RNA–Protein interactions for RNA: ENST00000608615.1

AP000345.2-201, humanhuman

TSL 3 BASIC

Gene AP000345.2, Length 1,081 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000345.2-201ENST00000608615 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
AP000345.2-201ENST00000608615 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
AP000345.2-201ENST00000608615 AEBP2Q6ZN18 517 aaPredicted RBP27.4■■□□□ 1.98
AP000345.2-201ENST00000608615 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
AP000345.2-201ENST00000608615 ABCC9O60706 1549 aa24.93■■□□□ 1.58
AP000345.2-201ENST00000608615 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
AP000345.2-201ENST00000608615 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
AP000345.2-201ENST00000608615 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
AP000345.2-201ENST00000608615 NACADO15069 1562 aa23.63■■□□□ 1.37
AP000345.2-201ENST00000608615 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
AP000345.2-201ENST00000608615 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
AP000345.2-201ENST00000608615 MYO15BQ96JP2 1530 aa23.24■■□□□ 1.31
AP000345.2-201ENST00000608615 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
AP000345.2-201ENST00000608615 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
AP000345.2-201ENST00000608615 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
AP000345.2-201ENST00000608615 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
AP000345.2-201ENST00000608615 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
AP000345.2-201ENST00000608615 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.26
AP000345.2-201ENST00000608615 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
AP000345.2-201ENST00000608615 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
AP000345.2-201ENST00000608615 CC2D2AQ9P2K1 1620 aa22.5■■□□□ 1.19
AP000345.2-201ENST00000608615 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
AP000345.2-201ENST00000608615 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
AP000345.2-201ENST00000608615 SMARCA4P51532 1647 aa21.81■■□□□ 1.08
AP000345.2-201ENST00000608615 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
AP000345.2-201ENST00000608615 BAZ1AQ9NRL2 1556 aaPredicted RBP21.75■■□□□ 1.07
AP000345.2-201ENST00000608615 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
AP000345.2-201ENST00000608615 ATAD2BQ9ULI0 1458 aa21.73■■□□□ 1.07
AP000345.2-201ENST00000608615 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
AP000345.2-201ENST00000608615 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.06
AP000345.2-201ENST00000608615 ADRA2BP18089 450 aa21.64■■□□□ 1.05
AP000345.2-201ENST00000608615 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
AP000345.2-201ENST00000608615 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
AP000345.2-201ENST00000608615 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
AP000345.2-201ENST00000608615 NESP48681 1621 aa21.41■■□□□ 1.02
AP000345.2-201ENST00000608615 PPP6R1Q9UPN7 881 aa21.38■■□□□ 1.01
AP000345.2-201ENST00000608615 CUX2O14529 1486 aa21.37■■□□□ 1.01
AP000345.2-201ENST00000608615 WIZO95785 1651 aa21.37■■□□□ 1.01
AP000345.2-201ENST00000608615 LAMC3Q9Y6N6 1575 aa21.32■■□□□ 1
AP000345.2-201ENST00000608615 KCNA4P22459 653 aa21.28■■□□□ 1
AP000345.2-201ENST00000608615 FOXD1Q16676 465 aa21.26■□□□□ 0.99
AP000345.2-201ENST00000608615 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
AP000345.2-201ENST00000608615 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
AP000345.2-201ENST00000608615 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
AP000345.2-201ENST00000608615 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
AP000345.2-201ENST00000608615 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
AP000345.2-201ENST00000608615 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.98
AP000345.2-201ENST00000608615 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
AP000345.2-201ENST00000608615 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
AP000345.2-201ENST00000608615 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
AP000345.2-201ENST00000608615 CEP164Q9UPV0 1460 aa21■□□□□ 0.95
AP000345.2-201ENST00000608615 FANCD2Q9BXW9 1451 aa20.95■□□□□ 0.94
AP000345.2-201ENST00000608615 CFTRP13569 1480 aa20.9■□□□□ 0.94
AP000345.2-201ENST00000608615 WDR62O43379 1518 aa20.89■□□□□ 0.94
AP000345.2-201ENST00000608615 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
AP000345.2-201ENST00000608615 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
AP000345.2-201ENST00000608615 URB2Q14146 1524 aaKnown RBP20.71■□□□□ 0.91
AP000345.2-201ENST00000608615 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
AP000345.2-201ENST00000608615 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
AP000345.2-201ENST00000608615 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
AP000345.2-201ENST00000608615 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
AP000345.2-201ENST00000608615 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
AP000345.2-201ENST00000608615 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
AP000345.2-201ENST00000608615 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
AP000345.2-201ENST00000608615 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
AP000345.2-201ENST00000608615 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
AP000345.2-201ENST00000608615 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
AP000345.2-201ENST00000608615 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
AP000345.2-201ENST00000608615 CSRNP3Q8WYN3 585 aa20.4■□□□□ 0.86
AP000345.2-201ENST00000608615 FBLN2P98095 1184 aa20.34■□□□□ 0.85
AP000345.2-201ENST00000608615 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
AP000345.2-201ENST00000608615 TARBP1Q13395 1621 aaKnown RBP20.31■□□□□ 0.84
AP000345.2-201ENST00000608615 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
AP000345.2-201ENST00000608615 SOGA1O94964 1423 aa20.3■□□□□ 0.84
AP000345.2-201ENST00000608615 PIAS4Q8N2W9 510 aaPredicted RBP20.3■□□□□ 0.84
AP000345.2-201ENST00000608615 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
AP000345.2-201ENST00000608615 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
AP000345.2-201ENST00000608615 CHD1O14646 1710 aa20.26■□□□□ 0.83
AP000345.2-201ENST00000608615 CUX1P39880 1505 aa20.24■□□□□ 0.83
AP000345.2-201ENST00000608615 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
AP000345.2-201ENST00000608615 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
AP000345.2-201ENST00000608615 RIMBP3CA6NJZ7 1639 aa20.18■□□□□ 0.82
AP000345.2-201ENST00000608615 RIMBP3BA6NNM3 1639 aa20.18■□□□□ 0.82
AP000345.2-201ENST00000608615 RIMBP3Q9UFD9 1639 aa20.18■□□□□ 0.82
AP000345.2-201ENST00000608615 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
AP000345.2-201ENST00000608615 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
AP000345.2-201ENST00000608615 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
AP000345.2-201ENST00000608615 ARHGEF11O15085 1522 aa20.11■□□□□ 0.81
AP000345.2-201ENST00000608615 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
AP000345.2-201ENST00000608615 GRIN2BQ13224 1484 aa20.1■□□□□ 0.81
AP000345.2-201ENST00000608615 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
AP000345.2-201ENST00000608615 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
AP000345.2-201ENST00000608615 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
AP000345.2-201ENST00000608615 WRNQ14191 1432 aaPredicted RBP eCLIP20.03■□□□□ 0.8
AP000345.2-201ENST00000608615 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
AP000345.2-201ENST00000608615 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
AP000345.2-201ENST00000608615 SYNJ2O15056 1496 aa20■□□□□ 0.79
AP000345.2-201ENST00000608615 TOP2BQ02880 1626 aa20■□□□□ 0.79
AP000345.2-201ENST00000608615 BIVM-ERCC5R4GMW8 1640 aa20■□□□□ 0.79
AP000345.2-201ENST00000608615 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms