RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
CTCFL-221ENST00000608903 CCDC180Q9P1Z9 1646 aa23.64■■□□□ 1.38
CTCFL-221ENST00000608903 ABCC9O60706 1549 aa22.7■■□□□ 1.22
CTCFL-221ENST00000608903 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
CTCFL-221ENST00000608903 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
CTCFL-221ENST00000608903 DCAF1Q9Y4B6 1507 aa22.29■■□□□ 1.16
CTCFL-221ENST00000608903 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
CTCFL-221ENST00000608903 NACADO15069 1562 aa22.1■■□□□ 1.13
CTCFL-221ENST00000608903 RB1CC1Q8TDY2 1594 aa21.97■■□□□ 1.11
CTCFL-221ENST00000608903 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
CTCFL-221ENST00000608903 SCRIBQ14160 1630 aa21.74■■□□□ 1.07
CTCFL-221ENST00000608903 UNC13AQ9UPW8 1703 aa21.6■■□□□ 1.05
CTCFL-221ENST00000608903 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
CTCFL-221ENST00000608903 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
CTCFL-221ENST00000608903 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
CTCFL-221ENST00000608903 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
CTCFL-221ENST00000608903 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
CTCFL-221ENST00000608903 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.92
CTCFL-221ENST00000608903 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
CTCFL-221ENST00000608903 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
CTCFL-221ENST00000608903 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
CTCFL-221ENST00000608903 WIZO95785 1651 aa20.69■□□□□ 0.9
CTCFL-221ENST00000608903 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
CTCFL-221ENST00000608903 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
CTCFL-221ENST00000608903 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
CTCFL-221ENST00000608903 SMARCA2P51531 1590 aa20.49■□□□□ 0.87
CTCFL-221ENST00000608903 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
CTCFL-221ENST00000608903 TOP2AP11388 1531 aaKnown RBP20.42■□□□□ 0.86
CTCFL-221ENST00000608903 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
CTCFL-221ENST00000608903 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
CTCFL-221ENST00000608903 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
CTCFL-221ENST00000608903 CCDC88BA6NC98 1476 aa20.25■□□□□ 0.83
CTCFL-221ENST00000608903 CFTRP13569 1480 aa19.89■□□□□ 0.77
CTCFL-221ENST00000608903 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
CTCFL-221ENST00000608903 NESP48681 1621 aa19.87■□□□□ 0.77
CTCFL-221ENST00000608903 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
CTCFL-221ENST00000608903 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
CTCFL-221ENST00000608903 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
CTCFL-221ENST00000608903 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
CTCFL-221ENST00000608903 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
CTCFL-221ENST00000608903 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
CTCFL-221ENST00000608903 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.73
CTCFL-221ENST00000608903 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.73
CTCFL-221ENST00000608903 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
CTCFL-221ENST00000608903 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
CTCFL-221ENST00000608903 CUX1P39880 1505 aa19.54■□□□□ 0.72
CTCFL-221ENST00000608903 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
CTCFL-221ENST00000608903 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
CTCFL-221ENST00000608903 URB2Q14146 1524 aaKnown RBP19.47■□□□□ 0.71
CTCFL-221ENST00000608903 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
CTCFL-221ENST00000608903 TOPBP1Q92547 1522 aa19.42■□□□□ 0.7
CTCFL-221ENST00000608903 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
CTCFL-221ENST00000608903 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
CTCFL-221ENST00000608903 MRC2Q9UBG0 1479 aa19.39■□□□□ 0.69
CTCFL-221ENST00000608903 THOC2Q8NI27 1593 aaKnown RBP19.35■□□□□ 0.69
CTCFL-221ENST00000608903 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
CTCFL-221ENST00000608903 WDR62O43379 1518 aa19.31■□□□□ 0.68
CTCFL-221ENST00000608903 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
CTCFL-221ENST00000608903 SOGA1O94964 1423 aa19.3■□□□□ 0.68
CTCFL-221ENST00000608903 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
CTCFL-221ENST00000608903 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.68
CTCFL-221ENST00000608903 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
CTCFL-221ENST00000608903 CUX2O14529 1486 aa19.23■□□□□ 0.67
CTCFL-221ENST00000608903 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
CTCFL-221ENST00000608903 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
CTCFL-221ENST00000608903 WDR97A6NE52 1622 aa19.14■□□□□ 0.65
CTCFL-221ENST00000608903 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
CTCFL-221ENST00000608903 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
CTCFL-221ENST00000608903 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
CTCFL-221ENST00000608903 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
CTCFL-221ENST00000608903 EEA1Q15075 1411 aa19.08■□□□□ 0.64
CTCFL-221ENST00000608903 ZNF608Q9ULD9 1512 aaPredicted RBP19.07■□□□□ 0.64
CTCFL-221ENST00000608903 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
CTCFL-221ENST00000608903 ABCA5Q8WWZ7 1642 aa19.04■□□□□ 0.64
CTCFL-221ENST00000608903 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.643e-6■■■□□ 17.6
CTCFL-221ENST00000608903 IGF1RP08069 1367 aa19.03■□□□□ 0.64
CTCFL-221ENST00000608903 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
CTCFL-221ENST00000608903 EHMT2Q96KQ7 1210 aa19■□□□□ 0.63
CTCFL-221ENST00000608903 EIF4G3O43432 1585 aaKnown RBP18.95■□□□□ 0.62
CTCFL-221ENST00000608903 PRXQ9BXM0 1461 aa18.94■□□□□ 0.62
CTCFL-221ENST00000608903 PBRM1Q86U86 1689 aa18.91■□□□□ 0.62
CTCFL-221ENST00000608903 ERICH3Q5RHP9 1530 aa18.9■□□□□ 0.62
CTCFL-221ENST00000608903 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
CTCFL-221ENST00000608903 KIF21BO75037 1637 aa18.9■□□□□ 0.62
CTCFL-221ENST00000608903 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.62
CTCFL-221ENST00000608903 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
CTCFL-221ENST00000608903 GOLGA3Q08378 1498 aa18.83■□□□□ 0.61
CTCFL-221ENST00000608903 CUL7Q14999 1698 aa18.83■□□□□ 0.6
CTCFL-221ENST00000608903 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
CTCFL-221ENST00000608903 ADAMTS12P58397 1594 aa18.8■□□□□ 0.6
CTCFL-221ENST00000608903 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
CTCFL-221ENST00000608903 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
CTCFL-221ENST00000608903 MAGI1Q96QZ7 1491 aaPredicted RBP18.75■□□□□ 0.59
CTCFL-221ENST00000608903 TNIKQ9UKE5 1360 aa18.74■□□□□ 0.59
CTCFL-221ENST00000608903 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
CTCFL-221ENST00000608903 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
CTCFL-221ENST00000608903 FBLN2P98095 1184 aa18.65■□□□□ 0.58
CTCFL-221ENST00000608903 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
CTCFL-221ENST00000608903 CEP162Q5TB80 1403 aa18.62■□□□□ 0.57
CTCFL-221ENST00000608903 CHD1O14646 1710 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms