RNA–Protein interactions for RNA: ENST00000607593.1

LINC00551-201, long intergenic non-protein coding RNA 551, humanhuman

TSL 2 BASIC

Gene LINC00551, Length 1,668 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00551-201ENST00000607593 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
LINC00551-201ENST00000607593 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
LINC00551-201ENST00000607593 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
LINC00551-201ENST00000607593 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
LINC00551-201ENST00000607593 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
LINC00551-201ENST00000607593 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
LINC00551-201ENST00000607593 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
LINC00551-201ENST00000607593 NACADO15069 1562 aa20.02■□□□□ 0.8
LINC00551-201ENST00000607593 ABCC9O60706 1549 aa19.83■□□□□ 0.77
LINC00551-201ENST00000607593 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.76
LINC00551-201ENST00000607593 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
LINC00551-201ENST00000607593 RB1CC1Q8TDY2 1594 aa19.75■□□□□ 0.75
LINC00551-201ENST00000607593 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
LINC00551-201ENST00000607593 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
LINC00551-201ENST00000607593 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
LINC00551-201ENST00000607593 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
LINC00551-201ENST00000607593 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
LINC00551-201ENST00000607593 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
LINC00551-201ENST00000607593 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
LINC00551-201ENST00000607593 WIZO95785 1651 aa19.06■□□□□ 0.64
LINC00551-201ENST00000607593 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
LINC00551-201ENST00000607593 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
LINC00551-201ENST00000607593 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
LINC00551-201ENST00000607593 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
LINC00551-201ENST00000607593 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
LINC00551-201ENST00000607593 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
LINC00551-201ENST00000607593 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
LINC00551-201ENST00000607593 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
LINC00551-201ENST00000607593 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
LINC00551-201ENST00000607593 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
LINC00551-201ENST00000607593 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
LINC00551-201ENST00000607593 EEA1Q15075 1411 aa18.43■□□□□ 0.54
LINC00551-201ENST00000607593 ABCC8Q09428 1581 aa18.39■□□□□ 0.54
LINC00551-201ENST00000607593 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
LINC00551-201ENST00000607593 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
LINC00551-201ENST00000607593 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
LINC00551-201ENST00000607593 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
LINC00551-201ENST00000607593 FAM9AQ8IZU1 332 aaPredicted RBP18.23■□□□□ 0.51
LINC00551-201ENST00000607593 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
LINC00551-201ENST00000607593 SYNJ1O43426 1573 aa18.18■□□□□ 0.5
LINC00551-201ENST00000607593 TOP2BQ02880 1626 aa18.17■□□□□ 0.5
LINC00551-201ENST00000607593 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
LINC00551-201ENST00000607593 KIF21BO75037 1637 aa18.14■□□□□ 0.49
LINC00551-201ENST00000607593 PCGF6Q9BYE7 350 aa18.12■□□□□ 0.49
LINC00551-201ENST00000607593 GOLGA3Q08378 1498 aa18.12■□□□□ 0.49
LINC00551-201ENST00000607593 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.49
LINC00551-201ENST00000607593 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.48
LINC00551-201ENST00000607593 SOGA1O94964 1423 aa18.08■□□□□ 0.48
LINC00551-201ENST00000607593 CFTRP13569 1480 aa18.07■□□□□ 0.48
LINC00551-201ENST00000607593 HRCP23327 699 aa18.06■□□□□ 0.48
LINC00551-201ENST00000607593 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
LINC00551-201ENST00000607593 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
LINC00551-201ENST00000607593 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
LINC00551-201ENST00000607593 ERICH3Q5RHP9 1530 aa17.94■□□□□ 0.46
LINC00551-201ENST00000607593 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
LINC00551-201ENST00000607593 CUX1P39880 1505 aa17.91■□□□□ 0.46
LINC00551-201ENST00000607593 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
LINC00551-201ENST00000607593 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
LINC00551-201ENST00000607593 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
LINC00551-201ENST00000607593 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
LINC00551-201ENST00000607593 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
LINC00551-201ENST00000607593 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
LINC00551-201ENST00000607593 PRXQ9BXM0 1461 aa17.77■□□□□ 0.44
LINC00551-201ENST00000607593 CLIP1P30622 1438 aa17.76■□□□□ 0.43
LINC00551-201ENST00000607593 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
LINC00551-201ENST00000607593 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
LINC00551-201ENST00000607593 FANCD2Q9BXW9 1451 aa17.73■□□□□ 0.43
LINC00551-201ENST00000607593 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
LINC00551-201ENST00000607593 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
LINC00551-201ENST00000607593 CUX2O14529 1486 aa17.63■□□□□ 0.41
LINC00551-201ENST00000607593 CUL7Q14999 1698 aa17.6■□□□□ 0.41
LINC00551-201ENST00000607593 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
LINC00551-201ENST00000607593 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.4
LINC00551-201ENST00000607593 APLP2Q06481 763 aa17.58■□□□□ 0.4
LINC00551-201ENST00000607593 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
LINC00551-201ENST00000607593 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
LINC00551-201ENST00000607593 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.39
LINC00551-201ENST00000607593 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
LINC00551-201ENST00000607593 IGF1RP08069 1367 aa17.48■□□□□ 0.39
LINC00551-201ENST00000607593 NESP48681 1621 aa17.48■□□□□ 0.39
LINC00551-201ENST00000607593 CARMIL1Q5VZK9 1371 aa17.47■□□□□ 0.39
LINC00551-201ENST00000607593 CTTNBP2Q8WZ74 1663 aa17.47■□□□□ 0.39
LINC00551-201ENST00000607593 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
LINC00551-201ENST00000607593 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
LINC00551-201ENST00000607593 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
LINC00551-201ENST00000607593 EFCAB5A4FU69 1503 aa17.44■□□□□ 0.38
LINC00551-201ENST00000607593 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
LINC00551-201ENST00000607593 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
LINC00551-201ENST00000607593 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
LINC00551-201ENST00000607593 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
LINC00551-201ENST00000607593 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
LINC00551-201ENST00000607593 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
LINC00551-201ENST00000607593 CFAP43Q8NDM7 1665 aa17.34■□□□□ 0.37
LINC00551-201ENST00000607593 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
LINC00551-201ENST00000607593 PBRM1Q86U86 1689 aa17.31■□□□□ 0.36
LINC00551-201ENST00000607593 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
LINC00551-201ENST00000607593 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
LINC00551-201ENST00000607593 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
LINC00551-201ENST00000607593 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
LINC00551-201ENST00000607593 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms