RNA–Protein interactions for RNA: ENST00000609796.1

SIRPB2-208, Transcript of signal regulatory protein beta 2, humanhuman

TSL 3

Gene SIRPB2, Length 1,111 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB2-208ENST00000609796 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
SIRPB2-208ENST00000609796 ABCC9O60706 1549 aa25.42■■□□□ 1.66
SIRPB2-208ENST00000609796 CCDC180Q9P1Z9 1646 aa25.19■■□□□ 1.62
SIRPB2-208ENST00000609796 DNAJC5BQ9UF47 199 aa24.11■■□□□ 1.45
SIRPB2-208ENST00000609796 RB1CC1Q8TDY2 1594 aa24.07■■□□□ 1.44
SIRPB2-208ENST00000609796 NACADO15069 1562 aa23.87■■□□□ 1.41
SIRPB2-208ENST00000609796 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
SIRPB2-208ENST00000609796 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.38
SIRPB2-208ENST00000609796 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
SIRPB2-208ENST00000609796 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
SIRPB2-208ENST00000609796 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.34
SIRPB2-208ENST00000609796 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
SIRPB2-208ENST00000609796 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
SIRPB2-208ENST00000609796 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
SIRPB2-208ENST00000609796 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
SIRPB2-208ENST00000609796 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
SIRPB2-208ENST00000609796 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
SIRPB2-208ENST00000609796 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
SIRPB2-208ENST00000609796 DNAJC5Q9H3Z4 198 aa22.18■■□□□ 1.14
SIRPB2-208ENST00000609796 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
SIRPB2-208ENST00000609796 ATAD2BQ9ULI0 1458 aa22■■□□□ 1.11
SIRPB2-208ENST00000609796 CUX2O14529 1486 aa21.91■■□□□ 1.1
SIRPB2-208ENST00000609796 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
SIRPB2-208ENST00000609796 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
SIRPB2-208ENST00000609796 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
SIRPB2-208ENST00000609796 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
SIRPB2-208ENST00000609796 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
SIRPB2-208ENST00000609796 NESP48681 1621 aa21.82■■□□□ 1.08
SIRPB2-208ENST00000609796 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
SIRPB2-208ENST00000609796 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
SIRPB2-208ENST00000609796 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
SIRPB2-208ENST00000609796 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
SIRPB2-208ENST00000609796 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
SIRPB2-208ENST00000609796 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
SIRPB2-208ENST00000609796 WIZO95785 1651 aa21.47■■□□□ 1.03
SIRPB2-208ENST00000609796 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
SIRPB2-208ENST00000609796 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
SIRPB2-208ENST00000609796 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
SIRPB2-208ENST00000609796 MRC2Q9UBG0 1479 aa21.28■■□□□ 1
SIRPB2-208ENST00000609796 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
SIRPB2-208ENST00000609796 WDR62O43379 1518 aa21.23■□□□□ 0.99
SIRPB2-208ENST00000609796 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
SIRPB2-208ENST00000609796 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
SIRPB2-208ENST00000609796 CFTRP13569 1480 aa21.13■□□□□ 0.97
SIRPB2-208ENST00000609796 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
SIRPB2-208ENST00000609796 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
SIRPB2-208ENST00000609796 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
SIRPB2-208ENST00000609796 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
SIRPB2-208ENST00000609796 PRDM2Q13029 1718 aa20.83■□□□□ 0.92
SIRPB2-208ENST00000609796 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
SIRPB2-208ENST00000609796 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
SIRPB2-208ENST00000609796 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
SIRPB2-208ENST00000609796 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
SIRPB2-208ENST00000609796 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
SIRPB2-208ENST00000609796 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
SIRPB2-208ENST00000609796 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
SIRPB2-208ENST00000609796 ABCC8Q09428 1581 aa20.64■□□□□ 0.9
SIRPB2-208ENST00000609796 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
SIRPB2-208ENST00000609796 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
SIRPB2-208ENST00000609796 AQRO60306 1485 aaKnown RBP eCLIP20.59■□□□□ 0.89
SIRPB2-208ENST00000609796 ARHGEF11O15085 1522 aa20.58■□□□□ 0.89
SIRPB2-208ENST00000609796 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
SIRPB2-208ENST00000609796 POLA1P09884 1462 aaPredicted RBP20.51■□□□□ 0.87
SIRPB2-208ENST00000609796 CYB5RLQ6IPT4 315 aa20.49■□□□□ 0.87
SIRPB2-208ENST00000609796 CHD1O14646 1710 aa20.49■□□□□ 0.87
SIRPB2-208ENST00000609796 RAD54L2Q9Y4B4 1467 aa20.48■□□□□ 0.87
SIRPB2-208ENST00000609796 FBLN2P98095 1184 aa20.47■□□□□ 0.87
SIRPB2-208ENST00000609796 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
SIRPB2-208ENST00000609796 SOGA1O94964 1423 aa20.44■□□□□ 0.86
SIRPB2-208ENST00000609796 CUX1P39880 1505 aa20.42■□□□□ 0.86
SIRPB2-208ENST00000609796 FGD5Q6ZNL6 1462 aa20.38■□□□□ 0.85
SIRPB2-208ENST00000609796 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
SIRPB2-208ENST00000609796 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
SIRPB2-208ENST00000609796 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
SIRPB2-208ENST00000609796 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
SIRPB2-208ENST00000609796 WDR97A6NE52 1622 aa20.27■□□□□ 0.83
SIRPB2-208ENST00000609796 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
SIRPB2-208ENST00000609796 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
SIRPB2-208ENST00000609796 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
SIRPB2-208ENST00000609796 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
SIRPB2-208ENST00000609796 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
SIRPB2-208ENST00000609796 SYNJ1O43426 1573 aa20.19■□□□□ 0.82
SIRPB2-208ENST00000609796 GAPVD1Q14C86 1478 aa20.16■□□□□ 0.82
SIRPB2-208ENST00000609796 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
SIRPB2-208ENST00000609796 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
SIRPB2-208ENST00000609796 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
SIRPB2-208ENST00000609796 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
SIRPB2-208ENST00000609796 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
SIRPB2-208ENST00000609796 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
SIRPB2-208ENST00000609796 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
SIRPB2-208ENST00000609796 NUP160Q12769 1436 aa19.93■□□□□ 0.78
SIRPB2-208ENST00000609796 ADAMTS12P58397 1594 aa19.93■□□□□ 0.78
SIRPB2-208ENST00000609796 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
SIRPB2-208ENST00000609796 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
SIRPB2-208ENST00000609796 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
SIRPB2-208ENST00000609796 SHROOM2Q13796 1616 aa19.85■□□□□ 0.77
SIRPB2-208ENST00000609796 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
SIRPB2-208ENST00000609796 JPH4Q96JJ6 628 aa19.78■□□□□ 0.76
SIRPB2-208ENST00000609796 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
SIRPB2-208ENST00000609796 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms