RNA–Protein interactions for RNA: ENST00000610434.4

PSMB3-207, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 510 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-207ENST00000610434 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
PSMB3-207ENST00000610434 ABCC9O60706 1549 aa24.67■■□□□ 1.54
PSMB3-207ENST00000610434 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
PSMB3-207ENST00000610434 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
PSMB3-207ENST00000610434 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
PSMB3-207ENST00000610434 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
PSMB3-207ENST00000610434 NACADO15069 1562 aa23.18■■□□□ 1.3
PSMB3-207ENST00000610434 PABPN1Q86U42 306 aaKnown RBP eCLIP23.05■■□□□ 1.28
PSMB3-207ENST00000610434 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
PSMB3-207ENST00000610434 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
PSMB3-207ENST00000610434 BICRAQ9NZM4 1560 aa22.68■■□□□ 1.22
PSMB3-207ENST00000610434 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.2
PSMB3-207ENST00000610434 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
PSMB3-207ENST00000610434 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
PSMB3-207ENST00000610434 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
PSMB3-207ENST00000610434 CC2D2AQ9P2K1 1620 aa22.22■■□□□ 1.15
PSMB3-207ENST00000610434 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
PSMB3-207ENST00000610434 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
PSMB3-207ENST00000610434 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
PSMB3-207ENST00000610434 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
PSMB3-207ENST00000610434 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
PSMB3-207ENST00000610434 ERCC6Q03468 1493 aa21.3■■□□□ 1
PSMB3-207ENST00000610434 SMARCA4P51532 1647 aa21.29■■□□□ 1
PSMB3-207ENST00000610434 SMARCA2P51531 1590 aa21.27■■□□□ 1
PSMB3-207ENST00000610434 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
PSMB3-207ENST00000610434 CUX2O14529 1486 aa21.2■□□□□ 0.98
PSMB3-207ENST00000610434 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
PSMB3-207ENST00000610434 NESP48681 1621 aa21.17■□□□□ 0.98
PSMB3-207ENST00000610434 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
PSMB3-207ENST00000610434 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
PSMB3-207ENST00000610434 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
PSMB3-207ENST00000610434 LAMC3Q9Y6N6 1575 aa20.92■□□□□ 0.94
PSMB3-207ENST00000610434 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
PSMB3-207ENST00000610434 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
PSMB3-207ENST00000610434 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
PSMB3-207ENST00000610434 KIF21AQ7Z4S6 1674 aa20.81■□□□□ 0.92
PSMB3-207ENST00000610434 WIZO95785 1651 aa20.8■□□□□ 0.92
PSMB3-207ENST00000610434 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
PSMB3-207ENST00000610434 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
PSMB3-207ENST00000610434 WDR62O43379 1518 aa20.58■□□□□ 0.89
PSMB3-207ENST00000610434 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
PSMB3-207ENST00000610434 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
PSMB3-207ENST00000610434 CFTRP13569 1480 aa20.53■□□□□ 0.88
PSMB3-207ENST00000610434 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
PSMB3-207ENST00000610434 TRIM41Q8WV44 630 aa20.5■□□□□ 0.87
PSMB3-207ENST00000610434 URB2Q14146 1524 aaKnown RBP20.39■□□□□ 0.85
PSMB3-207ENST00000610434 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
PSMB3-207ENST00000610434 CCDC88BA6NC98 1476 aa20.34■□□□□ 0.85
PSMB3-207ENST00000610434 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
PSMB3-207ENST00000610434 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
PSMB3-207ENST00000610434 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
PSMB3-207ENST00000610434 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
PSMB3-207ENST00000610434 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
PSMB3-207ENST00000610434 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
PSMB3-207ENST00000610434 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.86e-12■■■■■ 50.2
PSMB3-207ENST00000610434 FBLN2P98095 1184 aa20■□□□□ 0.79
PSMB3-207ENST00000610434 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
PSMB3-207ENST00000610434 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
PSMB3-207ENST00000610434 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
PSMB3-207ENST00000610434 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
PSMB3-207ENST00000610434 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
PSMB3-207ENST00000610434 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
PSMB3-207ENST00000610434 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
PSMB3-207ENST00000610434 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
PSMB3-207ENST00000610434 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
PSMB3-207ENST00000610434 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
PSMB3-207ENST00000610434 SOGA1O94964 1423 aa19.91■□□□□ 0.78
PSMB3-207ENST00000610434 CHD1O14646 1710 aa19.86■□□□□ 0.77
PSMB3-207ENST00000610434 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
PSMB3-207ENST00000610434 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
PSMB3-207ENST00000610434 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
PSMB3-207ENST00000610434 CUX1P39880 1505 aa19.78■□□□□ 0.76
PSMB3-207ENST00000610434 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
PSMB3-207ENST00000610434 TRHP20396 242 aaPredicted RBP19.74■□□□□ 0.75
PSMB3-207ENST00000610434 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
PSMB3-207ENST00000610434 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
PSMB3-207ENST00000610434 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
PSMB3-207ENST00000610434 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
PSMB3-207ENST00000610434 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
PSMB3-207ENST00000610434 SYNJ2O15056 1496 aa19.63■□□□□ 0.73
PSMB3-207ENST00000610434 SYNJ1O43426 1573 aa19.62■□□□□ 0.73
PSMB3-207ENST00000610434 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
PSMB3-207ENST00000610434 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
PSMB3-207ENST00000610434 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
PSMB3-207ENST00000610434 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.72
PSMB3-207ENST00000610434 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
PSMB3-207ENST00000610434 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
PSMB3-207ENST00000610434 TOP2BQ02880 1626 aa19.42■□□□□ 0.7
PSMB3-207ENST00000610434 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
PSMB3-207ENST00000610434 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
PSMB3-207ENST00000610434 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
PSMB3-207ENST00000610434 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
PSMB3-207ENST00000610434 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
PSMB3-207ENST00000610434 NUP160Q12769 1436 aa19.35■□□□□ 0.69
PSMB3-207ENST00000610434 ERICH3Q5RHP9 1530 aa19.3■□□□□ 0.68
PSMB3-207ENST00000610434 JPH4Q96JJ6 628 aa19.27■□□□□ 0.68
PSMB3-207ENST00000610434 PRG4Q92954 1404 aaPredicted RBP19.25■□□□□ 0.67
PSMB3-207ENST00000610434 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
PSMB3-207ENST00000610434 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
PSMB3-207ENST00000610434 IGF1RP08069 1367 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 616.6 ms