RNA–Protein interactions for RNA: ENST00000610289.2

PRAMEF28P-201, Transcript of PRAME family member 28, pseudogene, humanhuman

BASIC

Gene PRAMEF28P, Length 1,450 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF28P-201ENST00000610289 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
PRAMEF28P-201ENST00000610289 ABCC9O60706 1549 aa24.56■■□□□ 1.52
PRAMEF28P-201ENST00000610289 CCDC180Q9P1Z9 1646 aa24.32■■□□□ 1.48
PRAMEF28P-201ENST00000610289 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.32
PRAMEF28P-201ENST00000610289 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
PRAMEF28P-201ENST00000610289 NACADO15069 1562 aa23.09■■□□□ 1.29
PRAMEF28P-201ENST00000610289 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
PRAMEF28P-201ENST00000610289 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
PRAMEF28P-201ENST00000610289 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
PRAMEF28P-201ENST00000610289 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
PRAMEF28P-201ENST00000610289 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
PRAMEF28P-201ENST00000610289 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
PRAMEF28P-201ENST00000610289 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
PRAMEF28P-201ENST00000610289 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
PRAMEF28P-201ENST00000610289 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
PRAMEF28P-201ENST00000610289 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.14
PRAMEF28P-201ENST00000610289 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.13
PRAMEF28P-201ENST00000610289 EIF4G1Q04637 1599 aaKnown RBP22.07■■□□□ 1.12
PRAMEF28P-201ENST00000610289 DNAJC5Q9H3Z4 198 aa21.42■■□□□ 1.02
PRAMEF28P-201ENST00000610289 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
PRAMEF28P-201ENST00000610289 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
PRAMEF28P-201ENST00000610289 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
PRAMEF28P-201ENST00000610289 CUX2O14529 1486 aa21.18■□□□□ 0.98
PRAMEF28P-201ENST00000610289 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
PRAMEF28P-201ENST00000610289 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
PRAMEF28P-201ENST00000610289 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
PRAMEF28P-201ENST00000610289 NESP48681 1621 aa21.08■□□□□ 0.97
PRAMEF28P-201ENST00000610289 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
PRAMEF28P-201ENST00000610289 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
PRAMEF28P-201ENST00000610289 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
PRAMEF28P-201ENST00000610289 MROH2BQ7Z745 1585 aa20.94■□□□□ 0.94
PRAMEF28P-201ENST00000610289 LAMC3Q9Y6N6 1575 aa20.84■□□□□ 0.93
PRAMEF28P-201ENST00000610289 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
PRAMEF28P-201ENST00000610289 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.92
PRAMEF28P-201ENST00000610289 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
PRAMEF28P-201ENST00000610289 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
PRAMEF28P-201ENST00000610289 WIZO95785 1651 aa20.64■□□□□ 0.89
PRAMEF28P-201ENST00000610289 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.88
PRAMEF28P-201ENST00000610289 WDR62O43379 1518 aa20.52■□□□□ 0.88
PRAMEF28P-201ENST00000610289 RSF1Q96T23 1441 aaPredicted RBP20.48■□□□□ 0.87
PRAMEF28P-201ENST00000610289 CEP164Q9UPV0 1460 aa20.47■□□□□ 0.87
PRAMEF28P-201ENST00000610289 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
PRAMEF28P-201ENST00000610289 CFTRP13569 1480 aa20.44■□□□□ 0.86
PRAMEF28P-201ENST00000610289 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
PRAMEF28P-201ENST00000610289 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
PRAMEF28P-201ENST00000610289 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
PRAMEF28P-201ENST00000610289 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
PRAMEF28P-201ENST00000610289 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
PRAMEF28P-201ENST00000610289 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
PRAMEF28P-201ENST00000610289 PRDM2Q13029 1718 aa20.08■□□□□ 0.81
PRAMEF28P-201ENST00000610289 IFT140Q96RY7 1462 aa20.08■□□□□ 0.8
PRAMEF28P-201ENST00000610289 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
PRAMEF28P-201ENST00000610289 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
PRAMEF28P-201ENST00000610289 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
PRAMEF28P-201ENST00000610289 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
PRAMEF28P-201ENST00000610289 RIMBP3Q9UFD9 1639 aa19.94■□□□□ 0.78
PRAMEF28P-201ENST00000610289 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
PRAMEF28P-201ENST00000610289 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.78
PRAMEF28P-201ENST00000610289 EIF4G3O43432 1585 aaKnown RBP19.9■□□□□ 0.78
PRAMEF28P-201ENST00000610289 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
PRAMEF28P-201ENST00000610289 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
PRAMEF28P-201ENST00000610289 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
PRAMEF28P-201ENST00000610289 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.76
PRAMEF28P-201ENST00000610289 FBLN2P98095 1184 aa19.82■□□□□ 0.76
PRAMEF28P-201ENST00000610289 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
PRAMEF28P-201ENST00000610289 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
PRAMEF28P-201ENST00000610289 SOGA1O94964 1423 aa19.78■□□□□ 0.76
PRAMEF28P-201ENST00000610289 CHD1O14646 1710 aa19.76■□□□□ 0.75
PRAMEF28P-201ENST00000610289 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
PRAMEF28P-201ENST00000610289 ARAP1Q96P48 1450 aa19.69■□□□□ 0.74
PRAMEF28P-201ENST00000610289 CUX1P39880 1505 aa19.66■□□□□ 0.74
PRAMEF28P-201ENST00000610289 SNAPC4Q5SXM2 1469 aa19.66■□□□□ 0.74
PRAMEF28P-201ENST00000610289 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
PRAMEF28P-201ENST00000610289 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
PRAMEF28P-201ENST00000610289 WDR97A6NE52 1622 aa19.6■□□□□ 0.73
PRAMEF28P-201ENST00000610289 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
PRAMEF28P-201ENST00000610289 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.73
PRAMEF28P-201ENST00000610289 CLASP1Q7Z460 1538 aa19.57■□□□□ 0.72
PRAMEF28P-201ENST00000610289 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
PRAMEF28P-201ENST00000610289 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
PRAMEF28P-201ENST00000610289 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
PRAMEF28P-201ENST00000610289 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.71
PRAMEF28P-201ENST00000610289 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
PRAMEF28P-201ENST00000610289 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
PRAMEF28P-201ENST00000610289 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
PRAMEF28P-201ENST00000610289 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
PRAMEF28P-201ENST00000610289 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
PRAMEF28P-201ENST00000610289 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
PRAMEF28P-201ENST00000610289 NUP160Q12769 1436 aa19.29■□□□□ 0.68
PRAMEF28P-201ENST00000610289 TOP2BQ02880 1626 aa19.28■□□□□ 0.68
PRAMEF28P-201ENST00000610289 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
PRAMEF28P-201ENST00000610289 FHAD1B1AJZ9 1412 aa19.27■□□□□ 0.67
PRAMEF28P-201ENST00000610289 CEP170Q5SW79 1584 aa19.26■□□□□ 0.67
PRAMEF28P-201ENST00000610289 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
PRAMEF28P-201ENST00000610289 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
PRAMEF28P-201ENST00000610289 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
PRAMEF28P-201ENST00000610289 JPH4Q96JJ6 628 aa19.15■□□□□ 0.66
PRAMEF28P-201ENST00000610289 PRG4Q92954 1404 aaPredicted RBP19.13■□□□□ 0.65
PRAMEF28P-201ENST00000610289 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
PRAMEF28P-201ENST00000610289 IGF1RP08069 1367 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms