RNA–Protein interactions for RNA: ENST00000608844.1

PCMTD2-205, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2, humanhuman

TSL 4

Gene PCMTD2, Length 528 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD2-205ENST00000608844 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
PCMTD2-205ENST00000608844 ABCC9O60706 1549 aa25.83■■□□□ 1.72
PCMTD2-205ENST00000608844 CCDC180Q9P1Z9 1646 aa25.29■■□□□ 1.64
PCMTD2-205ENST00000608844 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
PCMTD2-205ENST00000608844 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
PCMTD2-205ENST00000608844 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
PCMTD2-205ENST00000608844 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
PCMTD2-205ENST00000608844 NACADO15069 1562 aa23.99■■□□□ 1.43
PCMTD2-205ENST00000608844 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
PCMTD2-205ENST00000608844 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
PCMTD2-205ENST00000608844 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
PCMTD2-205ENST00000608844 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
PCMTD2-205ENST00000608844 ZCCHC6Q5VYS8 1495 aaKnown RBP23.23■■□□□ 1.31
PCMTD2-205ENST00000608844 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
PCMTD2-205ENST00000608844 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
PCMTD2-205ENST00000608844 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
PCMTD2-205ENST00000608844 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.29
PCMTD2-205ENST00000608844 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
PCMTD2-205ENST00000608844 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
PCMTD2-205ENST00000608844 CUX2O14529 1486 aa22.22■■□□□ 1.15
PCMTD2-205ENST00000608844 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
PCMTD2-205ENST00000608844 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
PCMTD2-205ENST00000608844 NESP48681 1621 aa22.13■■□□□ 1.13
PCMTD2-205ENST00000608844 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
PCMTD2-205ENST00000608844 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
PCMTD2-205ENST00000608844 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
PCMTD2-205ENST00000608844 SMARCA2P51531 1590 aa21.95■■□□□ 1.11
PCMTD2-205ENST00000608844 THOC2Q8NI27 1593 aaKnown RBP21.89■■□□□ 1.09
PCMTD2-205ENST00000608844 BAZ1BQ9UIG0 1483 aaKnown RBP21.87■■□□□ 1.09
PCMTD2-205ENST00000608844 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
PCMTD2-205ENST00000608844 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
PCMTD2-205ENST00000608844 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
PCMTD2-205ENST00000608844 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
PCMTD2-205ENST00000608844 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
PCMTD2-205ENST00000608844 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
PCMTD2-205ENST00000608844 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
PCMTD2-205ENST00000608844 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
PCMTD2-205ENST00000608844 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
PCMTD2-205ENST00000608844 WIZO95785 1651 aa21.49■■□□□ 1.03
PCMTD2-205ENST00000608844 WDR62O43379 1518 aa21.45■■□□□ 1.02
PCMTD2-205ENST00000608844 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
PCMTD2-205ENST00000608844 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
PCMTD2-205ENST00000608844 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
PCMTD2-205ENST00000608844 CFTRP13569 1480 aa21.2■□□□□ 0.98
PCMTD2-205ENST00000608844 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
PCMTD2-205ENST00000608844 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
PCMTD2-205ENST00000608844 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.96
PCMTD2-205ENST00000608844 RIMBP3CA6NJZ7 1639 aa21.05■□□□□ 0.96
PCMTD2-205ENST00000608844 RIMBP3BA6NNM3 1639 aa21.05■□□□□ 0.96
PCMTD2-205ENST00000608844 RIMBP3Q9UFD9 1639 aa21.05■□□□□ 0.96
PCMTD2-205ENST00000608844 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
PCMTD2-205ENST00000608844 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
PCMTD2-205ENST00000608844 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
PCMTD2-205ENST00000608844 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
PCMTD2-205ENST00000608844 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
PCMTD2-205ENST00000608844 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
PCMTD2-205ENST00000608844 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
PCMTD2-205ENST00000608844 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
PCMTD2-205ENST00000608844 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
PCMTD2-205ENST00000608844 CHD1O14646 1710 aa20.78■□□□□ 0.92
PCMTD2-205ENST00000608844 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
PCMTD2-205ENST00000608844 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
PCMTD2-205ENST00000608844 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
PCMTD2-205ENST00000608844 FBLN2P98095 1184 aa20.7■□□□□ 0.9
PCMTD2-205ENST00000608844 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
PCMTD2-205ENST00000608844 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
PCMTD2-205ENST00000608844 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
PCMTD2-205ENST00000608844 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
PCMTD2-205ENST00000608844 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
PCMTD2-205ENST00000608844 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
PCMTD2-205ENST00000608844 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
PCMTD2-205ENST00000608844 SOGA1O94964 1423 aa20.53■□□□□ 0.88
PCMTD2-205ENST00000608844 CLASP1Q7Z460 1538 aa20.49■□□□□ 0.87
PCMTD2-205ENST00000608844 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
PCMTD2-205ENST00000608844 CUX1P39880 1505 aa20.44■□□□□ 0.86
PCMTD2-205ENST00000608844 CHMP7Q8WUX9 453 aaPredicted RBP20.41■□□□□ 0.86
PCMTD2-205ENST00000608844 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
PCMTD2-205ENST00000608844 MAGI1Q96QZ7 1491 aaPredicted RBP20.35■□□□□ 0.85
PCMTD2-205ENST00000608844 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
PCMTD2-205ENST00000608844 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
PCMTD2-205ENST00000608844 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
PCMTD2-205ENST00000608844 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
PCMTD2-205ENST00000608844 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
PCMTD2-205ENST00000608844 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
PCMTD2-205ENST00000608844 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
PCMTD2-205ENST00000608844 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
PCMTD2-205ENST00000608844 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
PCMTD2-205ENST00000608844 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
PCMTD2-205ENST00000608844 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
PCMTD2-205ENST00000608844 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
PCMTD2-205ENST00000608844 NUP160Q12769 1436 aa20.05■□□□□ 0.8
PCMTD2-205ENST00000608844 SHROOM2Q13796 1616 aa20.01■□□□□ 0.79
PCMTD2-205ENST00000608844 KIF13AQ9H1H9 1805 aa20■□□□□ 0.79
PCMTD2-205ENST00000608844 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
PCMTD2-205ENST00000608844 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
PCMTD2-205ENST00000608844 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
PCMTD2-205ENST00000608844 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
PCMTD2-205ENST00000608844 PRG4Q92954 1404 aaPredicted RBP19.92■□□□□ 0.78
PCMTD2-205ENST00000608844 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
PCMTD2-205ENST00000608844 JPH4Q96JJ6 628 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms