RNA–Protein interactions for RNA: ENST00000608223.6

LINC00854-213, Long intergenic non-protein coding RNA 854, humanhuman

APPRIS ALT2 TSL 5

Gene LINC00854, Length 391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-213ENST00000608223 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
LINC00854-213ENST00000608223 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
LINC00854-213ENST00000608223 ABCC9O60706 1549 aa31.65■■■□□ 2.66
LINC00854-213ENST00000608223 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
LINC00854-213ENST00000608223 NACADO15069 1562 aa29.94■■■□□ 2.38
LINC00854-213ENST00000608223 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
LINC00854-213ENST00000608223 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
LINC00854-213ENST00000608223 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
LINC00854-213ENST00000608223 MYO15BQ96JP2 1530 aa29.52■■■□□ 2.32
LINC00854-213ENST00000608223 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
LINC00854-213ENST00000608223 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
LINC00854-213ENST00000608223 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.28
LINC00854-213ENST00000608223 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.26
LINC00854-213ENST00000608223 SCRIBQ14160 1630 aa28.94■■■□□ 2.22
LINC00854-213ENST00000608223 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
LINC00854-213ENST00000608223 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
LINC00854-213ENST00000608223 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
LINC00854-213ENST00000608223 CECR2Q9BXF3 1484 aa28.47■■■□□ 2.15
LINC00854-213ENST00000608223 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
LINC00854-213ENST00000608223 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
LINC00854-213ENST00000608223 ATAD2BQ9ULI0 1458 aa27.58■■■□□ 2.01
LINC00854-213ENST00000608223 SMARCA2P51531 1590 aa27.51■■□□□ 1.99
LINC00854-213ENST00000608223 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
LINC00854-213ENST00000608223 HMGXB3Q12766 1538 aa27.44■■□□□ 1.98
LINC00854-213ENST00000608223 BAZ1BQ9UIG0 1483 aaKnown RBP27.33■■□□□ 1.97
LINC00854-213ENST00000608223 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
LINC00854-213ENST00000608223 MROH2BQ7Z745 1585 aa27.29■■□□□ 1.96
LINC00854-213ENST00000608223 PEG3Q9GZU2 1588 aa27.29■■□□□ 1.96
LINC00854-213ENST00000608223 NESP48681 1621 aa27.22■■□□□ 1.95
LINC00854-213ENST00000608223 CUX2O14529 1486 aa27.18■■□□□ 1.94
LINC00854-213ENST00000608223 DNAJC5Q9H3Z4 198 aa27.08■■□□□ 1.93
LINC00854-213ENST00000608223 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
LINC00854-213ENST00000608223 WIZO95785 1651 aa27■■□□□ 1.91
LINC00854-213ENST00000608223 KIF21AQ7Z4S6 1674 aa26.9■■□□□ 1.9
LINC00854-213ENST00000608223 THOC2Q8NI27 1593 aaKnown RBP26.9■■□□□ 1.9
LINC00854-213ENST00000608223 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
LINC00854-213ENST00000608223 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
LINC00854-213ENST00000608223 RSF1Q96T23 1441 aaPredicted RBP26.74■■□□□ 1.87
LINC00854-213ENST00000608223 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
LINC00854-213ENST00000608223 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
LINC00854-213ENST00000608223 CEP164Q9UPV0 1460 aa26.54■■□□□ 1.84
LINC00854-213ENST00000608223 WDR62O43379 1518 aa26.54■■□□□ 1.84
LINC00854-213ENST00000608223 CFTRP13569 1480 aa26.52■■□□□ 1.84
LINC00854-213ENST00000608223 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
LINC00854-213ENST00000608223 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
LINC00854-213ENST00000608223 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
LINC00854-213ENST00000608223 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
LINC00854-213ENST00000608223 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
LINC00854-213ENST00000608223 OSCARQ8IYS5 282 aa26■■□□□ 1.75
LINC00854-213ENST00000608223 TRIM41Q8WV44 630 aa26■■□□□ 1.75
LINC00854-213ENST00000608223 IFT140Q96RY7 1462 aa25.99■■□□□ 1.75
LINC00854-213ENST00000608223 ABCC8Q09428 1581 aa25.97■■□□□ 1.75
LINC00854-213ENST00000608223 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
LINC00854-213ENST00000608223 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.74
LINC00854-213ENST00000608223 EIF4G3O43432 1585 aaKnown RBP25.83■■□□□ 1.73
LINC00854-213ENST00000608223 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
LINC00854-213ENST00000608223 POLA1P09884 1462 aaPredicted RBP25.77■■□□□ 1.72
LINC00854-213ENST00000608223 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.71
LINC00854-213ENST00000608223 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
LINC00854-213ENST00000608223 RAD54L2Q9Y4B4 1467 aa25.7■■□□□ 1.7
LINC00854-213ENST00000608223 SOGA1O94964 1423 aa25.67■■□□□ 1.7
LINC00854-213ENST00000608223 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
LINC00854-213ENST00000608223 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
LINC00854-213ENST00000608223 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
LINC00854-213ENST00000608223 CHD1O14646 1710 aa25.66■■□□□ 1.7
LINC00854-213ENST00000608223 FGD5Q6ZNL6 1462 aa25.64■■□□□ 1.69
LINC00854-213ENST00000608223 CUX1P39880 1505 aa25.63■■□□□ 1.69
LINC00854-213ENST00000608223 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
LINC00854-213ENST00000608223 FBLN2P98095 1184 aa25.61■■□□□ 1.69
LINC00854-213ENST00000608223 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
LINC00854-213ENST00000608223 WDR97A6NE52 1622 aa25.5■■□□□ 1.67
LINC00854-213ENST00000608223 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
LINC00854-213ENST00000608223 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
LINC00854-213ENST00000608223 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
LINC00854-213ENST00000608223 CHMP7Q8WUX9 453 aaPredicted RBP25.4■■□□□ 1.66
LINC00854-213ENST00000608223 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
LINC00854-213ENST00000608223 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
LINC00854-213ENST00000608223 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
LINC00854-213ENST00000608223 ABCA10Q8WWZ4 1543 aa25.32■■□□□ 1.64
LINC00854-213ENST00000608223 SYNJ2O15056 1496 aa25.32■■□□□ 1.64
LINC00854-213ENST00000608223 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
LINC00854-213ENST00000608223 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
LINC00854-213ENST00000608223 CLASP1Q7Z460 1538 aa25.31■■□□□ 1.64
LINC00854-213ENST00000608223 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
LINC00854-213ENST00000608223 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
LINC00854-213ENST00000608223 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
LINC00854-213ENST00000608223 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
LINC00854-213ENST00000608223 TRHP20396 242 aaPredicted RBP25.11■■□□□ 1.61
LINC00854-213ENST00000608223 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
LINC00854-213ENST00000608223 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
LINC00854-213ENST00000608223 FHAD1B1AJZ9 1412 aa25.02■■□□□ 1.6
LINC00854-213ENST00000608223 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
LINC00854-213ENST00000608223 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
LINC00854-213ENST00000608223 NUP160Q12769 1436 aa24.98■■□□□ 1.59
LINC00854-213ENST00000608223 ERCC6L2Q5T890 1561 aa24.96■■□□□ 1.59
LINC00854-213ENST00000608223 SHROOM2Q13796 1616 aa24.88■■□□□ 1.57
LINC00854-213ENST00000608223 PRG4Q92954 1404 aaPredicted RBP24.78■■□□□ 1.56
LINC00854-213ENST00000608223 JPH4Q96JJ6 628 aa24.77■■□□□ 1.56
LINC00854-213ENST00000608223 KIF27Q86VH2 1401 aa24.75■■□□□ 1.55
LINC00854-213ENST00000608223 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms