RNA–Protein interactions for RNA: ENST00000610096.1

SYT6-207, Transcript of synaptotagmin 6, humanhuman

TSL 1 (best)

Gene SYT6, Length 1,897 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT6-207ENST00000610096 NISCHQ9Y2I1 1504 aa54.93■■■■■ 6.38
SYT6-207ENST00000610096 CCDC180Q9P1Z9 1646 aa48.32■■■■■ 5.33
SYT6-207ENST00000610096 ABCC9O60706 1549 aa46.56■■■■■ 5.04
SYT6-207ENST00000610096 ZCCHC6Q5VYS8 1495 aaKnown RBP45.98■■■■■ 4.95
SYT6-207ENST00000610096 DCAF8L2P0C7V8 631 aa45.72■■■■■ 4.91
SYT6-207ENST00000610096 DCAF1Q9Y4B6 1507 aa45.32■■■■■ 4.85
SYT6-207ENST00000610096 NACADO15069 1562 aa45.15■■■■■ 4.82
SYT6-207ENST00000610096 MYO15BQ96JP2 1530 aa45.08■■■■■ 4.81
SYT6-207ENST00000610096 RB1CC1Q8TDY2 1594 aa45.01■■■■■ 4.8
SYT6-207ENST00000610096 SCRIBQ14160 1630 aa44.43■■■■■ 4.7
SYT6-207ENST00000610096 SHROOM4Q9ULL8 1493 aa44.35■■■■■ 4.69
SYT6-207ENST00000610096 UNC13AQ9UPW8 1703 aa44.25■■■■■ 4.67
SYT6-207ENST00000610096 BICRAQ9NZM4 1560 aa43.75■■■■■ 4.59
SYT6-207ENST00000610096 PABPN1Q86U42 306 aaKnown RBP eCLIP43.72■■■■■ 4.59
SYT6-207ENST00000610096 CECR2Q9BXF3 1484 aa42.83■■■■■ 4.45
SYT6-207ENST00000610096 EIF4G1Q04637 1599 aaKnown RBP42.48■■■■■ 4.39
SYT6-207ENST00000610096 BAZ1AQ9NRL2 1556 aaPredicted RBP42.47■■■■■ 4.39
SYT6-207ENST00000610096 MROH2BQ7Z745 1585 aa42.47■■■■■ 4.39
SYT6-207ENST00000610096 SMARCA4P51532 1647 aa42.46■■■■■ 4.39
SYT6-207ENST00000610096 RSF1Q96T23 1441 aaPredicted RBP42.28■■■■■ 4.36
SYT6-207ENST00000610096 SUPT5HO00267 1087 aaKnown RBP42.17■■■■■ 4.34
SYT6-207ENST00000610096 WIZO95785 1651 aa42.14■■■■■ 4.34
SYT6-207ENST00000610096 CC2D2AQ9P2K1 1620 aa42.1■■■■■ 4.33
SYT6-207ENST00000610096 ATAD2BQ9ULI0 1458 aa41.93■■■■■ 4.3
SYT6-207ENST00000610096 PEG3Q9GZU2 1588 aa41.9■■■■■ 4.3
SYT6-207ENST00000610096 DNAJC5BQ9UF47 199 aa41.86■■■■■ 4.29
SYT6-207ENST00000610096 SMARCA2P51531 1590 aa41.85■■■■■ 4.29
SYT6-207ENST00000610096 BAZ1BQ9UIG0 1483 aaKnown RBP41.66■■■■■ 4.26
SYT6-207ENST00000610096 NCAPD3P42695 1498 aa41.66■■■■■ 4.26
SYT6-207ENST00000610096 TOP2AP11388 1531 aaKnown RBP41.58■■■■■ 4.25
SYT6-207ENST00000610096 HMGXB3Q12766 1538 aa41.57■■■■■ 4.25
SYT6-207ENST00000610096 CCDC88BA6NC98 1476 aa41.15■■■■■ 4.18
SYT6-207ENST00000610096 NESP48681 1621 aa40.63■■■■■ 4.1
SYT6-207ENST00000610096 CADPSQ9ULU8 1353 aa40.55■■■■■ 4.08
SYT6-207ENST00000610096 CFTRP13569 1480 aa40.52■■■■■ 4.08
SYT6-207ENST00000610096 LAMC3Q9Y6N6 1575 aa40.43■■■■■ 4.06
SYT6-207ENST00000610096 PRDM2Q13029 1718 aa40.38■■■■■ 4.05
SYT6-207ENST00000610096 KIF21AQ7Z4S6 1674 aa40.17■■■■■ 4.02
SYT6-207ENST00000610096 FANCD2Q9BXW9 1451 aa40.16■■■■■ 4.02
SYT6-207ENST00000610096 ABCC8Q09428 1581 aa40.11■■■■■ 4.01
SYT6-207ENST00000610096 PDS5BQ9NTI5 1447 aa40.1■■■■■ 4.01
SYT6-207ENST00000610096 CEP164Q9UPV0 1460 aa39.98■■■■□ 3.99
SYT6-207ENST00000610096 ERCC6Q03468 1493 aa39.96■■■■□ 3.99
SYT6-207ENST00000610096 CHIC1Q5VXU3 224 aa39.83■■■■□ 3.97
SYT6-207ENST00000610096 WRNQ14191 1432 aaPredicted RBP eCLIP39.82■■■■□ 3.97
SYT6-207ENST00000610096 SYNJ1O43426 1573 aa39.79■■■■□ 3.96
SYT6-207ENST00000610096 CUX1P39880 1505 aa39.76■■■■□ 3.96
SYT6-207ENST00000610096 URB2Q14146 1524 aaKnown RBP39.75■■■■□ 3.95
SYT6-207ENST00000610096 MRC2Q9UBG0 1479 aa39.69■■■■□ 3.94
SYT6-207ENST00000610096 THOC2Q8NI27 1593 aaKnown RBP39.68■■■■□ 3.94
SYT6-207ENST00000610096 DNMBPQ6XZF7 1577 aa39.64■■■■□ 3.94
SYT6-207ENST00000610096 TOPBP1Q92547 1522 aa39.64■■■■□ 3.94
SYT6-207ENST00000610096 TOP2BQ02880 1626 aa39.63■■■■□ 3.93
SYT6-207ENST00000610096 TRIM41Q8WV44 630 aa39.62■■■■□ 3.93
SYT6-207ENST00000610096 BIVM-ERCC5R4GMW8 1640 aa39.62■■■■□ 3.93
SYT6-207ENST00000610096 WDR62O43379 1518 aa39.54■■■■□ 3.92
SYT6-207ENST00000610096 FGD5Q6ZNL6 1462 aa39.46■■■■□ 3.91
SYT6-207ENST00000610096 POLA1P09884 1462 aaPredicted RBP39.39■■■■□ 3.9
SYT6-207ENST00000610096 RAD54L2Q9Y4B4 1467 aa39.29■■■■□ 3.88
SYT6-207ENST00000610096 CUX2O14529 1486 aa39.24■■■■□ 3.87
SYT6-207ENST00000610096 SOGA1O94964 1423 aa39.19■■■■□ 3.86
SYT6-207ENST00000610096 TARBP1Q13395 1621 aaKnown RBP39.14■■■■□ 3.86
SYT6-207ENST00000610096 WDR97A6NE52 1622 aa39.09■■■■□ 3.85
SYT6-207ENST00000610096 RUSC2Q8N2Y8 1516 aa39.06■■■■□ 3.84
SYT6-207ENST00000610096 IFT140Q96RY7 1462 aa39.04■■■■□ 3.84
SYT6-207ENST00000610096 ABCA10Q8WWZ4 1543 aa39.02■■■■□ 3.84
SYT6-207ENST00000610096 FAM9AQ8IZU1 332 aaPredicted RBP39■■■■□ 3.83
SYT6-207ENST00000610096 ZNF608Q9ULD9 1512 aaPredicted RBP38.98■■■■□ 3.83
SYT6-207ENST00000610096 TDRD9Q8NDG6 1382 aaKnown RBP38.96■■■■□ 3.83
SYT6-207ENST00000610096 AQRO60306 1485 aaKnown RBP eCLIP38.87■■■■□ 3.81
SYT6-207ENST00000610096 ABCA5Q8WWZ7 1642 aa38.85■■■■□ 3.81
SYT6-207ENST00000610096 KIF27Q86VH2 1401 aa38.85■■■■□ 3.81
SYT6-207ENST00000610096 EIF4G3O43432 1585 aaKnown RBP38.84■■■■□ 3.81
SYT6-207ENST00000610096 GAPVD1Q14C86 1478 aa38.77■■■■□ 3.8
SYT6-207ENST00000610096 PBRM1Q86U86 1689 aa38.72■■■■□ 3.79
SYT6-207ENST00000610096 EEA1Q15075 1411 aa38.67■■■■□ 3.78
SYT6-207ENST00000610096 CSRNP3Q8WYN3 585 aa38.62■■■■□ 3.77
SYT6-207ENST00000610096 IGF1RP08069 1367 aa38.61■■■■□ 3.77
SYT6-207ENST00000610096 EHMT2Q96KQ7 1210 aa38.59■■■■□ 3.77
SYT6-207ENST00000610096 GRIN2BQ13224 1484 aa38.57■■■■□ 3.77
SYT6-207ENST00000610096 ERICH3Q5RHP9 1530 aa38.55■■■■□ 3.76
SYT6-207ENST00000610096 SNAPC4Q5SXM2 1469 aa38.5■■■■□ 3.75
SYT6-207ENST00000610096 CUL7Q14999 1698 aa38.43■■■■□ 3.74
SYT6-207ENST00000610096 ADAMTS12P58397 1594 aa38.42■■■■□ 3.74
SYT6-207ENST00000610096 CARMIL1Q5VZK9 1371 aa38.4■■■■□ 3.74
SYT6-207ENST00000610096 PRXQ9BXM0 1461 aa38.39■■■■□ 3.74
SYT6-207ENST00000610096 LOC105371045A0A1W2PR82 267 aa38.36■■■■□ 3.73
SYT6-207ENST00000610096 RAPGEF2Q9Y4G8 1499 aa38.34■■■■□ 3.73
SYT6-207ENST00000610096 KIF21BO75037 1637 aa38.34■■■■□ 3.73
SYT6-207ENST00000610096 MAGI1Q96QZ7 1491 aaPredicted RBP38.34■■■■□ 3.73
SYT6-207ENST00000610096 FHAD1B1AJZ9 1412 aa38.29■■■■□ 3.72
SYT6-207ENST00000610096 FBLN2P98095 1184 aa38.24■■■■□ 3.71
SYT6-207ENST00000610096 SYNJ2O15056 1496 aa38.22■■■■□ 3.71
SYT6-207ENST00000610096 CHD1O14646 1710 aa38.21■■■■□ 3.71
SYT6-207ENST00000610096 GOLGA3Q08378 1498 aa38.2■■■■□ 3.71
SYT6-207ENST00000610096 CHMP7Q8WUX9 453 aaPredicted RBP38.16■■■■□ 3.7
SYT6-207ENST00000610096 GRIN2AQ12879 1464 aa38.14■■■■□ 3.7
SYT6-207ENST00000610096 UBTFP17480 764 aaKnown RBP38.09■■■■□ 3.69
SYT6-207ENST00000610096 CEP170Q5SW79 1584 aa37.99■■■■□ 3.67
SYT6-207ENST00000610096 CTTNBP2Q8WZ74 1663 aa37.96■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms