RNA–Protein interactions for RNA: ENST00000606550.1

FAM47E-209, Transcript of family with sequence similarity 47 member E, humanhuman

Gene FAM47E, Length 2,109 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47E-209ENST00000606550 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
FAM47E-209ENST00000606550 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
FAM47E-209ENST00000606550 ABCC9O60706 1549 aa19.58■□□□□ 0.72
FAM47E-209ENST00000606550 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
FAM47E-209ENST00000606550 NACADO15069 1562 aa18.8■□□□□ 0.6
FAM47E-209ENST00000606550 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
FAM47E-209ENST00000606550 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
FAM47E-209ENST00000606550 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
FAM47E-209ENST00000606550 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
FAM47E-209ENST00000606550 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
FAM47E-209ENST00000606550 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
FAM47E-209ENST00000606550 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
FAM47E-209ENST00000606550 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
FAM47E-209ENST00000606550 SHROOM4Q9ULL8 1493 aa18.14■□□□□ 0.49
FAM47E-209ENST00000606550 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
FAM47E-209ENST00000606550 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
FAM47E-209ENST00000606550 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
FAM47E-209ENST00000606550 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
FAM47E-209ENST00000606550 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
FAM47E-209ENST00000606550 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
FAM47E-209ENST00000606550 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
FAM47E-209ENST00000606550 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
FAM47E-209ENST00000606550 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
FAM47E-209ENST00000606550 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
FAM47E-209ENST00000606550 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
FAM47E-209ENST00000606550 MROH2BQ7Z745 1585 aa17.21■□□□□ 0.35
FAM47E-209ENST00000606550 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
FAM47E-209ENST00000606550 WIZO95785 1651 aa17■□□□□ 0.31
FAM47E-209ENST00000606550 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
FAM47E-209ENST00000606550 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
FAM47E-209ENST00000606550 LAMC3Q9Y6N6 1575 aa16.9■□□□□ 0.3
FAM47E-209ENST00000606550 NESP48681 1621 aa16.9■□□□□ 0.3
FAM47E-209ENST00000606550 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
FAM47E-209ENST00000606550 CADPSQ9ULU8 1353 aa16.83■□□□□ 0.28
FAM47E-209ENST00000606550 CUX2O14529 1486 aa16.81■□□□□ 0.28
FAM47E-209ENST00000606550 PDS5BQ9NTI5 1447 aa16.81■□□□□ 0.28
FAM47E-209ENST00000606550 CFTRP13569 1480 aa16.71■□□□□ 0.27
FAM47E-209ENST00000606550 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
FAM47E-209ENST00000606550 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
FAM47E-209ENST00000606550 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
FAM47E-209ENST00000606550 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
FAM47E-209ENST00000606550 CEP164Q9UPV0 1460 aa16.62■□□□□ 0.25
FAM47E-209ENST00000606550 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
FAM47E-209ENST00000606550 WDR62O43379 1518 aa16.57■□□□□ 0.24
FAM47E-209ENST00000606550 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
FAM47E-209ENST00000606550 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
FAM47E-209ENST00000606550 URB2Q14146 1524 aaKnown RBP16.44■□□□□ 0.22
FAM47E-209ENST00000606550 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
FAM47E-209ENST00000606550 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
FAM47E-209ENST00000606550 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
FAM47E-209ENST00000606550 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
FAM47E-209ENST00000606550 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
FAM47E-209ENST00000606550 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
FAM47E-209ENST00000606550 POLA1P09884 1462 aaPredicted RBP16.19■□□□□ 0.18
FAM47E-209ENST00000606550 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
FAM47E-209ENST00000606550 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
FAM47E-209ENST00000606550 CUX1P39880 1505 aa16.16■□□□□ 0.18
FAM47E-209ENST00000606550 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
FAM47E-209ENST00000606550 SOGA1O94964 1423 aa16.13■□□□□ 0.17
FAM47E-209ENST00000606550 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
FAM47E-209ENST00000606550 RAD54L2Q9Y4B4 1467 aa16.09■□□□□ 0.17
FAM47E-209ENST00000606550 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
FAM47E-209ENST00000606550 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
FAM47E-209ENST00000606550 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
FAM47E-209ENST00000606550 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
FAM47E-209ENST00000606550 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
FAM47E-209ENST00000606550 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
FAM47E-209ENST00000606550 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
FAM47E-209ENST00000606550 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
FAM47E-209ENST00000606550 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
FAM47E-209ENST00000606550 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
FAM47E-209ENST00000606550 MAGI1Q96QZ7 1491 aaPredicted RBP15.95■□□□□ 0.14
FAM47E-209ENST00000606550 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
FAM47E-209ENST00000606550 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
FAM47E-209ENST00000606550 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
FAM47E-209ENST00000606550 FBLN2P98095 1184 aa15.9■□□□□ 0.14
FAM47E-209ENST00000606550 CHD1O14646 1710 aa15.9■□□□□ 0.14
FAM47E-209ENST00000606550 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
FAM47E-209ENST00000606550 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
FAM47E-209ENST00000606550 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
FAM47E-209ENST00000606550 MYT1Q01538 1121 aa15.86■□□□□ 0.13
FAM47E-209ENST00000606550 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
FAM47E-209ENST00000606550 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
FAM47E-209ENST00000606550 RIMBP3CA6NJZ7 1639 aa15.78■□□□□ 0.12
FAM47E-209ENST00000606550 RIMBP3BA6NNM3 1639 aa15.78■□□□□ 0.12
FAM47E-209ENST00000606550 RIMBP3Q9UFD9 1639 aa15.78■□□□□ 0.12
FAM47E-209ENST00000606550 PELP1Q8IZL8 1130 aaKnown RBP15.78■□□□□ 0.12
FAM47E-209ENST00000606550 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
FAM47E-209ENST00000606550 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
FAM47E-209ENST00000606550 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
FAM47E-209ENST00000606550 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
FAM47E-209ENST00000606550 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
FAM47E-209ENST00000606550 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
FAM47E-209ENST00000606550 NUP160Q12769 1436 aa15.7■□□□□ 0.1
FAM47E-209ENST00000606550 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
FAM47E-209ENST00000606550 IGF1RP08069 1367 aa15.66■□□□□ 0.1
FAM47E-209ENST00000606550 CEP170Q5SW79 1584 aa15.65■□□□□ 0.1
FAM47E-209ENST00000606550 CYB5RLQ6IPT4 315 aa15.64■□□□□ 0.09
FAM47E-209ENST00000606550 CUL7Q14999 1698 aa15.63■□□□□ 0.09
FAM47E-209ENST00000606550 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms