RNA–Protein interactions for RNA: ENST00000608654.5

LINC00877-209, long intergenic non-protein coding RNA 877, humanhuman

TSL 5

Gene LINC00877, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00877-209ENST00000608654 NISCHQ9Y2I1 1504 aa42.54■■■■■ 4.4
LINC00877-209ENST00000608654 ABCC9O60706 1549 aa38.68■■■■□ 3.78
LINC00877-209ENST00000608654 CCDC180Q9P1Z9 1646 aa38.43■■■■□ 3.74
LINC00877-209ENST00000608654 DNAJC5BQ9UF47 199 aa36.82■■■■□ 3.48
LINC00877-209ENST00000608654 RB1CC1Q8TDY2 1594 aa36.69■■■■□ 3.46
LINC00877-209ENST00000608654 NACADO15069 1562 aa36.37■■■■□ 3.41
LINC00877-209ENST00000608654 UNC13AQ9UPW8 1703 aa36.04■■■■□ 3.36
LINC00877-209ENST00000608654 PABPN1Q86U42 306 aaKnown RBP eCLIP35.88■■■■□ 3.33
LINC00877-209ENST00000608654 MYO15BQ96JP2 1530 aa35.83■■■■□ 3.33
LINC00877-209ENST00000608654 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
LINC00877-209ENST00000608654 DCAF8L2P0C7V8 631 aa35.71■■■■□ 3.31
LINC00877-209ENST00000608654 SHROOM4Q9ULL8 1493 aa35.21■■■■□ 3.23
LINC00877-209ENST00000608654 DCAF1Q9Y4B6 1507 aa35.19■■■■□ 3.22
LINC00877-209ENST00000608654 ZCCHC6Q5VYS8 1495 aaKnown RBP35.18■■■■□ 3.22
LINC00877-209ENST00000608654 CC2D2AQ9P2K1 1620 aa35.02■■■■□ 3.2
LINC00877-209ENST00000608654 CECR2Q9BXF3 1484 aa34.91■■■■□ 3.18
LINC00877-209ENST00000608654 EIF4G1Q04637 1599 aaKnown RBP34.85■■■■□ 3.17
LINC00877-209ENST00000608654 SCRIBQ14160 1630 aa34.83■■■■□ 3.17
LINC00877-209ENST00000608654 DNAJC5Q9H3Z4 198 aa34.08■■■■□ 3.05
LINC00877-209ENST00000608654 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
LINC00877-209ENST00000608654 CUX2O14529 1486 aa33.6■■■□□ 2.97
LINC00877-209ENST00000608654 ATAD2BQ9ULI0 1458 aa33.41■■■□□ 2.94
LINC00877-209ENST00000608654 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
LINC00877-209ENST00000608654 ERCC6Q03468 1493 aa33.32■■■□□ 2.92
LINC00877-209ENST00000608654 SMARCA4P51532 1647 aa33.28■■■□□ 2.92
LINC00877-209ENST00000608654 SMARCA2P51531 1590 aa33.26■■■□□ 2.92
LINC00877-209ENST00000608654 NESP48681 1621 aa33.18■■■□□ 2.9
LINC00877-209ENST00000608654 PEG3Q9GZU2 1588 aa33.06■■■□□ 2.88
LINC00877-209ENST00000608654 THOC2Q8NI27 1593 aaKnown RBP33.02■■■□□ 2.88
LINC00877-209ENST00000608654 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
LINC00877-209ENST00000608654 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
LINC00877-209ENST00000608654 LAMC3Q9Y6N6 1575 aa32.9■■■□□ 2.86
LINC00877-209ENST00000608654 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
LINC00877-209ENST00000608654 MROH2BQ7Z745 1585 aa32.77■■■□□ 2.84
LINC00877-209ENST00000608654 PDS5BQ9NTI5 1447 aa32.61■■■□□ 2.81
LINC00877-209ENST00000608654 CADPSQ9ULU8 1353 aa32.49■■■□□ 2.79
LINC00877-209ENST00000608654 WDR62O43379 1518 aa32.43■■■□□ 2.78
LINC00877-209ENST00000608654 MRC2Q9UBG0 1479 aa32.42■■■□□ 2.78
LINC00877-209ENST00000608654 WIZO95785 1651 aa32.34■■■□□ 2.77
LINC00877-209ENST00000608654 TRIM41Q8WV44 630 aa32.16■■■□□ 2.74
LINC00877-209ENST00000608654 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
LINC00877-209ENST00000608654 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
LINC00877-209ENST00000608654 CFTRP13569 1480 aa32.1■■■□□ 2.73
LINC00877-209ENST00000608654 URB2Q14146 1524 aaKnown RBP31.95■■■□□ 2.7
LINC00877-209ENST00000608654 RSF1Q96T23 1441 aaPredicted RBP31.91■■■□□ 2.7
LINC00877-209ENST00000608654 TOP2AP11388 1531 aaKnown RBP31.9■■■□□ 2.7
LINC00877-209ENST00000608654 OSCARQ8IYS5 282 aa31.86■■■□□ 2.69
LINC00877-209ENST00000608654 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
LINC00877-209ENST00000608654 RIMBP3CA6NJZ7 1639 aa31.64■■■□□ 2.66
LINC00877-209ENST00000608654 RIMBP3BA6NNM3 1639 aa31.64■■■□□ 2.66
LINC00877-209ENST00000608654 RIMBP3Q9UFD9 1639 aa31.64■■■□□ 2.66
LINC00877-209ENST00000608654 ZNF608Q9ULD9 1512 aaPredicted RBP31.59■■■□□ 2.65
LINC00877-209ENST00000608654 IFT140Q96RY7 1462 aa31.56■■■□□ 2.64
LINC00877-209ENST00000608654 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
LINC00877-209ENST00000608654 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
LINC00877-209ENST00000608654 ARHGEF11O15085 1522 aa31.48■■■□□ 2.63
LINC00877-209ENST00000608654 EIF4G3O43432 1585 aaKnown RBP31.41■■■□□ 2.62
LINC00877-209ENST00000608654 ABCC8Q09428 1581 aa31.34■■■□□ 2.61
LINC00877-209ENST00000608654 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
LINC00877-209ENST00000608654 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
LINC00877-209ENST00000608654 CHD1O14646 1710 aa31.28■■■□□ 2.6
LINC00877-209ENST00000608654 AQRO60306 1485 aaKnown RBP eCLIP31.2■■■□□ 2.58
LINC00877-209ENST00000608654 ARAP1Q96P48 1450 aa31.16■■■□□ 2.58
LINC00877-209ENST00000608654 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
LINC00877-209ENST00000608654 CYB5RLQ6IPT4 315 aa31.1■■■□□ 2.57
LINC00877-209ENST00000608654 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
LINC00877-209ENST00000608654 CLASP1Q7Z460 1538 aa30.96■■■□□ 2.55
LINC00877-209ENST00000608654 WDR97A6NE52 1622 aa30.95■■■□□ 2.55
LINC00877-209ENST00000608654 SOGA1O94964 1423 aa30.91■■■□□ 2.54
LINC00877-209ENST00000608654 TDRD9Q8NDG6 1382 aaKnown RBP30.9■■■□□ 2.54
LINC00877-209ENST00000608654 FBLN2P98095 1184 aa30.86■■■□□ 2.53
LINC00877-209ENST00000608654 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
LINC00877-209ENST00000608654 FGD5Q6ZNL6 1462 aa30.85■■■□□ 2.53
LINC00877-209ENST00000608654 CUX1P39880 1505 aa30.81■■■□□ 2.52
LINC00877-209ENST00000608654 MAGI1Q96QZ7 1491 aaPredicted RBP30.8■■■□□ 2.52
LINC00877-209ENST00000608654 TRHP20396 242 aaPredicted RBP30.79■■■□□ 2.52
LINC00877-209ENST00000608654 SYNJ1O43426 1573 aa30.76■■■□□ 2.52
LINC00877-209ENST00000608654 GRIN2BQ13224 1484 aa30.72■■■□□ 2.51
LINC00877-209ENST00000608654 SYNJ2O15056 1496 aa30.7■■■□□ 2.5
LINC00877-209ENST00000608654 PBRM1Q86U86 1689 aa30.65■■■□□ 2.5
LINC00877-209ENST00000608654 CHMP7Q8WUX9 453 aaPredicted RBP30.64■■■□□ 2.5
LINC00877-209ENST00000608654 ABCA5Q8WWZ7 1642 aa30.57■■■□□ 2.48
LINC00877-209ENST00000608654 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
LINC00877-209ENST00000608654 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
LINC00877-209ENST00000608654 ERCC6L2Q5T890 1561 aa30.42■■■□□ 2.46
LINC00877-209ENST00000608654 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
LINC00877-209ENST00000608654 NUP160Q12769 1436 aa30.33■■■□□ 2.45
LINC00877-209ENST00000608654 ADAMTS12P58397 1594 aa30.32■■■□□ 2.45
LINC00877-209ENST00000608654 CEP170Q5SW79 1584 aa30.32■■■□□ 2.45
LINC00877-209ENST00000608654 SHROOM2Q13796 1616 aa30.32■■■□□ 2.44
LINC00877-209ENST00000608654 BIVM-ERCC5R4GMW8 1640 aa30.24■■■□□ 2.43
LINC00877-209ENST00000608654 TOP2BQ02880 1626 aa30.2■■■□□ 2.43
LINC00877-209ENST00000608654 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.42
LINC00877-209ENST00000608654 AEBP2Q6ZN18 517 aaPredicted RBP30.17■■■□□ 2.42
LINC00877-209ENST00000608654 KIF13AQ9H1H9 1805 aa30.16■■■□□ 2.42
LINC00877-209ENST00000608654 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
LINC00877-209ENST00000608654 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
LINC00877-209ENST00000608654 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
LINC00877-209ENST00000608654 RUSC2Q8N2Y8 1516 aa29.92■■■□□ 2.38
LINC00877-209ENST00000608654 JPH4Q96JJ6 628 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms