RNA–Protein interactions for RNA: ENST00000610048.5

PNLDC1-206, Transcript of PARN like, ribonuclease domain containing 1, humanhuman

TSL 4

Gene PNLDC1, Length 578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1-206ENST00000610048 NISCHQ9Y2I1 1504 aa44.16■■■■■ 4.66
PNLDC1-206ENST00000610048 CCDC180Q9P1Z9 1646 aa39.12■■■■□ 3.85
PNLDC1-206ENST00000610048 ABCC9O60706 1549 aa38.43■■■■□ 3.74
PNLDC1-206ENST00000610048 DCAF8L2P0C7V8 631 aa36.99■■■■□ 3.51
PNLDC1-206ENST00000610048 RB1CC1Q8TDY2 1594 aa36.84■■■■□ 3.49
PNLDC1-206ENST00000610048 NACADO15069 1562 aa36.82■■■■□ 3.48
PNLDC1-206ENST00000610048 ZCCHC6Q5VYS8 1495 aaKnown RBP36.77■■■■□ 3.48
PNLDC1-206ENST00000610048 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
PNLDC1-206ENST00000610048 DCAF1Q9Y4B6 1507 aa36.46■■■■□ 3.43
PNLDC1-206ENST00000610048 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
PNLDC1-206ENST00000610048 PABPN1Q86U42 306 aaKnown RBP eCLIP36■■■■□ 3.35
PNLDC1-206ENST00000610048 BICRAQ9NZM4 1560 aa35.85■■■■□ 3.33
PNLDC1-206ENST00000610048 SCRIBQ14160 1630 aa35.82■■■■□ 3.32
PNLDC1-206ENST00000610048 DNAJC5BQ9UF47 199 aa35.4■■■■□ 3.26
PNLDC1-206ENST00000610048 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
PNLDC1-206ENST00000610048 EIF4G1Q04637 1599 aaKnown RBP34.84■■■■□ 3.17
PNLDC1-206ENST00000610048 CC2D2AQ9P2K1 1620 aa34.71■■■■□ 3.15
PNLDC1-206ENST00000610048 CECR2Q9BXF3 1484 aa34.51■■■■□ 3.11
PNLDC1-206ENST00000610048 SMARCA4P51532 1647 aa34.23■■■■□ 3.07
PNLDC1-206ENST00000610048 BAZ1AQ9NRL2 1556 aaPredicted RBP34.16■■■■□ 3.06
PNLDC1-206ENST00000610048 MROH2BQ7Z745 1585 aa34.1■■■■□ 3.05
PNLDC1-206ENST00000610048 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
PNLDC1-206ENST00000610048 NCAPD3P42695 1498 aa34.04■■■■□ 3.04
PNLDC1-206ENST00000610048 SMARCA2P51531 1590 aa33.94■■■■□ 3.02
PNLDC1-206ENST00000610048 PEG3Q9GZU2 1588 aa33.87■■■■□ 3.01
PNLDC1-206ENST00000610048 HMGXB3Q12766 1538 aa33.8■■■■□ 3
PNLDC1-206ENST00000610048 BAZ1BQ9UIG0 1483 aaKnown RBP33.75■■■□□ 2.99
PNLDC1-206ENST00000610048 RSF1Q96T23 1441 aaPredicted RBP33.71■■■□□ 2.99
PNLDC1-206ENST00000610048 WIZO95785 1651 aa33.71■■■□□ 2.99
PNLDC1-206ENST00000610048 NESP48681 1621 aa33.3■■■□□ 2.92
PNLDC1-206ENST00000610048 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
PNLDC1-206ENST00000610048 LAMC3Q9Y6N6 1575 aa33.06■■■□□ 2.88
PNLDC1-206ENST00000610048 CADPSQ9ULU8 1353 aa33.06■■■□□ 2.88
PNLDC1-206ENST00000610048 ERCC6Q03468 1493 aa33.02■■■□□ 2.88
PNLDC1-206ENST00000610048 CCDC88BA6NC98 1476 aa32.99■■■□□ 2.87
PNLDC1-206ENST00000610048 SUPT5HO00267 1087 aaKnown RBP32.95■■■□□ 2.87
PNLDC1-206ENST00000610048 PDS5BQ9NTI5 1447 aa32.86■■■□□ 2.85
PNLDC1-206ENST00000610048 CFTRP13569 1480 aa32.86■■■□□ 2.85
PNLDC1-206ENST00000610048 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
PNLDC1-206ENST00000610048 THOC2Q8NI27 1593 aaKnown RBP32.68■■■□□ 2.82
PNLDC1-206ENST00000610048 FANCD2Q9BXW9 1451 aa32.67■■■□□ 2.82
PNLDC1-206ENST00000610048 CUX2O14529 1486 aa32.62■■■□□ 2.81
PNLDC1-206ENST00000610048 CEP164Q9UPV0 1460 aa32.58■■■□□ 2.81
PNLDC1-206ENST00000610048 MRC2Q9UBG0 1479 aa32.54■■■□□ 2.8
PNLDC1-206ENST00000610048 PRDM2Q13029 1718 aa32.5■■■□□ 2.79
PNLDC1-206ENST00000610048 WDR62O43379 1518 aa32.42■■■□□ 2.78
PNLDC1-206ENST00000610048 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.78
PNLDC1-206ENST00000610048 TOPBP1Q92547 1522 aa32.16■■■□□ 2.74
PNLDC1-206ENST00000610048 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
PNLDC1-206ENST00000610048 ABCC8Q09428 1581 aa32.06■■■□□ 2.72
PNLDC1-206ENST00000610048 CUX1P39880 1505 aa31.96■■■□□ 2.71
PNLDC1-206ENST00000610048 IFT140Q96RY7 1462 aa31.9■■■□□ 2.7
PNLDC1-206ENST00000610048 POLA1P09884 1462 aaPredicted RBP31.89■■■□□ 2.7
PNLDC1-206ENST00000610048 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
PNLDC1-206ENST00000610048 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
PNLDC1-206ENST00000610048 RAD54L2Q9Y4B4 1467 aa31.82■■■□□ 2.68
PNLDC1-206ENST00000610048 TARBP1Q13395 1621 aaKnown RBP31.81■■■□□ 2.68
PNLDC1-206ENST00000610048 SOGA1O94964 1423 aa31.78■■■□□ 2.68
PNLDC1-206ENST00000610048 DNAJC5Q9H3Z4 198 aa31.73■■■□□ 2.67
PNLDC1-206ENST00000610048 WRNQ14191 1432 aaPredicted RBP eCLIP31.73■■■□□ 2.67
PNLDC1-206ENST00000610048 AQRO60306 1485 aaKnown RBP eCLIP31.7■■■□□ 2.66
PNLDC1-206ENST00000610048 SYNJ1O43426 1573 aa31.68■■■□□ 2.66
PNLDC1-206ENST00000610048 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
PNLDC1-206ENST00000610048 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.65
PNLDC1-206ENST00000610048 TOP2BQ02880 1626 aa31.63■■■□□ 2.65
PNLDC1-206ENST00000610048 BIVM-ERCC5R4GMW8 1640 aa31.62■■■□□ 2.65
PNLDC1-206ENST00000610048 WDR97A6NE52 1622 aa31.5■■■□□ 2.63
PNLDC1-206ENST00000610048 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
PNLDC1-206ENST00000610048 OSCARQ8IYS5 282 aa31.38■■■□□ 2.61
PNLDC1-206ENST00000610048 GAPVD1Q14C86 1478 aa31.38■■■□□ 2.61
PNLDC1-206ENST00000610048 GRIN2BQ13224 1484 aa31.35■■■□□ 2.61
PNLDC1-206ENST00000610048 ABCA5Q8WWZ7 1642 aa31.35■■■□□ 2.61
PNLDC1-206ENST00000610048 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
PNLDC1-206ENST00000610048 FBLN2P98095 1184 aa31.29■■■□□ 2.6
PNLDC1-206ENST00000610048 PBRM1Q86U86 1689 aa31.26■■■□□ 2.6
PNLDC1-206ENST00000610048 CHD1O14646 1710 aa31.24■■■□□ 2.59
PNLDC1-206ENST00000610048 MAGI1Q96QZ7 1491 aaPredicted RBP31.23■■■□□ 2.59
PNLDC1-206ENST00000610048 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
PNLDC1-206ENST00000610048 SYNJ2O15056 1496 aa31.14■■■□□ 2.57
PNLDC1-206ENST00000610048 ERICH3Q5RHP9 1530 aa31.08■■■□□ 2.57
PNLDC1-206ENST00000610048 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
PNLDC1-206ENST00000610048 ADAMTS12P58397 1594 aa31.04■■■□□ 2.56
PNLDC1-206ENST00000610048 KIF27Q86VH2 1401 aa31.03■■■□□ 2.56
PNLDC1-206ENST00000610048 IGF1RP08069 1367 aa31.01■■■□□ 2.55
PNLDC1-206ENST00000610048 FHAD1B1AJZ9 1412 aa31■■■□□ 2.55
PNLDC1-206ENST00000610048 GRIN2AQ12879 1464 aa30.96■■■□□ 2.55
PNLDC1-206ENST00000610048 RUSC2Q8N2Y8 1516 aa30.93■■■□□ 2.54
PNLDC1-206ENST00000610048 CLASP1Q7Z460 1538 aa30.92■■■□□ 2.54
PNLDC1-206ENST00000610048 RIMBP3CA6NJZ7 1639 aa30.85■■■□□ 2.53
PNLDC1-206ENST00000610048 RIMBP3BA6NNM3 1639 aa30.85■■■□□ 2.53
PNLDC1-206ENST00000610048 RIMBP3Q9UFD9 1639 aa30.85■■■□□ 2.53
PNLDC1-206ENST00000610048 ARHGEF11O15085 1522 aa30.84■■■□□ 2.53
PNLDC1-206ENST00000610048 CEP170Q5SW79 1584 aa30.83■■■□□ 2.53
PNLDC1-206ENST00000610048 NUP160Q12769 1436 aa30.83■■■□□ 2.53
PNLDC1-206ENST00000610048 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
PNLDC1-206ENST00000610048 CHIC1Q5VXU3 224 aa30.78■■■□□ 2.52
PNLDC1-206ENST00000610048 CUL7Q14999 1698 aa30.76■■■□□ 2.51
PNLDC1-206ENST00000610048 CYB5RLQ6IPT4 315 aa30.64■■■□□ 2.5
PNLDC1-206ENST00000610048 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
PNLDC1-206ENST00000610048 ERCC6L2Q5T890 1561 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms