa28.74■■■□□ 2.19
AP000356.3-202ENST00000611425 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
AP000356.3-202ENST00000611425 NACADO15069 1562 aa27.71■■■□□ 2.03
AP000356.3-202ENST00000611425 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
AP000356.3-202ENST00000611425 DCAF8L2P0C7V8 631 aa27.56■■■□□ 2
AP000356.3-202ENST00000611425 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
AP000356.3-202ENST00000611425 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
AP000356.3-202ENST00000611425 UNC13AQ9UPW8 1703 aa26.96■■□□□ 1.91
AP000356.3-202ENST00000611425 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
AP000356.3-202ENST00000611425 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
AP000356.3-202ENST00000611425 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
AP000356.3-202ENST00000611425 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
AP000356.3-202ENST00000611425 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
AP000356.3-202ENST00000611425 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
AP000356.3-202ENST00000611425 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
AP000356.3-202ENST00000611425 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
AP000356.3-202ENST00000611425 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
AP000356.3-202ENST00000611425 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
AP000356.3-202ENST00000611425 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
AP000356.3-202ENST00000611425 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
AP000356.3-202ENST00000611425 ATAD2BQ9ULI0 1458 aa25.52■■□□□ 1.68
AP000356.3-202ENST00000611425 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
AP000356.3-202ENST00000611425 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
AP000356.3-202ENST00000611425 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
AP000356.3-202ENST00000611425 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
AP000356.3-202ENST00000611425 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
AP000356.3-202ENST00000611425 WIZO95785 1651 aa25.11■■□□□ 1.61
AP000356.3-202ENST00000611425 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
AP000356.3-202ENST00000611425 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
AP000356.3-202ENST00000611425 ERCC6Q03468 1493 aa24.86■■□□□ 1.57
AP000356.3-202ENST00000611425 NESP48681 1621 aa24.82■■□□□ 1.56
AP000356.3-202ENST00000611425 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
AP000356.3-202ENST00000611425 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
AP000356.3-202ENST00000611425 CUX2O14529 1486 aa24.65■■□□□ 1.54
AP000356.3-202ENST00000611425 CFTRP13569 1480 aa24.63■■□□□ 1.53
AP000356.3-202ENST00000611425 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
AP000356.3-202ENST00000611425 KIF21AQ7Z4S6 1674 aa24.54■■□□□ 1.52
AP000356.3-202ENST00000611425 THOC2Q8NI27 1593 aaKnown RBP24.51■■□□□ 1.51
AP000356.3-202ENST00000611425 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
AP000356.3-202ENST00000611425 CEP164Q9UPV0 1460 aa24.49■■□□□ 1.51
AP000356.3-202ENST00000611425 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
AP000356.3-202ENST00000611425 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
AP000356.3-202ENST00000611425 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
AP000356.3-202ENST00000611425 WDR62O43379 1518 aa24.37■■□□□ 1.49
AP000356.3-202ENST00000611425 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.46
AP000356.3-202ENST00000611425 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
AP000356.3-202ENST00000611425 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
AP000356.3-202ENST00000611425 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.44
AP000356.3-202ENST00000611425 IFT140Q96RY7 1462 aa24■■□□□ 1.43
AP000356.3-202ENST00000611425 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
AP000356.3-202ENST00000611425 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
AP000356.3-202ENST00000611425 CUX1P39880 1505 aa23.84■■□□□ 1.41
AP000356.3-202ENST00000611425 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
AP000356.3-202ENST00000611425 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
AP000356.3-202ENST00000611425 SOGA1O94964 1423 aa23.79■■□□□ 1.4
AP000356.3-202ENST00000611425 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
AP000356.3-202ENST00000611425 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
AP000356.3-202ENST00000611425 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
AP000356.3-202ENST00000611425 EIF4G3O43432 1585 aaKnown RBP23.73■■□□□ 1.39
AP000356.3-202ENST00000611425 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
AP000356.3-202ENST00000611425 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
AP000356.3-202ENST00000611425 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
AP000356.3-202ENST00000611425 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.38
AP000356.3-202ENST00000611425 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
AP000356.3-202ENST00000611425 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
AP000356.3-202ENST00000611425 TDRD9Q8NDG6 1382 aaKnown RBP23.61■■□□□ 1.37
AP000356.3-202ENST00000611425 OSCARQ8IYS5 282 aa23.6■■□□□ 1.37
AP000356.3-202ENST00000611425 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
AP000356.3-202ENST00000611425 GAPVD1Q14C86 1478 aa23.52■■□□□ 1.36
AP000356.3-202ENST00000611425 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
AP000356.3-202ENST00000611425 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
AP000356.3-202ENST00000611425 SNAPC4Q5SXM2 1469 aa23.47■■□□□ 1.35
AP000356.3-202ENST00000611425 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
AP000356.3-202ENST00000611425 CHD1O14646 1710 aa23.4■■□□□ 1.34
AP000356.3-202ENST00000611425 FBLN2P98095 1184 aa23.4■■□□□ 1.34
AP000356.3-202ENST00000611425 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
AP000356.3-202ENST00000611425 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
AP000356.3-202ENST00000611425 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
AP000356.3-202ENST00000611425 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
AP000356.3-202ENST00000611425 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
AP000356.3-202ENST00000611425 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
AP000356.3-202ENST00000611425 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
AP000356.3-202ENST00000611425 CLASP1Q7Z460 1538 aa23.19■■□□□ 1.3
AP000356.3-202ENST00000611425 ARHGEF11O15085 1522 aa23.17■■□□□ 1.3
AP000356.3-202ENST00000611425 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
AP000356.3-202ENST00000611425 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
AP000356.3-202ENST00000611425 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
AP000356.3-202ENST00000611425 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
AP000356.3-202ENST00000611425 NUP160Q12769 1436 aa23.13■■□□□ 1.29
AP000356.3-202ENST00000611425 IGF1RP08069 1367 aa23.13■■□□□ 1.29
AP000356.3-202ENST00000611425 CUL7Q14999 1698 aa23.13■■□□□ 1.29
AP000356.3-202ENST00000611425 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
AP000356.3-202ENST00000611425 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
AP000356.3-202ENST00000611425 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
AP000356.3-202ENST00000611425 CYB5RLQ6IPT4 315 aa22.94■■□□□ 1.26
AP000356.3-202ENST00000611425 SHROOM2Q13796 1616 aa22.93■■□□□ 1.26
AP000356.3-202ENST00000611425 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
AP000356.3-202ENST00000611425 KIAA0586Q9BVV6 1533 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms