RNA–Protein interactions for RNA: ENST00000609300.1

LINC00261-203, long intergenic non-protein coding RNA 261, humanhuman

TSL 3

Gene LINC00261, Length 457 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00261-203ENST00000609300 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
LINC00261-203ENST00000609300 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
LINC00261-203ENST00000609300 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
LINC00261-203ENST00000609300 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.83
LINC00261-203ENST00000609300 ABCC9O60706 1549 aa19.94■□□□□ 0.78
LINC00261-203ENST00000609300 PHF23Q9BUL5 403 aaPredicted RBP19.6■□□□□ 0.73
LINC00261-203ENST00000609300 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
LINC00261-203ENST00000609300 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
LINC00261-203ENST00000609300 NACADO15069 1562 aa18.98■□□□□ 0.63
LINC00261-203ENST00000609300 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
LINC00261-203ENST00000609300 MYO15BQ96JP2 1530 aa18.82■□□□□ 0.6
LINC00261-203ENST00000609300 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
LINC00261-203ENST00000609300 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
LINC00261-203ENST00000609300 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
LINC00261-203ENST00000609300 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
LINC00261-203ENST00000609300 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
LINC00261-203ENST00000609300 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC00261-203ENST00000609300 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
LINC00261-203ENST00000609300 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
LINC00261-203ENST00000609300 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
LINC00261-203ENST00000609300 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
LINC00261-203ENST00000609300 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
LINC00261-203ENST00000609300 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
LINC00261-203ENST00000609300 FOXD1Q16676 465 aa17.94■□□□□ 0.46
LINC00261-203ENST00000609300 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
LINC00261-203ENST00000609300 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
LINC00261-203ENST00000609300 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
LINC00261-203ENST00000609300 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
LINC00261-203ENST00000609300 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
LINC00261-203ENST00000609300 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
LINC00261-203ENST00000609300 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
LINC00261-203ENST00000609300 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
LINC00261-203ENST00000609300 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
LINC00261-203ENST00000609300 MSH5O43196 834 aa17.31■□□□□ 0.36
LINC00261-203ENST00000609300 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
LINC00261-203ENST00000609300 WIZO95785 1651 aa17.27■□□□□ 0.36
LINC00261-203ENST00000609300 NESP48681 1621 aa17.26■□□□□ 0.35
LINC00261-203ENST00000609300 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
LINC00261-203ENST00000609300 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
LINC00261-203ENST00000609300 ADRA2BP18089 450 aa17.16■□□□□ 0.34
LINC00261-203ENST00000609300 KIF21AQ7Z4S6 1674 aa17.14■□□□□ 0.33
LINC00261-203ENST00000609300 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
LINC00261-203ENST00000609300 ERCC6Q03468 1493 aa17.09■□□□□ 0.33
LINC00261-203ENST00000609300 CUX2O14529 1486 aa17.08■□□□□ 0.32
LINC00261-203ENST00000609300 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
LINC00261-203ENST00000609300 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.32
LINC00261-203ENST00000609300 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
LINC00261-203ENST00000609300 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
LINC00261-203ENST00000609300 WDR62O43379 1518 aa16.87■□□□□ 0.29
LINC00261-203ENST00000609300 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
LINC00261-203ENST00000609300 CFTRP13569 1480 aa16.85■□□□□ 0.29
LINC00261-203ENST00000609300 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
LINC00261-203ENST00000609300 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
LINC00261-203ENST00000609300 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
LINC00261-203ENST00000609300 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
LINC00261-203ENST00000609300 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
LINC00261-203ENST00000609300 PIAS4Q8N2W9 510 aaPredicted RBP16.73■□□□□ 0.27
LINC00261-203ENST00000609300 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
LINC00261-203ENST00000609300 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
LINC00261-203ENST00000609300 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
LINC00261-203ENST00000609300 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
LINC00261-203ENST00000609300 TARBP1Q13395 1621 aaKnown RBP16.47■□□□□ 0.23
LINC00261-203ENST00000609300 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.23
LINC00261-203ENST00000609300 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
LINC00261-203ENST00000609300 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
LINC00261-203ENST00000609300 CUX1P39880 1505 aa16.39■□□□□ 0.21
LINC00261-203ENST00000609300 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
LINC00261-203ENST00000609300 ABCC8Q09428 1581 aa16.36■□□□□ 0.21
LINC00261-203ENST00000609300 CHD1O14646 1710 aa16.33■□□□□ 0.21
LINC00261-203ENST00000609300 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
LINC00261-203ENST00000609300 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
LINC00261-203ENST00000609300 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■□□□ 12.7
LINC00261-203ENST00000609300 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
LINC00261-203ENST00000609300 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
LINC00261-203ENST00000609300 RIMBP3CA6NJZ7 1639 aa16.22■□□□□ 0.19
LINC00261-203ENST00000609300 RIMBP3BA6NNM3 1639 aa16.22■□□□□ 0.19
LINC00261-203ENST00000609300 RIMBP3Q9UFD9 1639 aa16.22■□□□□ 0.19
LINC00261-203ENST00000609300 BIVM-ERCC5R4GMW8 1640 aa16.21■□□□□ 0.19
LINC00261-203ENST00000609300 ABCA5Q8WWZ7 1642 aa16.2■□□□□ 0.18
LINC00261-203ENST00000609300 SYNJ1O43426 1573 aa16.2■□□□□ 0.18
LINC00261-203ENST00000609300 SOGA1O94964 1423 aa16.17■□□□□ 0.18
LINC00261-203ENST00000609300 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
LINC00261-203ENST00000609300 TOP2BQ02880 1626 aa16.15■□□□□ 0.18
LINC00261-203ENST00000609300 TDRD9Q8NDG6 1382 aaKnown RBP16.14■□□□□ 0.17
LINC00261-203ENST00000609300 ARHGEF11O15085 1522 aa16.14■□□□□ 0.17
LINC00261-203ENST00000609300 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
LINC00261-203ENST00000609300 CLASP1Q7Z460 1538 aa16.12■□□□□ 0.17
LINC00261-203ENST00000609300 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
LINC00261-203ENST00000609300 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
LINC00261-203ENST00000609300 MAGI1Q96QZ7 1491 aaPredicted RBP16.07■□□□□ 0.16
LINC00261-203ENST00000609300 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
LINC00261-203ENST00000609300 ADAMTS12P58397 1594 aa16.05■□□□□ 0.16
LINC00261-203ENST00000609300 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
LINC00261-203ENST00000609300 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
LINC00261-203ENST00000609300 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
LINC00261-203ENST00000609300 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
LINC00261-203ENST00000609300 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
LINC00261-203ENST00000609300 KCNA4P22459 653 aa15.99■□□□□ 0.15
LINC00261-203ENST00000609300 CEP170Q5SW79 1584 aa15.96■□□□□ 0.14
LINC00261-203ENST00000609300 ERCC6L2Q5T890 1561 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms