RNA–Protein interactions for RNA: ENST00000607583.1

CYB561D2-212, Transcript of cytochrome b561 family member D2, humanhuman

TSL 3

Gene CYB561D2, Length 505 nt, Biotype antisense RNA, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D2-212ENST00000607583 NISCHQ9Y2I1 1504 aa56.13■■■■■ 6.58
CYB561D2-212ENST00000607583 CCDC180Q9P1Z9 1646 aa50.13■■■■■ 5.62
CYB561D2-212ENST00000607583 ABCC9O60706 1549 aa49.16■■■■■ 5.46
CYB561D2-212ENST00000607583 RB1CC1Q8TDY2 1594 aa47.25■■■■■ 5.15
CYB561D2-212ENST00000607583 NACADO15069 1562 aa47.12■■■■■ 5.13
CYB561D2-212ENST00000607583 DCAF8L2P0C7V8 631 aa46.91■■■■■ 5.1
CYB561D2-212ENST00000607583 MYO15BQ96JP2 1530 aa46.75■■■■■ 5.07
CYB561D2-212ENST00000607583 ZCCHC6Q5VYS8 1495 aaKnown RBP46.73■■■■■ 5.07
CYB561D2-212ENST00000607583 DCAF1Q9Y4B6 1507 aa46.46■■■■■ 5.03
CYB561D2-212ENST00000607583 UNC13AQ9UPW8 1703 aa46.22■■■■■ 4.99
CYB561D2-212ENST00000607583 PABPN1Q86U42 306 aaKnown RBP eCLIP45.82■■■■■ 4.93
CYB561D2-212ENST00000607583 BICRAQ9NZM4 1560 aa45.79■■■■■ 4.92
CYB561D2-212ENST00000607583 SCRIBQ14160 1630 aa45.67■■■■■ 4.9
CYB561D2-212ENST00000607583 SHROOM4Q9ULL8 1493 aa45.36■■■■■ 4.85
CYB561D2-212ENST00000607583 DNAJC5BQ9UF47 199 aa45.21■■■■■ 4.83
CYB561D2-212ENST00000607583 EIF4G1Q04637 1599 aaKnown RBP44.62■■■■■ 4.73
CYB561D2-212ENST00000607583 CC2D2AQ9P2K1 1620 aa44.5■■■■■ 4.71
CYB561D2-212ENST00000607583 CECR2Q9BXF3 1484 aa44.21■■■■■ 4.67
CYB561D2-212ENST00000607583 SMARCA4P51532 1647 aa43.66■■■■■ 4.58
CYB561D2-212ENST00000607583 BAZ1AQ9NRL2 1556 aaPredicted RBP43.57■■■■■ 4.57
CYB561D2-212ENST00000607583 SMARCA2P51531 1590 aa43.42■■■■■ 4.54
CYB561D2-212ENST00000607583 NCAPD3P42695 1498 aa43.42■■■■■ 4.54
CYB561D2-212ENST00000607583 ATAD2BQ9ULI0 1458 aa43.42■■■■■ 4.54
CYB561D2-212ENST00000607583 HMGXB3Q12766 1538 aa43.27■■■■■ 4.52
CYB561D2-212ENST00000607583 MROH2BQ7Z745 1585 aa43.24■■■■■ 4.51
CYB561D2-212ENST00000607583 PEG3Q9GZU2 1588 aa43.22■■■■■ 4.51
CYB561D2-212ENST00000607583 BAZ1BQ9UIG0 1483 aaKnown RBP43.1■■■■■ 4.49
CYB561D2-212ENST00000607583 WIZO95785 1651 aa42.8■■■■■ 4.44
CYB561D2-212ENST00000607583 RSF1Q96T23 1441 aaPredicted RBP42.63■■■■■ 4.42
CYB561D2-212ENST00000607583 NESP48681 1621 aa42.46■■■■■ 4.39
CYB561D2-212ENST00000607583 ERCC6Q03468 1493 aa42.45■■■■■ 4.39
CYB561D2-212ENST00000607583 LAMC3Q9Y6N6 1575 aa42.39■■■■■ 4.38
CYB561D2-212ENST00000607583 TOP2AP11388 1531 aaKnown RBP42.36■■■■■ 4.37
CYB561D2-212ENST00000607583 CADPSQ9ULU8 1353 aa42.14■■■■■ 4.34
CYB561D2-212ENST00000607583 CUX2O14529 1486 aa42.09■■■■■ 4.33
CYB561D2-212ENST00000607583 PDS5BQ9NTI5 1447 aa42.07■■■■■ 4.33
CYB561D2-212ENST00000607583 KIF21AQ7Z4S6 1674 aa42.05■■■■■ 4.32
CYB561D2-212ENST00000607583 THOC2Q8NI27 1593 aaKnown RBP41.96■■■■■ 4.31
CYB561D2-212ENST00000607583 CFTRP13569 1480 aa41.85■■■■■ 4.29
CYB561D2-212ENST00000607583 CCDC88BA6NC98 1476 aa41.79■■■■■ 4.28
CYB561D2-212ENST00000607583 FANCD2Q9BXW9 1451 aa41.7■■■■■ 4.27
CYB561D2-212ENST00000607583 CEP164Q9UPV0 1460 aa41.7■■■■■ 4.27
CYB561D2-212ENST00000607583 MRC2Q9UBG0 1479 aa41.68■■■■■ 4.26
CYB561D2-212ENST00000607583 PRDM2Q13029 1718 aa41.68■■■■■ 4.26
CYB561D2-212ENST00000607583 WDR62O43379 1518 aa41.57■■■■■ 4.25
CYB561D2-212ENST00000607583 SUPT5HO00267 1087 aaKnown RBP41.33■■■■■ 4.21
CYB561D2-212ENST00000607583 URB2Q14146 1524 aaKnown RBP41.28■■■■■ 4.2
CYB561D2-212ENST00000607583 ABCC8Q09428 1581 aa41■■■■■ 4.15
CYB561D2-212ENST00000607583 TOPBP1Q92547 1522 aa41■■■■■ 4.15
CYB561D2-212ENST00000607583 DNMBPQ6XZF7 1577 aa40.98■■■■■ 4.15
CYB561D2-212ENST00000607583 DNAJC5Q9H3Z4 198 aa40.95■■■■■ 4.15
CYB561D2-212ENST00000607583 IFT140Q96RY7 1462 aa40.82■■■■■ 4.12
CYB561D2-212ENST00000607583 POLA1P09884 1462 aaPredicted RBP40.64■■■■■ 4.1
CYB561D2-212ENST00000607583 ZNF608Q9ULD9 1512 aaPredicted RBP40.62■■■■■ 4.09
CYB561D2-212ENST00000607583 CUX1P39880 1505 aa40.61■■■■■ 4.09
CYB561D2-212ENST00000607583 TARBP1Q13395 1621 aaKnown RBP40.6■■■■■ 4.09
CYB561D2-212ENST00000607583 EIF4G3O43432 1585 aaKnown RBP40.53■■■■■ 4.08
CYB561D2-212ENST00000607583 FGD5Q6ZNL6 1462 aa40.51■■■■■ 4.08
CYB561D2-212ENST00000607583 RAD54L2Q9Y4B4 1467 aa40.43■■■■■ 4.06
CYB561D2-212ENST00000607583 SOGA1O94964 1423 aa40.42■■■■■ 4.06
CYB561D2-212ENST00000607583 AQRO60306 1485 aaKnown RBP eCLIP40.34■■■■■ 4.05
CYB561D2-212ENST00000607583 WDR97A6NE52 1622 aa40.32■■■■■ 4.05
CYB561D2-212ENST00000607583 WRNQ14191 1432 aaPredicted RBP eCLIP40.25■■■■■ 4.03
CYB561D2-212ENST00000607583 BIVM-ERCC5R4GMW8 1640 aa40.24■■■■■ 4.03
CYB561D2-212ENST00000607583 TOP2BQ02880 1626 aa40.23■■■■■ 4.03
CYB561D2-212ENST00000607583 TDRD9Q8NDG6 1382 aaKnown RBP40.22■■■■■ 4.03
CYB561D2-212ENST00000607583 OSCARQ8IYS5 282 aa40.2■■■■■ 4.03
CYB561D2-212ENST00000607583 SYNJ1O43426 1573 aa40.18■■■■■ 4.02
CYB561D2-212ENST00000607583 ABCA10Q8WWZ4 1543 aa40.11■■■■■ 4.01
CYB561D2-212ENST00000607583 CHD1O14646 1710 aa40.09■■■■■ 4.01
CYB561D2-212ENST00000607583 GRIN2BQ13224 1484 aa40.03■■■■■ 4
CYB561D2-212ENST00000607583 PBRM1Q86U86 1689 aa40.02■■■■■ 4
CYB561D2-212ENST00000607583 SNAPC4Q5SXM2 1469 aa40.02■■■■■ 4
CYB561D2-212ENST00000607583 ABCA5Q8WWZ7 1642 aa40.02■■■■■ 4
CYB561D2-212ENST00000607583 GAPVD1Q14C86 1478 aa40■■■■□ 3.99
CYB561D2-212ENST00000607583 MAGI1Q96QZ7 1491 aaPredicted RBP39.98■■■■□ 3.99
CYB561D2-212ENST00000607583 FBLN2P98095 1184 aa39.9■■■■□ 3.98
CYB561D2-212ENST00000607583 SYNJ2O15056 1496 aa39.81■■■■□ 3.96
CYB561D2-212ENST00000607583 CHMP7Q8WUX9 453 aaPredicted RBP39.75■■■■□ 3.95
CYB561D2-212ENST00000607583 RIMBP3CA6NJZ7 1639 aa39.69■■■■□ 3.94
CYB561D2-212ENST00000607583 RIMBP3BA6NNM3 1639 aa39.69■■■■□ 3.94
CYB561D2-212ENST00000607583 RIMBP3Q9UFD9 1639 aa39.69■■■■□ 3.94
CYB561D2-212ENST00000607583 ADAMTS12P58397 1594 aa39.67■■■■□ 3.94
CYB561D2-212ENST00000607583 ERICH3Q5RHP9 1530 aa39.65■■■■□ 3.94
CYB561D2-212ENST00000607583 ARHGEF11O15085 1522 aa39.63■■■■□ 3.93
CYB561D2-212ENST00000607583 CLASP1Q7Z460 1538 aa39.6■■■■□ 3.93
CYB561D2-212ENST00000607583 TRIM41Q8WV44 630 aa39.54■■■■□ 3.92
CYB561D2-212ENST00000607583 GRIN2AQ12879 1464 aa39.53■■■■□ 3.92
CYB561D2-212ENST00000607583 FHAD1B1AJZ9 1412 aa39.52■■■■□ 3.92
CYB561D2-212ENST00000607583 KIF27Q86VH2 1401 aa39.43■■■■□ 3.9
CYB561D2-212ENST00000607583 CEP170Q5SW79 1584 aa39.35■■■■□ 3.89
CYB561D2-212ENST00000607583 NUP160Q12769 1436 aa39.33■■■■□ 3.89
CYB561D2-212ENST00000607583 CUL7Q14999 1698 aa39.29■■■■□ 3.88
CYB561D2-212ENST00000607583 ARAP1Q96P48 1450 aa39.28■■■■□ 3.88
CYB561D2-212ENST00000607583 IGF1RP08069 1367 aa39.22■■■■□ 3.87
CYB561D2-212ENST00000607583 CYB5RLQ6IPT4 315 aa39.18■■■■□ 3.86
CYB561D2-212ENST00000607583 SHROOM2Q13796 1616 aa39.12■■■■□ 3.85
CYB561D2-212ENST00000607583 RUSC2Q8N2Y8 1516 aa39.09■■■■□ 3.85
CYB561D2-212ENST00000607583 CARMIL1Q5VZK9 1371 aa39.01■■■■□ 3.84
CYB561D2-212ENST00000607583 ERCC6L2Q5T890 1561 aa38.99■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms