RNA–Protein interactions for RNA: ENST00000607039.1

CTTNBP2NL-204, Transcript of CTTNBP2 N-terminal like, humanhuman

TSL 1 (best)

Gene CTTNBP2NL, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NL-204ENST00000607039 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
CTTNBP2NL-204ENST00000607039 NISCHQ9Y2I1 1504 aa18.98■□□□□ 0.63
CTTNBP2NL-204ENST00000607039 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
CTTNBP2NL-204ENST00000607039 ABCC9O60706 1549 aa17.17■□□□□ 0.34
CTTNBP2NL-204ENST00000607039 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
CTTNBP2NL-204ENST00000607039 CCDC180Q9P1Z9 1646 aa16.98■□□□□ 0.31
CTTNBP2NL-204ENST00000607039 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
CTTNBP2NL-204ENST00000607039 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
CTTNBP2NL-204ENST00000607039 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
CTTNBP2NL-204ENST00000607039 NACADO15069 1562 aa16.14■□□□□ 0.17
CTTNBP2NL-204ENST00000607039 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
CTTNBP2NL-204ENST00000607039 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.15
CTTNBP2NL-204ENST00000607039 FOXD1Q16676 465 aa15.91■□□□□ 0.14
CTTNBP2NL-204ENST00000607039 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
CTTNBP2NL-204ENST00000607039 BICRAQ9NZM4 1560 aa15.8■□□□□ 0.12
CTTNBP2NL-204ENST00000607039 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
CTTNBP2NL-204ENST00000607039 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
CTTNBP2NL-204ENST00000607039 DCAF1Q9Y4B6 1507 aa15.66■□□□□ 0.1
CTTNBP2NL-204ENST00000607039 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
CTTNBP2NL-204ENST00000607039 SCRIBQ14160 1630 aa15.52■□□□□ 0.07
CTTNBP2NL-204ENST00000607039 CECR2Q9BXF3 1484 aa15.48■□□□□ 0.07
CTTNBP2NL-204ENST00000607039 CC2D2AQ9P2K1 1620 aa15.47■□□□□ 0.07
CTTNBP2NL-204ENST00000607039 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
CTTNBP2NL-204ENST00000607039 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
CTTNBP2NL-204ENST00000607039 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
CTTNBP2NL-204ENST00000607039 MSH5O43196 834 aa14.95□□□□□ -0.02
CTTNBP2NL-204ENST00000607039 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
CTTNBP2NL-204ENST00000607039 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
CTTNBP2NL-204ENST00000607039 PIAS4Q8N2W9 510 aaPredicted RBP14.85□□□□□ -0.03
CTTNBP2NL-204ENST00000607039 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
CTTNBP2NL-204ENST00000607039 CUX2O14529 1486 aa14.82□□□□□ -0.04
CTTNBP2NL-204ENST00000607039 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
CTTNBP2NL-204ENST00000607039 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
CTTNBP2NL-204ENST00000607039 SMARCA4P51532 1647 aa14.79□□□□□ -0.04
CTTNBP2NL-204ENST00000607039 HMGXB3Q12766 1538 aa14.78□□□□□ -0.04
CTTNBP2NL-204ENST00000607039 ADRA2BP18089 450 aa14.76□□□□□ -0.05
CTTNBP2NL-204ENST00000607039 NESP48681 1621 aa14.72□□□□□ -0.05
CTTNBP2NL-204ENST00000607039 BAZ1AQ9NRL2 1556 aaPredicted RBP14.72□□□□□ -0.05
CTTNBP2NL-204ENST00000607039 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
CTTNBP2NL-204ENST00000607039 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
CTTNBP2NL-204ENST00000607039 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
CTTNBP2NL-204ENST00000607039 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
CTTNBP2NL-204ENST00000607039 LAMC3Q9Y6N6 1575 aa14.57□□□□□ -0.08
CTTNBP2NL-204ENST00000607039 THOC2Q8NI27 1593 aaKnown RBP14.55□□□□□ -0.08
CTTNBP2NL-204ENST00000607039 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
CTTNBP2NL-204ENST00000607039 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
CTTNBP2NL-204ENST00000607039 KIF21AQ7Z4S6 1674 aa14.44□□□□□ -0.1
CTTNBP2NL-204ENST00000607039 WIZO95785 1651 aa14.4□□□□□ -0.1
CTTNBP2NL-204ENST00000607039 MRC2Q9UBG0 1479 aa14.4□□□□□ -0.1
CTTNBP2NL-204ENST00000607039 WDR62O43379 1518 aa14.35□□□□□ -0.11
CTTNBP2NL-204ENST00000607039 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
CTTNBP2NL-204ENST00000607039 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
CTTNBP2NL-204ENST00000607039 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
CTTNBP2NL-204ENST00000607039 CFTRP13569 1480 aa14.29□□□□□ -0.12
CTTNBP2NL-204ENST00000607039 TRIM41Q8WV44 630 aa14.27□□□□□ -0.12
CTTNBP2NL-204ENST00000607039 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
CTTNBP2NL-204ENST00000607039 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
CTTNBP2NL-204ENST00000607039 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
CTTNBP2NL-204ENST00000607039 CCDC88BA6NC98 1476 aa14.11□□□□□ -0.15
CTTNBP2NL-204ENST00000607039 IFT140Q96RY7 1462 aa14.05□□□□□ -0.16
CTTNBP2NL-204ENST00000607039 ZNF608Q9ULD9 1512 aaPredicted RBP14.04□□□□□ -0.16
CTTNBP2NL-204ENST00000607039 TOPBP1Q92547 1522 aa14.02□□□□□ -0.17
CTTNBP2NL-204ENST00000607039 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
CTTNBP2NL-204ENST00000607039 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
CTTNBP2NL-204ENST00000607039 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
CTTNBP2NL-204ENST00000607039 RIMBP3CA6NJZ7 1639 aa13.92□□□□□ -0.18
CTTNBP2NL-204ENST00000607039 RIMBP3BA6NNM3 1639 aa13.92□□□□□ -0.18
CTTNBP2NL-204ENST00000607039 RIMBP3Q9UFD9 1639 aa13.92□□□□□ -0.18
CTTNBP2NL-204ENST00000607039 AQRO60306 1485 aaKnown RBP eCLIP13.92□□□□□ -0.18
CTTNBP2NL-204ENST00000607039 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
CTTNBP2NL-204ENST00000607039 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
CTTNBP2NL-204ENST00000607039 KCNA4P22459 653 aa13.89□□□□□ -0.19
CTTNBP2NL-204ENST00000607039 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
CTTNBP2NL-204ENST00000607039 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
CTTNBP2NL-204ENST00000607039 FBLN2P98095 1184 aa13.86□□□□□ -0.19
CTTNBP2NL-204ENST00000607039 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
CTTNBP2NL-204ENST00000607039 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
CTTNBP2NL-204ENST00000607039 SOGA1O94964 1423 aa13.83□□□□□ -0.2
CTTNBP2NL-204ENST00000607039 TDRD9Q8NDG6 1382 aaKnown RBP13.83□□□□□ -0.2
CTTNBP2NL-204ENST00000607039 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
CTTNBP2NL-204ENST00000607039 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.2
CTTNBP2NL-204ENST00000607039 ARAP1Q96P48 1450 aa13.77□□□□□ -0.2
CTTNBP2NL-204ENST00000607039 CHD1O14646 1710 aa13.77□□□□□ -0.21
CTTNBP2NL-204ENST00000607039 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
CTTNBP2NL-204ENST00000607039 CUX1P39880 1505 aa13.75□□□□□ -0.21
CTTNBP2NL-204ENST00000607039 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
CTTNBP2NL-204ENST00000607039 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
CTTNBP2NL-204ENST00000607039 WDR97A6NE52 1622 aa13.71□□□□□ -0.22
CTTNBP2NL-204ENST00000607039 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
CTTNBP2NL-204ENST00000607039 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
CTTNBP2NL-204ENST00000607039 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
CTTNBP2NL-204ENST00000607039 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
CTTNBP2NL-204ENST00000607039 SYNJ1O43426 1573 aa13.65□□□□□ -0.22
CTTNBP2NL-204ENST00000607039 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
CTTNBP2NL-204ENST00000607039 SUPT5HO00267 1087 aaKnown RBP13.63□□□□□ -0.23
CTTNBP2NL-204ENST00000607039 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
CTTNBP2NL-204ENST00000607039 MAPK8IP2Q13387 824 aaPredicted RBP13.57□□□□□ -0.24
CTTNBP2NL-204ENST00000607039 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
CTTNBP2NL-204ENST00000607039 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
CTTNBP2NL-204ENST00000607039 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms