RNA–Protein interactions for RNA: ENST00000610253.5

NPAT-206, Transcript of nuclear protein, coactivator of histone transcription, humanhuman

TSL 2

Gene NPAT, Length 3,959 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAT-206ENST00000610253 NISCHQ9Y2I1 1504 aa12.44□□□□□ -0.42
NPAT-206ENST00000610253 ABCC9O60706 1549 aa11.85□□□□□ -0.51
NPAT-206ENST00000610253 CCDC180Q9P1Z9 1646 aa11.61□□□□□ -0.55
NPAT-206ENST00000610253 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
NPAT-206ENST00000610253 RB1CC1Q8TDY2 1594 aa11.41□□□□□ -0.58
NPAT-206ENST00000610253 DNAJC5BQ9UF47 199 aa11.33□□□□□ -0.6
NPAT-206ENST00000610253 SHROOM4Q9ULL8 1493 aa11.24□□□□□ -0.61
NPAT-206ENST00000610253 NACADO15069 1562 aa11.2□□□□□ -0.62
NPAT-206ENST00000610253 CUX2O14529 1486 aa10.97□□□□□ -0.65
NPAT-206ENST00000610253 MYO15BQ96JP2 1530 aa10.95□□□□□ -0.66
NPAT-206ENST00000610253 CECR2Q9BXF3 1484 aa10.94□□□□□ -0.66
NPAT-206ENST00000610253 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
NPAT-206ENST00000610253 CC2D2AQ9P2K1 1620 aa10.71□□□□□ -0.7
NPAT-206ENST00000610253 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
NPAT-206ENST00000610253 ERCC6Q03468 1493 aa10.63□□□□□ -0.71
NPAT-206ENST00000610253 EIF4G1Q04637 1599 aaKnown RBP10.59□□□□□ -0.71
NPAT-206ENST00000610253 BICRAQ9NZM4 1560 aa10.59□□□□□ -0.71
NPAT-206ENST00000610253 AEBP2Q6ZN18 517 aaPredicted RBP10.58□□□□□ -0.72
NPAT-206ENST00000610253 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
NPAT-206ENST00000610253 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
NPAT-206ENST00000610253 DCAF1Q9Y4B6 1507 aa10.47□□□□□ -0.73
NPAT-206ENST00000610253 CHIC1Q5VXU3 224 aa10.38□□□□□ -0.75
NPAT-206ENST00000610253 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
NPAT-206ENST00000610253 SCRIBQ14160 1630 aa10.28□□□□□ -0.76
NPAT-206ENST00000610253 PDS5BQ9NTI5 1447 aa10.27□□□□□ -0.76
NPAT-206ENST00000610253 NCAPD3P42695 1498 aa10.24□□□□□ -0.77
NPAT-206ENST00000610253 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
NPAT-206ENST00000610253 LAMC3Q9Y6N6 1575 aa10.17□□□□□ -0.78
NPAT-206ENST00000610253 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
NPAT-206ENST00000610253 TRHP20396 242 aaPredicted RBP10.1□□□□□ -0.79
NPAT-206ENST00000610253 ZCCHC6Q5VYS8 1495 aaKnown RBP10.08□□□□□ -0.8
NPAT-206ENST00000610253 MRC2Q9UBG0 1479 aa10.06□□□□□ -0.8
NPAT-206ENST00000610253 BAZ1AQ9NRL2 1556 aaPredicted RBP10.05□□□□□ -0.8
NPAT-206ENST00000610253 THOC2Q8NI27 1593 aaKnown RBP10.04□□□□□ -0.8
NPAT-206ENST00000610253 BAZ1BQ9UIG0 1483 aaKnown RBP9.96□□□□□ -0.82
NPAT-206ENST00000610253 ATAD2BQ9ULI0 1458 aa9.96□□□□□ -0.82
NPAT-206ENST00000610253 WDR62O43379 1518 aa9.93□□□□□ -0.82
NPAT-206ENST00000610253 RSF1Q96T23 1441 aaPredicted RBP9.93□□□□□ -0.82
NPAT-206ENST00000610253 CADPSQ9ULU8 1353 aa9.89□□□□□ -0.83
NPAT-206ENST00000610253 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
NPAT-206ENST00000610253 RIMBP3CA6NJZ7 1639 aa9.87□□□□□ -0.83
NPAT-206ENST00000610253 RIMBP3BA6NNM3 1639 aa9.87□□□□□ -0.83
NPAT-206ENST00000610253 RIMBP3Q9UFD9 1639 aa9.87□□□□□ -0.83
NPAT-206ENST00000610253 ARHGEF11O15085 1522 aa9.85□□□□□ -0.83
NPAT-206ENST00000610253 ABCC8Q09428 1581 aa9.82□□□□□ -0.84
NPAT-206ENST00000610253 CYB5RLQ6IPT4 315 aa9.82□□□□□ -0.84
NPAT-206ENST00000610253 IFT140Q96RY7 1462 aa9.8□□□□□ -0.84
NPAT-206ENST00000610253 NESP48681 1621 aa9.79□□□□□ -0.84
NPAT-206ENST00000610253 ILDR1Q86SU0 546 aaPredicted RBP9.77□□□□□ -0.84
NPAT-206ENST00000610253 PEG3Q9GZU2 1588 aa9.77□□□□□ -0.85
NPAT-206ENST00000610253 SMARCA4P51532 1647 aa9.74□□□□□ -0.85
NPAT-206ENST00000610253 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
NPAT-206ENST00000610253 ERCC6L2Q5T890 1561 aa9.7□□□□□ -0.86
NPAT-206ENST00000610253 FBXO41Q8TF61 875 aa9.69□□□□□ -0.86
NPAT-206ENST00000610253 FANCD2Q9BXW9 1451 aa9.68□□□□□ -0.86
NPAT-206ENST00000610253 WDR97A6NE52 1622 aa9.66□□□□□ -0.86
NPAT-206ENST00000610253 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
NPAT-206ENST00000610253 ARAP1Q96P48 1450 aa9.63□□□□□ -0.87
NPAT-206ENST00000610253 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
NPAT-206ENST00000610253 CFTRP13569 1480 aa9.55□□□□□ -0.88
NPAT-206ENST00000610253 CHMP7Q8WUX9 453 aaPredicted RBP9.53□□□□□ -0.88
NPAT-206ENST00000610253 SOCS7O14512 581 aa9.53□□□□□ -0.88
NPAT-206ENST00000610253 FBLN2P98095 1184 aa9.52□□□□□ -0.89
NPAT-206ENST00000610253 LMTK3Q96Q04 1460 aa9.52□□□□□ -0.89
NPAT-206ENST00000610253 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
NPAT-206ENST00000610253 GAPVD1Q14C86 1478 aa9.47□□□□□ -0.89
NPAT-206ENST00000610253 EHMT2Q96KQ7 1210 aa9.46□□□□□ -0.89
NPAT-206ENST00000610253 URB2Q14146 1524 aaKnown RBP9.44□□□□□ -0.9
NPAT-206ENST00000610253 TOP2BQ02880 1626 aa9.43□□□□□ -0.9
NPAT-206ENST00000610253 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
NPAT-206ENST00000610253 EIF4G3O43432 1585 aaKnown RBP9.4□□□□□ -0.9
NPAT-206ENST00000610253 DNMBPQ6XZF7 1577 aa9.4□□□□□ -0.9
NPAT-206ENST00000610253 MROH2BQ7Z745 1585 aa9.4□□□□□ -0.9
NPAT-206ENST00000610253 SYNJ2O15056 1496 aa9.39□□□□□ -0.91
NPAT-206ENST00000610253 GRIN2BQ13224 1484 aa9.39□□□□□ -0.91
NPAT-206ENST00000610253 CHD1O14646 1710 aa9.38□□□□□ -0.91
NPAT-206ENST00000610253 PRDM2Q13029 1718 aa9.38□□□□□ -0.91
NPAT-206ENST00000610253 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
NPAT-206ENST00000610253 KDM6BO15054 1643 aa9.37□□□□□ -0.91
NPAT-206ENST00000610253 FAM9AQ8IZU1 332 aaPredicted RBP9.36□□□□□ -0.91
NPAT-206ENST00000610253 FAM69CQ0P6D2 419 aa9.33□□□□□ -0.92
NPAT-206ENST00000610253 ABCC10Q5T3U5 1492 aa9.33□□□□□ -0.92
NPAT-206ENST00000610253 TEX14Q8IWB6 1497 aa9.32□□□□□ -0.92
NPAT-206ENST00000610253 ZNF608Q9ULD9 1512 aaPredicted RBP9.32□□□□□ -0.92
NPAT-206ENST00000610253 DISP3Q9P2K9 1392 aa9.31□□□□□ -0.92
NPAT-206ENST00000610253 MAPKBP1O60336 1514 aa9.29□□□□□ -0.92
NPAT-206ENST00000610253 DMRT2Q9Y5R5 561 aa9.29□□□□□ -0.92
NPAT-206ENST00000610253 SOGA1O94964 1423 aa9.29□□□□□ -0.92
NPAT-206ENST00000610253 KDM4FA0A1W2PPD8 638 aa9.29□□□□□ -0.92
NPAT-206ENST00000610253 SNAPC4Q5SXM2 1469 aa9.28□□□□□ -0.92
NPAT-206ENST00000610253 TOP2AP11388 1531 aaKnown RBP9.27□□□□□ -0.93
NPAT-206ENST00000610253 HECW2Q9P2P5 1572 aa9.25□□□□□ -0.93
NPAT-206ENST00000610253 ADGRL1O94910 1474 aa9.25□□□□□ -0.93
NPAT-206ENST00000610253 PHF23Q9BUL5 403 aaPredicted RBP9.25□□□□□ -0.93
NPAT-206ENST00000610253 AQRO60306 1485 aaKnown RBP eCLIP9.25□□□□□ -0.93
NPAT-206ENST00000610253 PLB1Q6P1J6 1458 aa9.23□□□□□ -0.93
NPAT-206ENST00000610253 SLC24A1O60721 1099 aa9.22□□□□□ -0.93
NPAT-206ENST00000610253 TARBP1Q13395 1621 aaKnown RBP9.21□□□□□ -0.93
NPAT-206ENST00000610253 PHLDB1Q86UU1 1377 aa9.21□□□□□ -0.94
NPAT-206ENST00000610253 KIAA0586Q9BVV6 1533 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms