RNA–Protein interactions for RNA: ENST00000610330.1

KHDC1-206, Transcript of KH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHDC1, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-206ENST00000610330 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.3
KHDC1-206ENST00000610330 ABCC9O60706 1549 aa21.01■□□□□ 0.95
KHDC1-206ENST00000610330 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
KHDC1-206ENST00000610330 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
KHDC1-206ENST00000610330 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
KHDC1-206ENST00000610330 NACADO15069 1562 aa19.87■□□□□ 0.77
KHDC1-206ENST00000610330 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
KHDC1-206ENST00000610330 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
KHDC1-206ENST00000610330 BICRAQ9NZM4 1560 aa19.51■□□□□ 0.71
KHDC1-206ENST00000610330 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
KHDC1-206ENST00000610330 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
KHDC1-206ENST00000610330 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
KHDC1-206ENST00000610330 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
KHDC1-206ENST00000610330 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
KHDC1-206ENST00000610330 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
KHDC1-206ENST00000610330 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
KHDC1-206ENST00000610330 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
KHDC1-206ENST00000610330 SCRIBQ14160 1630 aa18.87■□□□□ 0.61
KHDC1-206ENST00000610330 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
KHDC1-206ENST00000610330 CUX2O14529 1486 aa18.42■□□□□ 0.54
KHDC1-206ENST00000610330 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
KHDC1-206ENST00000610330 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
KHDC1-206ENST00000610330 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
KHDC1-206ENST00000610330 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
KHDC1-206ENST00000610330 ERCC6Q03468 1493 aa18.14■□□□□ 0.5
KHDC1-206ENST00000610330 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
KHDC1-206ENST00000610330 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
KHDC1-206ENST00000610330 THOC2Q8NI27 1593 aaKnown RBP18.03■□□□□ 0.48
KHDC1-206ENST00000610330 NESP48681 1621 aa17.99■□□□□ 0.47
KHDC1-206ENST00000610330 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
KHDC1-206ENST00000610330 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
KHDC1-206ENST00000610330 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
KHDC1-206ENST00000610330 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
KHDC1-206ENST00000610330 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
KHDC1-206ENST00000610330 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.44
KHDC1-206ENST00000610330 WDR62O43379 1518 aa17.73■□□□□ 0.43
KHDC1-206ENST00000610330 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
KHDC1-206ENST00000610330 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
KHDC1-206ENST00000610330 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
KHDC1-206ENST00000610330 CFTRP13569 1480 aa17.51■□□□□ 0.39
KHDC1-206ENST00000610330 WIZO95785 1651 aa17.48■□□□□ 0.39
KHDC1-206ENST00000610330 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
KHDC1-206ENST00000610330 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
KHDC1-206ENST00000610330 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
KHDC1-206ENST00000610330 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
KHDC1-206ENST00000610330 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
KHDC1-206ENST00000610330 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
KHDC1-206ENST00000610330 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
KHDC1-206ENST00000610330 RIMBP3CA6NJZ7 1639 aa17.23■□□□□ 0.35
KHDC1-206ENST00000610330 RIMBP3BA6NNM3 1639 aa17.23■□□□□ 0.35
KHDC1-206ENST00000610330 RIMBP3Q9UFD9 1639 aa17.23■□□□□ 0.35
KHDC1-206ENST00000610330 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
KHDC1-206ENST00000610330 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
KHDC1-206ENST00000610330 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
KHDC1-206ENST00000610330 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
KHDC1-206ENST00000610330 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
KHDC1-206ENST00000610330 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
KHDC1-206ENST00000610330 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
KHDC1-206ENST00000610330 DNMBPQ6XZF7 1577 aa17.07■□□□□ 0.32
KHDC1-206ENST00000610330 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
KHDC1-206ENST00000610330 ARAP1Q96P48 1450 aa17■□□□□ 0.31
KHDC1-206ENST00000610330 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
KHDC1-206ENST00000610330 CHD1O14646 1710 aa16.96■□□□□ 0.3
KHDC1-206ENST00000610330 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
KHDC1-206ENST00000610330 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.3
KHDC1-206ENST00000610330 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
KHDC1-206ENST00000610330 CYB5RLQ6IPT4 315 aa16.85■□□□□ 0.29
KHDC1-206ENST00000610330 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
KHDC1-206ENST00000610330 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
KHDC1-206ENST00000610330 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
KHDC1-206ENST00000610330 SOGA1O94964 1423 aa16.78■□□□□ 0.28
KHDC1-206ENST00000610330 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
KHDC1-206ENST00000610330 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
KHDC1-206ENST00000610330 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
KHDC1-206ENST00000610330 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
KHDC1-206ENST00000610330 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
KHDC1-206ENST00000610330 CUX1P39880 1505 aa16.73■□□□□ 0.27
KHDC1-206ENST00000610330 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
KHDC1-206ENST00000610330 FBLN2P98095 1184 aa16.65■□□□□ 0.26
KHDC1-206ENST00000610330 ABCA5Q8WWZ7 1642 aa16.65■□□□□ 0.26
KHDC1-206ENST00000610330 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
KHDC1-206ENST00000610330 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
KHDC1-206ENST00000610330 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
KHDC1-206ENST00000610330 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
KHDC1-206ENST00000610330 NUP160Q12769 1436 aa16.57■□□□□ 0.24
KHDC1-206ENST00000610330 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
KHDC1-206ENST00000610330 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
KHDC1-206ENST00000610330 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
KHDC1-206ENST00000610330 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
KHDC1-206ENST00000610330 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
KHDC1-206ENST00000610330 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
KHDC1-206ENST00000610330 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
KHDC1-206ENST00000610330 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
KHDC1-206ENST00000610330 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
KHDC1-206ENST00000610330 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
KHDC1-206ENST00000610330 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
KHDC1-206ENST00000610330 KIF13AQ9H1H9 1805 aa16.37■□□□□ 0.21
KHDC1-206ENST00000610330 MAPKBP1O60336 1514 aa16.34■□□□□ 0.21
KHDC1-206ENST00000610330 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
KHDC1-206ENST00000610330 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms