RNA–Protein interactions for RNA: ENST00000610023.1

PDE4C-217, Transcript of phosphodiesterase 4C, humanhuman

TSL 4

Gene PDE4C, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-217ENST00000610023 NISCHQ9Y2I1 1504 aa52.29■■■■■ 5.96
PDE4C-217ENST00000610023 CCDC180Q9P1Z9 1646 aa46.7■■■■■ 5.07
PDE4C-217ENST00000610023 ABCC9O60706 1549 aa45.79■■■■■ 4.92
PDE4C-217ENST00000610023 RB1CC1Q8TDY2 1594 aa44.01■■■■■ 4.64
PDE4C-217ENST00000610023 NACADO15069 1562 aa43.88■■■■■ 4.62
PDE4C-217ENST00000610023 DCAF8L2P0C7V8 631 aa43.63■■■■■ 4.57
PDE4C-217ENST00000610023 ZCCHC6Q5VYS8 1495 aaKnown RBP43.56■■■■■ 4.56
PDE4C-217ENST00000610023 MYO15BQ96JP2 1530 aa43.55■■■■■ 4.56
PDE4C-217ENST00000610023 DCAF1Q9Y4B6 1507 aa43.29■■■■■ 4.52
PDE4C-217ENST00000610023 UNC13AQ9UPW8 1703 aa43.04■■■■■ 4.48
PDE4C-217ENST00000610023 BICRAQ9NZM4 1560 aa42.65■■■■■ 4.42
PDE4C-217ENST00000610023 PABPN1Q86U42 306 aaKnown RBP eCLIP42.65■■■■■ 4.42
PDE4C-217ENST00000610023 SCRIBQ14160 1630 aa42.55■■■■■ 4.4
PDE4C-217ENST00000610023 SHROOM4Q9ULL8 1493 aa42.26■■■■■ 4.36
PDE4C-217ENST00000610023 DNAJC5BQ9UF47 199 aa42.08■■■■■ 4.33
PDE4C-217ENST00000610023 EIF4G1Q04637 1599 aaKnown RBP41.57■■■■■ 4.25
PDE4C-217ENST00000610023 CC2D2AQ9P2K1 1620 aa41.44■■■■■ 4.22
PDE4C-217ENST00000610023 CECR2Q9BXF3 1484 aa41.17■■■■■ 4.18
PDE4C-217ENST00000610023 SMARCA4P51532 1647 aa40.67■■■■■ 4.1
PDE4C-217ENST00000610023 BAZ1AQ9NRL2 1556 aaPredicted RBP40.59■■■■■ 4.09
PDE4C-217ENST00000610023 ATAD2BQ9ULI0 1458 aa40.45■■■■■ 4.07
PDE4C-217ENST00000610023 SMARCA2P51531 1590 aa40.44■■■■■ 4.06
PDE4C-217ENST00000610023 NCAPD3P42695 1498 aa40.44■■■■■ 4.06
PDE4C-217ENST00000610023 HMGXB3Q12766 1538 aa40.32■■■■■ 4.04
PDE4C-217ENST00000610023 MROH2BQ7Z745 1585 aa40.29■■■■■ 4.04
PDE4C-217ENST00000610023 PEG3Q9GZU2 1588 aa40.27■■■■■ 4.04
PDE4C-217ENST00000610023 BAZ1BQ9UIG0 1483 aaKnown RBP40.14■■■■■ 4.02
PDE4C-217ENST00000610023 WIZO95785 1651 aa39.87■■■■□ 3.97
PDE4C-217ENST00000610023 RSF1Q96T23 1441 aaPredicted RBP39.71■■■■□ 3.95
PDE4C-217ENST00000610023 NESP48681 1621 aa39.55■■■■□ 3.92
PDE4C-217ENST00000610023 ERCC6Q03468 1493 aa39.52■■■■□ 3.92
PDE4C-217ENST00000610023 LAMC3Q9Y6N6 1575 aa39.49■■■■□ 3.91
PDE4C-217ENST00000610023 TOP2AP11388 1531 aaKnown RBP39.46■■■■□ 3.91
PDE4C-217ENST00000610023 CADPSQ9ULU8 1353 aa39.23■■■■□ 3.87
PDE4C-217ENST00000610023 CUX2O14529 1486 aa39.19■■■■□ 3.86
PDE4C-217ENST00000610023 PDS5BQ9NTI5 1447 aa39.17■■■■□ 3.86
PDE4C-217ENST00000610023 KIF21AQ7Z4S6 1674 aa39.16■■■■□ 3.86
PDE4C-217ENST00000610023 THOC2Q8NI27 1593 aaKnown RBP39.1■■■■□ 3.85
PDE4C-217ENST00000610023 CFTRP13569 1480 aa38.98■■■■□ 3.83
PDE4C-217ENST00000610023 CCDC88BA6NC98 1476 aa38.92■■■■□ 3.82
PDE4C-217ENST00000610023 CEP164Q9UPV0 1460 aa38.85■■■■□ 3.81
PDE4C-217ENST00000610023 FANCD2Q9BXW9 1451 aa38.84■■■■□ 3.81
PDE4C-217ENST00000610023 MRC2Q9UBG0 1479 aa38.82■■■■□ 3.81
PDE4C-217ENST00000610023 PRDM2Q13029 1718 aa38.82■■■■□ 3.8
PDE4C-217ENST00000610023 WDR62O43379 1518 aa38.72■■■■□ 3.79
PDE4C-217ENST00000610023 SUPT5HO00267 1087 aaKnown RBP38.47■■■■□ 3.75
PDE4C-217ENST00000610023 URB2Q14146 1524 aaKnown RBP38.46■■■■□ 3.75
PDE4C-217ENST00000610023 TOPBP1Q92547 1522 aa38.2■■■■□ 3.71
PDE4C-217ENST00000610023 DNMBPQ6XZF7 1577 aa38.18■■■■□ 3.7
PDE4C-217ENST00000610023 ABCC8Q09428 1581 aa38.17■■■■□ 3.7
PDE4C-217ENST00000610023 DNAJC5Q9H3Z4 198 aa38.1■■■■□ 3.69
PDE4C-217ENST00000610023 IFT140Q96RY7 1462 aa38.02■■■■□ 3.68
PDE4C-217ENST00000610023 POLA1P09884 1462 aaPredicted RBP37.86■■■■□ 3.65
PDE4C-217ENST00000610023 ZNF608Q9ULD9 1512 aaPredicted RBP37.83■■■■□ 3.65
PDE4C-217ENST00000610023 CUX1P39880 1505 aa37.82■■■■□ 3.65
PDE4C-217ENST00000610023 TARBP1Q13395 1621 aaKnown RBP37.82■■■■□ 3.64
PDE4C-217ENST00000610023 EIF4G3O43432 1585 aaKnown RBP37.77■■■■□ 3.64
PDE4C-217ENST00000610023 FGD5Q6ZNL6 1462 aa37.74■■■■□ 3.63
PDE4C-217ENST00000610023 RAD54L2Q9Y4B4 1467 aa37.65■■■■□ 3.62
PDE4C-217ENST00000610023 SOGA1O94964 1423 aa37.64■■■■□ 3.62
PDE4C-217ENST00000610023 WDR97A6NE52 1622 aa37.57■■■■□ 3.6
PDE4C-217ENST00000610023 AQRO60306 1485 aaKnown RBP eCLIP37.56■■■■□ 3.6
PDE4C-217ENST00000610023 BIVM-ERCC5R4GMW8 1640 aa37.5■■■■□ 3.59
PDE4C-217ENST00000610023 WRNQ14191 1432 aaPredicted RBP eCLIP37.49■■■■□ 3.59
PDE4C-217ENST00000610023 TOP2BQ02880 1626 aa37.47■■■■□ 3.59
PDE4C-217ENST00000610023 SYNJ1O43426 1573 aa37.45■■■■□ 3.59
PDE4C-217ENST00000610023 TDRD9Q8NDG6 1382 aaKnown RBP37.44■■■■□ 3.58
PDE4C-217ENST00000610023 OSCARQ8IYS5 282 aa37.39■■■■□ 3.58
PDE4C-217ENST00000610023 ABCA10Q8WWZ4 1543 aa37.36■■■■□ 3.57
PDE4C-217ENST00000610023 CHD1O14646 1710 aa37.33■■■■□ 3.57
PDE4C-217ENST00000610023 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
PDE4C-217ENST00000610023 PBRM1Q86U86 1689 aa37.28■■■■□ 3.56
PDE4C-217ENST00000610023 GRIN2BQ13224 1484 aa37.28■■■■□ 3.56
PDE4C-217ENST00000610023 SNAPC4Q5SXM2 1469 aa37.28■■■■□ 3.56
PDE4C-217ENST00000610023 GAPVD1Q14C86 1478 aa37.24■■■■□ 3.55
PDE4C-217ENST00000610023 MAGI1Q96QZ7 1491 aaPredicted RBP37.23■■■■□ 3.55
PDE4C-217ENST00000610023 FBLN2P98095 1184 aa37.12■■■■□ 3.53
PDE4C-217ENST00000610023 SYNJ2O15056 1496 aa37.07■■■■□ 3.53
PDE4C-217ENST00000610023 CHMP7Q8WUX9 453 aaPredicted RBP36.99■■■■□ 3.51
PDE4C-217ENST00000610023 RIMBP3CA6NJZ7 1639 aa36.96■■■■□ 3.51
PDE4C-217ENST00000610023 RIMBP3BA6NNM3 1639 aa36.96■■■■□ 3.51
PDE4C-217ENST00000610023 RIMBP3Q9UFD9 1639 aa36.96■■■■□ 3.51
PDE4C-217ENST00000610023 ADAMTS12P58397 1594 aa36.96■■■■□ 3.51
PDE4C-217ENST00000610023 ERICH3Q5RHP9 1530 aa36.93■■■■□ 3.5
PDE4C-217ENST00000610023 ARHGEF11O15085 1522 aa36.92■■■■□ 3.5
PDE4C-217ENST00000610023 CLASP1Q7Z460 1538 aa36.9■■■■□ 3.5
PDE4C-217ENST00000610023 GRIN2AQ12879 1464 aa36.82■■■■□ 3.48
PDE4C-217ENST00000610023 FHAD1B1AJZ9 1412 aa36.81■■■■□ 3.48
PDE4C-217ENST00000610023 TRIM41Q8WV44 630 aa36.79■■■■□ 3.48
PDE4C-217ENST00000610023 KIF27Q86VH2 1401 aa36.71■■■■□ 3.47
PDE4C-217ENST00000610023 CEP170Q5SW79 1584 aa36.66■■■■□ 3.46
PDE4C-217ENST00000610023 NUP160Q12769 1436 aa36.65■■■■□ 3.46
PDE4C-217ENST00000610023 ARAP1Q96P48 1450 aa36.61■■■■□ 3.45
PDE4C-217ENST00000610023 CUL7Q14999 1698 aa36.61■■■■□ 3.45
PDE4C-217ENST00000610023 IGF1RP08069 1367 aa36.52■■■■□ 3.44
PDE4C-217ENST00000610023 CYB5RLQ6IPT4 315 aa36.45■■■■□ 3.43
PDE4C-217ENST00000610023 SHROOM2Q13796 1616 aa36.45■■■■□ 3.42
PDE4C-217ENST00000610023 RUSC2Q8N2Y8 1516 aa36.43■■■■□ 3.42
PDE4C-217ENST00000610023 ERCC6L2Q5T890 1561 aa36.34■■■■□ 3.41
PDE4C-217ENST00000610023 CARMIL1Q5VZK9 1371 aa36.33■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms