RNA–Protein interactions for RNA: ENST00000606173.1

AL390728.4-202, humanhuman

TSL 3 BASIC

Gene AL390728.4, Length 430 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-202ENST00000606173 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
AL390728.4-202ENST00000606173 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
AL390728.4-202ENST00000606173 ABCC9O60706 1549 aa25.78■■□□□ 1.72
AL390728.4-202ENST00000606173 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
AL390728.4-202ENST00000606173 NACADO15069 1562 aa24.76■■□□□ 1.55
AL390728.4-202ENST00000606173 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
AL390728.4-202ENST00000606173 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
AL390728.4-202ENST00000606173 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
AL390728.4-202ENST00000606173 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
AL390728.4-202ENST00000606173 UNC13AQ9UPW8 1703 aa24.05■■□□□ 1.44
AL390728.4-202ENST00000606173 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
AL390728.4-202ENST00000606173 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
AL390728.4-202ENST00000606173 BICRAQ9NZM4 1560 aa23.93■■□□□ 1.42
AL390728.4-202ENST00000606173 SCRIBQ14160 1630 aa23.8■■□□□ 1.4
AL390728.4-202ENST00000606173 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
AL390728.4-202ENST00000606173 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
AL390728.4-202ENST00000606173 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.32
AL390728.4-202ENST00000606173 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
AL390728.4-202ENST00000606173 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
AL390728.4-202ENST00000606173 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
AL390728.4-202ENST00000606173 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
AL390728.4-202ENST00000606173 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
AL390728.4-202ENST00000606173 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
AL390728.4-202ENST00000606173 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
AL390728.4-202ENST00000606173 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
AL390728.4-202ENST00000606173 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
AL390728.4-202ENST00000606173 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
AL390728.4-202ENST00000606173 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
AL390728.4-202ENST00000606173 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
AL390728.4-202ENST00000606173 WIZO95785 1651 aa22.24■■□□□ 1.15
AL390728.4-202ENST00000606173 CUX2O14529 1486 aa22.23■■□□□ 1.15
AL390728.4-202ENST00000606173 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
AL390728.4-202ENST00000606173 NESP48681 1621 aa22.18■■□□□ 1.14
AL390728.4-202ENST00000606173 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
AL390728.4-202ENST00000606173 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
AL390728.4-202ENST00000606173 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
AL390728.4-202ENST00000606173 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
AL390728.4-202ENST00000606173 CFTRP13569 1480 aa21.94■■□□□ 1.1
AL390728.4-202ENST00000606173 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
AL390728.4-202ENST00000606173 MRC2Q9UBG0 1479 aa21.89■■□□□ 1.09
AL390728.4-202ENST00000606173 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
AL390728.4-202ENST00000606173 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
AL390728.4-202ENST00000606173 WDR62O43379 1518 aa21.81■■□□□ 1.08
AL390728.4-202ENST00000606173 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
AL390728.4-202ENST00000606173 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
AL390728.4-202ENST00000606173 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
AL390728.4-202ENST00000606173 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
AL390728.4-202ENST00000606173 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
AL390728.4-202ENST00000606173 IFT140Q96RY7 1462 aa21.45■■□□□ 1.03
AL390728.4-202ENST00000606173 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
AL390728.4-202ENST00000606173 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
AL390728.4-202ENST00000606173 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
AL390728.4-202ENST00000606173 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
AL390728.4-202ENST00000606173 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
AL390728.4-202ENST00000606173 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
AL390728.4-202ENST00000606173 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
AL390728.4-202ENST00000606173 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
AL390728.4-202ENST00000606173 SOGA1O94964 1423 aa21.2■□□□□ 0.98
AL390728.4-202ENST00000606173 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
AL390728.4-202ENST00000606173 CUX1P39880 1505 aa21.16■□□□□ 0.98
AL390728.4-202ENST00000606173 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
AL390728.4-202ENST00000606173 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.976e-15■■■■■ 150.9
AL390728.4-202ENST00000606173 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
AL390728.4-202ENST00000606173 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
AL390728.4-202ENST00000606173 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
AL390728.4-202ENST00000606173 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
AL390728.4-202ENST00000606173 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
AL390728.4-202ENST00000606173 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
AL390728.4-202ENST00000606173 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
AL390728.4-202ENST00000606173 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
AL390728.4-202ENST00000606173 FBLN2P98095 1184 aa20.95■□□□□ 0.94
AL390728.4-202ENST00000606173 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
AL390728.4-202ENST00000606173 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
AL390728.4-202ENST00000606173 CHD1O14646 1710 aa20.92■□□□□ 0.94
AL390728.4-202ENST00000606173 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
AL390728.4-202ENST00000606173 SYNJ2O15056 1496 aa20.9■□□□□ 0.94
AL390728.4-202ENST00000606173 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
AL390728.4-202ENST00000606173 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
AL390728.4-202ENST00000606173 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
AL390728.4-202ENST00000606173 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
AL390728.4-202ENST00000606173 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
AL390728.4-202ENST00000606173 RIMBP3CA6NJZ7 1639 aa20.82■□□□□ 0.92
AL390728.4-202ENST00000606173 RIMBP3BA6NNM3 1639 aa20.82■□□□□ 0.92
AL390728.4-202ENST00000606173 RIMBP3Q9UFD9 1639 aa20.82■□□□□ 0.92
AL390728.4-202ENST00000606173 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
AL390728.4-202ENST00000606173 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
AL390728.4-202ENST00000606173 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
AL390728.4-202ENST00000606173 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
AL390728.4-202ENST00000606173 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
AL390728.4-202ENST00000606173 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
AL390728.4-202ENST00000606173 CYB5RLQ6IPT4 315 aa20.64■□□□□ 0.89
AL390728.4-202ENST00000606173 NUP160Q12769 1436 aa20.63■□□□□ 0.89
AL390728.4-202ENST00000606173 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
AL390728.4-202ENST00000606173 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
AL390728.4-202ENST00000606173 CUL7Q14999 1698 aa20.54■□□□□ 0.88
AL390728.4-202ENST00000606173 IGF1RP08069 1367 aa20.5■□□□□ 0.87
AL390728.4-202ENST00000606173 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
AL390728.4-202ENST00000606173 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
AL390728.4-202ENST00000606173 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
AL390728.4-202ENST00000606173 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms