RNA–Protein interactions for RNA: ENST00000611116.1

TRAC-201, Transcript of T cell receptor alpha constant, humanhuman

APPRIS P1 BASIC

Gene TRAC, Length 976 nt, Biotype TR C gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAC-201ENST00000611116 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
TRAC-201ENST00000611116 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
TRAC-201ENST00000611116 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
TRAC-201ENST00000611116 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
TRAC-201ENST00000611116 ABCC9O60706 1549 aa21.71■■□□□ 1.07
TRAC-201ENST00000611116 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
TRAC-201ENST00000611116 NACADO15069 1562 aa20.72■□□□□ 0.91
TRAC-201ENST00000611116 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
TRAC-201ENST00000611116 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
TRAC-201ENST00000611116 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
TRAC-201ENST00000611116 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
TRAC-201ENST00000611116 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
TRAC-201ENST00000611116 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
TRAC-201ENST00000611116 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
TRAC-201ENST00000611116 PABPN1Q86U42 306 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRAC-201ENST00000611116 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
TRAC-201ENST00000611116 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
TRAC-201ENST00000611116 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
TRAC-201ENST00000611116 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
TRAC-201ENST00000611116 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
TRAC-201ENST00000611116 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
TRAC-201ENST00000611116 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
TRAC-201ENST00000611116 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
TRAC-201ENST00000611116 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
TRAC-201ENST00000611116 SMARCA2P51531 1590 aa19.08■□□□□ 0.65
TRAC-201ENST00000611116 NCAPD3P42695 1498 aa19.07■□□□□ 0.64
TRAC-201ENST00000611116 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
TRAC-201ENST00000611116 FOXD1Q16676 465 aa19.01■□□□□ 0.63
TRAC-201ENST00000611116 HMGXB3Q12766 1538 aa19■□□□□ 0.63
TRAC-201ENST00000611116 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
TRAC-201ENST00000611116 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
TRAC-201ENST00000611116 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
TRAC-201ENST00000611116 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
TRAC-201ENST00000611116 WIZO95785 1651 aa18.79■□□□□ 0.6
TRAC-201ENST00000611116 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
TRAC-201ENST00000611116 NESP48681 1621 aa18.71■□□□□ 0.58
TRAC-201ENST00000611116 LAMC3Q9Y6N6 1575 aa18.66■□□□□ 0.58
TRAC-201ENST00000611116 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
TRAC-201ENST00000611116 CUX2O14529 1486 aa18.58■□□□□ 0.57
TRAC-201ENST00000611116 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
TRAC-201ENST00000611116 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
TRAC-201ENST00000611116 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
TRAC-201ENST00000611116 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.55
TRAC-201ENST00000611116 THOC2Q8NI27 1593 aaKnown RBP18.49■□□□□ 0.55
TRAC-201ENST00000611116 CFTRP13569 1480 aa18.37■□□□□ 0.53
TRAC-201ENST00000611116 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
TRAC-201ENST00000611116 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
TRAC-201ENST00000611116 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
TRAC-201ENST00000611116 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
TRAC-201ENST00000611116 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
TRAC-201ENST00000611116 WDR62O43379 1518 aa18.29■□□□□ 0.52
TRAC-201ENST00000611116 DNAJC5Q9H3Z4 198 aa18.18■□□□□ 0.5
TRAC-201ENST00000611116 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
TRAC-201ENST00000611116 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
TRAC-201ENST00000611116 ADRA2BP18089 450 aa18.11■□□□□ 0.49
TRAC-201ENST00000611116 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
TRAC-201ENST00000611116 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
TRAC-201ENST00000611116 ABCC8Q09428 1581 aa18.01■□□□□ 0.47
TRAC-201ENST00000611116 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
TRAC-201ENST00000611116 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
TRAC-201ENST00000611116 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
TRAC-201ENST00000611116 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
TRAC-201ENST00000611116 EIF4G3O43432 1585 aaKnown RBP17.86■□□□□ 0.45
TRAC-201ENST00000611116 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
TRAC-201ENST00000611116 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.45
TRAC-201ENST00000611116 CUX1P39880 1505 aa17.81■□□□□ 0.44
TRAC-201ENST00000611116 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
TRAC-201ENST00000611116 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.44
TRAC-201ENST00000611116 SOGA1O94964 1423 aa17.77■□□□□ 0.44
TRAC-201ENST00000611116 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
TRAC-201ENST00000611116 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
TRAC-201ENST00000611116 WDR97A6NE52 1622 aa17.7■□□□□ 0.42
TRAC-201ENST00000611116 CHD1O14646 1710 aa17.69■□□□□ 0.42
TRAC-201ENST00000611116 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
TRAC-201ENST00000611116 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
TRAC-201ENST00000611116 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
TRAC-201ENST00000611116 FBLN2P98095 1184 aa17.63■□□□□ 0.41
TRAC-201ENST00000611116 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
TRAC-201ENST00000611116 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
TRAC-201ENST00000611116 MSH5O43196 834 aa17.62■□□□□ 0.41
TRAC-201ENST00000611116 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
TRAC-201ENST00000611116 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
TRAC-201ENST00000611116 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
TRAC-201ENST00000611116 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
TRAC-201ENST00000611116 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
TRAC-201ENST00000611116 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
TRAC-201ENST00000611116 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
TRAC-201ENST00000611116 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
TRAC-201ENST00000611116 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
TRAC-201ENST00000611116 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
TRAC-201ENST00000611116 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
TRAC-201ENST00000611116 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
TRAC-201ENST00000611116 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
TRAC-201ENST00000611116 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
TRAC-201ENST00000611116 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
TRAC-201ENST00000611116 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
TRAC-201ENST00000611116 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
TRAC-201ENST00000611116 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
TRAC-201ENST00000611116 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
TRAC-201ENST00000611116 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms