RNA–Protein interactions for RNA: ENST00000610539.1

PCDHGC4-202, Transcript of protocadherin gamma subfamily C, 4, humanhuman

TSL 4

Gene PCDHGC4, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-202ENST00000610539 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
PCDHGC4-202ENST00000610539 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
PCDHGC4-202ENST00000610539 ABCC9O60706 1549 aa29.6■■■□□ 2.33
PCDHGC4-202ENST00000610539 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
PCDHGC4-202ENST00000610539 NACADO15069 1562 aa28.43■■■□□ 2.14
PCDHGC4-202ENST00000610539 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
PCDHGC4-202ENST00000610539 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
PCDHGC4-202ENST00000610539 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
PCDHGC4-202ENST00000610539 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
PCDHGC4-202ENST00000610539 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
PCDHGC4-202ENST00000610539 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
PCDHGC4-202ENST00000610539 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
PCDHGC4-202ENST00000610539 SCRIBQ14160 1630 aa27.43■■□□□ 1.98
PCDHGC4-202ENST00000610539 SHROOM4Q9ULL8 1493 aa27.41■■□□□ 1.98
PCDHGC4-202ENST00000610539 DNAJC5BQ9UF47 199 aa27.37■■□□□ 1.97
PCDHGC4-202ENST00000610539 EIF4G1Q04637 1599 aaKnown RBP26.91■■□□□ 1.9
PCDHGC4-202ENST00000610539 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
PCDHGC4-202ENST00000610539 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
PCDHGC4-202ENST00000610539 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
PCDHGC4-202ENST00000610539 NCAPD3P42695 1498 aa26.24■■□□□ 1.79
PCDHGC4-202ENST00000610539 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
PCDHGC4-202ENST00000610539 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
PCDHGC4-202ENST00000610539 SMARCA2P51531 1590 aa26.16■■□□□ 1.78
PCDHGC4-202ENST00000610539 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
PCDHGC4-202ENST00000610539 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
PCDHGC4-202ENST00000610539 MROH2BQ7Z745 1585 aa26.05■■□□□ 1.76
PCDHGC4-202ENST00000610539 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
PCDHGC4-202ENST00000610539 WIZO95785 1651 aa25.74■■□□□ 1.71
PCDHGC4-202ENST00000610539 RSF1Q96T23 1441 aaPredicted RBP25.7■■□□□ 1.7
PCDHGC4-202ENST00000610539 NESP48681 1621 aa25.58■■□□□ 1.69
PCDHGC4-202ENST00000610539 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
PCDHGC4-202ENST00000610539 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
PCDHGC4-202ENST00000610539 TOP2AP11388 1531 aaKnown RBP25.49■■□□□ 1.67
PCDHGC4-202ENST00000610539 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
PCDHGC4-202ENST00000610539 CUX2O14529 1486 aa25.41■■□□□ 1.66
PCDHGC4-202ENST00000610539 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
PCDHGC4-202ENST00000610539 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
PCDHGC4-202ENST00000610539 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
PCDHGC4-202ENST00000610539 CFTRP13569 1480 aa25.27■■□□□ 1.64
PCDHGC4-202ENST00000610539 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
PCDHGC4-202ENST00000610539 FANCD2Q9BXW9 1451 aa25.11■■□□□ 1.61
PCDHGC4-202ENST00000610539 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
PCDHGC4-202ENST00000610539 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
PCDHGC4-202ENST00000610539 WDR62O43379 1518 aa25.07■■□□□ 1.6
PCDHGC4-202ENST00000610539 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
PCDHGC4-202ENST00000610539 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
PCDHGC4-202ENST00000610539 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
PCDHGC4-202ENST00000610539 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
PCDHGC4-202ENST00000610539 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
PCDHGC4-202ENST00000610539 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
PCDHGC4-202ENST00000610539 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
PCDHGC4-202ENST00000610539 IFT140Q96RY7 1462 aa24.6■■□□□ 1.53
PCDHGC4-202ENST00000610539 POLA1P09884 1462 aaPredicted RBP24.49■■□□□ 1.51
PCDHGC4-202ENST00000610539 TARBP1Q13395 1621 aaKnown RBP24.48■■□□□ 1.51
PCDHGC4-202ENST00000610539 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
PCDHGC4-202ENST00000610539 CUX1P39880 1505 aa24.45■■□□□ 1.5
PCDHGC4-202ENST00000610539 EIF4G3O43432 1585 aaKnown RBP24.39■■□□□ 1.5
PCDHGC4-202ENST00000610539 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
PCDHGC4-202ENST00000610539 SOGA1O94964 1423 aa24.35■■□□□ 1.49
PCDHGC4-202ENST00000610539 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
PCDHGC4-202ENST00000610539 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
PCDHGC4-202ENST00000610539 AQRO60306 1485 aaKnown RBP eCLIP24.3■■□□□ 1.48
PCDHGC4-202ENST00000610539 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
PCDHGC4-202ENST00000610539 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
PCDHGC4-202ENST00000610539 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
PCDHGC4-202ENST00000610539 TDRD9Q8NDG6 1382 aaKnown RBP24.21■■□□□ 1.47
PCDHGC4-202ENST00000610539 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
PCDHGC4-202ENST00000610539 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
PCDHGC4-202ENST00000610539 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
PCDHGC4-202ENST00000610539 GRIN2BQ13224 1484 aa24.12■■□□□ 1.45
PCDHGC4-202ENST00000610539 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
PCDHGC4-202ENST00000610539 CHD1O14646 1710 aa24.1■■□□□ 1.45
PCDHGC4-202ENST00000610539 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
PCDHGC4-202ENST00000610539 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.45
PCDHGC4-202ENST00000610539 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
PCDHGC4-202ENST00000610539 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
PCDHGC4-202ENST00000610539 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
PCDHGC4-202ENST00000610539 FBLN2P98095 1184 aa23.95■■□□□ 1.42
PCDHGC4-202ENST00000610539 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
PCDHGC4-202ENST00000610539 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
PCDHGC4-202ENST00000610539 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
PCDHGC4-202ENST00000610539 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
PCDHGC4-202ENST00000610539 ARHGEF11O15085 1522 aa23.9■■□□□ 1.42
PCDHGC4-202ENST00000610539 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
PCDHGC4-202ENST00000610539 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.41
PCDHGC4-202ENST00000610539 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
PCDHGC4-202ENST00000610539 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
PCDHGC4-202ENST00000610539 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
PCDHGC4-202ENST00000610539 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
PCDHGC4-202ENST00000610539 NUP160Q12769 1436 aa23.75■■□□□ 1.39
PCDHGC4-202ENST00000610539 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
PCDHGC4-202ENST00000610539 ARAP1Q96P48 1450 aa23.7■■□□□ 1.38
PCDHGC4-202ENST00000610539 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
PCDHGC4-202ENST00000610539 IGF1RP08069 1367 aa23.66■■□□□ 1.38
PCDHGC4-202ENST00000610539 CUL7Q14999 1698 aa23.62■■□□□ 1.37
PCDHGC4-202ENST00000610539 CYB5RLQ6IPT4 315 aa23.61■■□□□ 1.37
PCDHGC4-202ENST00000610539 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
PCDHGC4-202ENST00000610539 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
PCDHGC4-202ENST00000610539 ERCC6L2Q5T890 1561 aa23.49■■□□□ 1.35
PCDHGC4-202ENST00000610539 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 213.5 ms