RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 NISCHQ9Y2I1 1504 aa35.07■■■■□ 3.21
MUC1-222ENST00000610468 CCDC180Q9P1Z9 1646 aa31.45■■■□□ 2.62
MUC1-222ENST00000610468 ABCC9O60706 1549 aa31.44■■■□□ 2.62
MUC1-222ENST00000610468 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
MUC1-222ENST00000610468 NACADO15069 1562 aa29.77■■■□□ 2.36
MUC1-222ENST00000610468 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
MUC1-222ENST00000610468 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
MUC1-222ENST00000610468 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
MUC1-222ENST00000610468 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
MUC1-222ENST00000610468 UNC13AQ9UPW8 1703 aa29.16■■■□□ 2.26
MUC1-222ENST00000610468 BICRAQ9NZM4 1560 aa29.1■■■□□ 2.25
MUC1-222ENST00000610468 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
MUC1-222ENST00000610468 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
MUC1-222ENST00000610468 SHROOM4Q9ULL8 1493 aa28.79■■■□□ 2.2
MUC1-222ENST00000610468 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
MUC1-222ENST00000610468 CC2D2AQ9P2K1 1620 aa28.41■■■□□ 2.14
MUC1-222ENST00000610468 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
MUC1-222ENST00000610468 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
MUC1-222ENST00000610468 NCAPD3P42695 1498 aa27.51■■■□□ 2
MUC1-222ENST00000610468 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
MUC1-222ENST00000610468 SMARCA4P51532 1647 aa27.33■■□□□ 1.97
MUC1-222ENST00000610468 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
MUC1-222ENST00000610468 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
MUC1-222ENST00000610468 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
MUC1-222ENST00000610468 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
MUC1-222ENST00000610468 CUX2O14529 1486 aa27.17■■□□□ 1.94
MUC1-222ENST00000610468 ERCC6Q03468 1493 aa27.14■■□□□ 1.94
MUC1-222ENST00000610468 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
MUC1-222ENST00000610468 BAZ1BQ9UIG0 1483 aaKnown RBP27.11■■□□□ 1.93
MUC1-222ENST00000610468 NESP48681 1621 aa27.01■■□□□ 1.92
MUC1-222ENST00000610468 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.91
MUC1-222ENST00000610468 LAMC3Q9Y6N6 1575 aa26.85■■□□□ 1.89
MUC1-222ENST00000610468 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
MUC1-222ENST00000610468 PDS5BQ9NTI5 1447 aa26.71■■□□□ 1.87
MUC1-222ENST00000610468 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
MUC1-222ENST00000610468 WIZO95785 1651 aa26.61■■□□□ 1.85
MUC1-222ENST00000610468 KIF21AQ7Z4S6 1674 aa26.6■■□□□ 1.85
MUC1-222ENST00000610468 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
MUC1-222ENST00000610468 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
MUC1-222ENST00000610468 WDR62O43379 1518 aa26.43■■□□□ 1.82
MUC1-222ENST00000610468 CFTRP13569 1480 aa26.36■■□□□ 1.81
MUC1-222ENST00000610468 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
MUC1-222ENST00000610468 TOP2AP11388 1531 aaKnown RBP26.35■■□□□ 1.81
MUC1-222ENST00000610468 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
MUC1-222ENST00000610468 URB2Q14146 1524 aaKnown RBP26.12■■□□□ 1.77
MUC1-222ENST00000610468 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
MUC1-222ENST00000610468 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
MUC1-222ENST00000610468 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
MUC1-222ENST00000610468 TRIM41Q8WV44 630 aa25.86■■□□□ 1.73
MUC1-222ENST00000610468 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
MUC1-222ENST00000610468 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
MUC1-222ENST00000610468 ZNF608Q9ULD9 1512 aaPredicted RBP25.79■■□□□ 1.72
MUC1-222ENST00000610468 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
MUC1-222ENST00000610468 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
MUC1-222ENST00000610468 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
MUC1-222ENST00000610468 TARBP1Q13395 1621 aaKnown RBP25.6■■□□□ 1.69
MUC1-222ENST00000610468 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.69
MUC1-222ENST00000610468 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
MUC1-222ENST00000610468 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
MUC1-222ENST00000610468 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
MUC1-222ENST00000610468 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
MUC1-222ENST00000610468 ARHGEF11O15085 1522 aa25.49■■□□□ 1.67
MUC1-222ENST00000610468 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
MUC1-222ENST00000610468 SOGA1O94964 1423 aa25.43■■□□□ 1.66
MUC1-222ENST00000610468 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
MUC1-222ENST00000610468 CUX1P39880 1505 aa25.38■■□□□ 1.65
MUC1-222ENST00000610468 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
MUC1-222ENST00000610468 CHD1O14646 1710 aa25.37■■□□□ 1.65
MUC1-222ENST00000610468 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
MUC1-222ENST00000610468 FBLN2P98095 1184 aa25.3■■□□□ 1.64
MUC1-222ENST00000610468 SNAPC4Q5SXM2 1469 aa25.29■■□□□ 1.64
MUC1-222ENST00000610468 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
MUC1-222ENST00000610468 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
MUC1-222ENST00000610468 GRIN2BQ13224 1484 aa25.24■■□□□ 1.63
MUC1-222ENST00000610468 CYB5RLQ6IPT4 315 aa25.24■■□□□ 1.63
MUC1-222ENST00000610468 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
MUC1-222ENST00000610468 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
MUC1-222ENST00000610468 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
MUC1-222ENST00000610468 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
MUC1-222ENST00000610468 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
MUC1-222ENST00000610468 SYNJ1O43426 1573 aa25.14■■□□□ 1.61
MUC1-222ENST00000610468 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
MUC1-222ENST00000610468 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.6
MUC1-222ENST00000610468 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
MUC1-222ENST00000610468 WRNQ14191 1432 aaPredicted RBP eCLIP25.02■■□□□ 1.6
MUC1-222ENST00000610468 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
MUC1-222ENST00000610468 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
MUC1-222ENST00000610468 TRHP20396 242 aaPredicted RBP24.93■■□□□ 1.58
MUC1-222ENST00000610468 GRIN2AQ12879 1464 aa24.91■■□□□ 1.58
MUC1-222ENST00000610468 ADAMTS12P58397 1594 aa24.88■■□□□ 1.57
MUC1-222ENST00000610468 NUP160Q12769 1436 aa24.87■■□□□ 1.57
MUC1-222ENST00000610468 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
MUC1-222ENST00000610468 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
MUC1-222ENST00000610468 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
MUC1-222ENST00000610468 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
MUC1-222ENST00000610468 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
MUC1-222ENST00000610468 PRG4Q92954 1404 aaPredicted RBP24.57■■□□□ 1.52
MUC1-222ENST00000610468 JPH4Q96JJ6 628 aa24.55■■□□□ 1.52
MUC1-222ENST00000610468 RUSC2Q8N2Y8 1516 aa24.54■■□□□ 1.52
MUC1-222ENST00000610468 IGF1RP08069 1367 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms