RNA–Protein interactions for RNA: ENST00000605476.5

SRGAP2-214, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-214ENST00000605476 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
SRGAP2-214ENST00000605476 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
SRGAP2-214ENST00000605476 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
SRGAP2-214ENST00000605476 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
SRGAP2-214ENST00000605476 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
SRGAP2-214ENST00000605476 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.59
SRGAP2-214ENST00000605476 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
SRGAP2-214ENST00000605476 ABCC9O60706 1549 aa18.44■□□□□ 0.54
SRGAP2-214ENST00000605476 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
SRGAP2-214ENST00000605476 SCRIBQ14160 1630 aa18.3■□□□□ 0.52
SRGAP2-214ENST00000605476 NACADO15069 1562 aa18.24■□□□□ 0.51
SRGAP2-214ENST00000605476 RB1CC1Q8TDY2 1594 aa18.02■□□□□ 0.48
SRGAP2-214ENST00000605476 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
SRGAP2-214ENST00000605476 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
SRGAP2-214ENST00000605476 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
SRGAP2-214ENST00000605476 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
SRGAP2-214ENST00000605476 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.43
SRGAP2-214ENST00000605476 WIZO95785 1651 aa17.63■□□□□ 0.41
SRGAP2-214ENST00000605476 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
SRGAP2-214ENST00000605476 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
SRGAP2-214ENST00000605476 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
SRGAP2-214ENST00000605476 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
SRGAP2-214ENST00000605476 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
SRGAP2-214ENST00000605476 EIF4G1Q04637 1599 aaKnown RBP17.26■□□□□ 0.35
SRGAP2-214ENST00000605476 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
SRGAP2-214ENST00000605476 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
SRGAP2-214ENST00000605476 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
SRGAP2-214ENST00000605476 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.34
SRGAP2-214ENST00000605476 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
SRGAP2-214ENST00000605476 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
SRGAP2-214ENST00000605476 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
SRGAP2-214ENST00000605476 FAM9AQ8IZU1 332 aaPredicted RBP17.05■□□□□ 0.32
SRGAP2-214ENST00000605476 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
SRGAP2-214ENST00000605476 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
SRGAP2-214ENST00000605476 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
SRGAP2-214ENST00000605476 NCAPD3P42695 1498 aa16.83■□□□□ 0.29
SRGAP2-214ENST00000605476 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
SRGAP2-214ENST00000605476 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
SRGAP2-214ENST00000605476 PCGF6Q9BYE7 350 aa16.77■□□□□ 0.28
SRGAP2-214ENST00000605476 SOGA1O94964 1423 aa16.76■□□□□ 0.27
SRGAP2-214ENST00000605476 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
SRGAP2-214ENST00000605476 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
SRGAP2-214ENST00000605476 EEA1Q15075 1411 aa16.63■□□□□ 0.25
SRGAP2-214ENST00000605476 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
SRGAP2-214ENST00000605476 BIVM-ERCC5R4GMW8 1640 aa16.6■□□□□ 0.25
SRGAP2-214ENST00000605476 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
SRGAP2-214ENST00000605476 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
SRGAP2-214ENST00000605476 CFTRP13569 1480 aa16.59■□□□□ 0.25
SRGAP2-214ENST00000605476 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
SRGAP2-214ENST00000605476 CUX1P39880 1505 aa16.52■□□□□ 0.24
SRGAP2-214ENST00000605476 HRCP23327 699 aa16.51■□□□□ 0.23
SRGAP2-214ENST00000605476 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
SRGAP2-214ENST00000605476 GOLGA3Q08378 1498 aa16.5■□□□□ 0.23
SRGAP2-214ENST00000605476 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
SRGAP2-214ENST00000605476 KIF21BO75037 1637 aa16.5■□□□□ 0.23
SRGAP2-214ENST00000605476 UBTFP17480 764 aaKnown RBP16.46■□□□□ 0.23
SRGAP2-214ENST00000605476 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
SRGAP2-214ENST00000605476 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
SRGAP2-214ENST00000605476 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
SRGAP2-214ENST00000605476 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
SRGAP2-214ENST00000605476 NESP48681 1621 aa16.33■□□□□ 0.2
SRGAP2-214ENST00000605476 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
SRGAP2-214ENST00000605476 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
SRGAP2-214ENST00000605476 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
SRGAP2-214ENST00000605476 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
SRGAP2-214ENST00000605476 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
SRGAP2-214ENST00000605476 CLIP1P30622 1438 aa16.28■□□□□ 0.2
SRGAP2-214ENST00000605476 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
SRGAP2-214ENST00000605476 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
SRGAP2-214ENST00000605476 CUX2O14529 1486 aa16.23■□□□□ 0.19
SRGAP2-214ENST00000605476 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
SRGAP2-214ENST00000605476 RANGAP1P46060 587 aaPredicted RBP16.22■□□□□ 0.19
SRGAP2-214ENST00000605476 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.19
SRGAP2-214ENST00000605476 TOPBP1Q92547 1522 aa16.18■□□□□ 0.18
SRGAP2-214ENST00000605476 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
SRGAP2-214ENST00000605476 IGF1RP08069 1367 aa16.14■□□□□ 0.17
SRGAP2-214ENST00000605476 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
SRGAP2-214ENST00000605476 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
SRGAP2-214ENST00000605476 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
SRGAP2-214ENST00000605476 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
SRGAP2-214ENST00000605476 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
SRGAP2-214ENST00000605476 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
SRGAP2-214ENST00000605476 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
SRGAP2-214ENST00000605476 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
SRGAP2-214ENST00000605476 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
SRGAP2-214ENST00000605476 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
SRGAP2-214ENST00000605476 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
SRGAP2-214ENST00000605476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
SRGAP2-214ENST00000605476 APLP2Q06481 763 aa15.99■□□□□ 0.15
SRGAP2-214ENST00000605476 CUL7Q14999 1698 aa15.98■□□□□ 0.15
SRGAP2-214ENST00000605476 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
SRGAP2-214ENST00000605476 CTTNBP2Q8WZ74 1663 aa15.93■□□□□ 0.14
SRGAP2-214ENST00000605476 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
SRGAP2-214ENST00000605476 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
SRGAP2-214ENST00000605476 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
SRGAP2-214ENST00000605476 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
SRGAP2-214ENST00000605476 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
SRGAP2-214ENST00000605476 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
SRGAP2-214ENST00000605476 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
SRGAP2-214ENST00000605476 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms