RNA–Protein interactions for RNA: ENST00000605426.5

SMAGP-207, Transcript of small cell adhesion glycoprotein, humanhuman

TSL 2

Gene SMAGP, Length 610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-207ENST00000605426 NISCHQ9Y2I1 1504 aa59.1■■■■■ 7.05
SMAGP-207ENST00000605426 ABCC9O60706 1549 aa53.62■■■■■ 6.17
SMAGP-207ENST00000605426 CCDC180Q9P1Z9 1646 aa53.14■■■■■ 6.1
SMAGP-207ENST00000605426 RB1CC1Q8TDY2 1594 aa50.78■■■■■ 5.72
SMAGP-207ENST00000605426 DNAJC5BQ9UF47 199 aa50.76■■■■■ 5.72
SMAGP-207ENST00000605426 NACADO15069 1562 aa50.35■■■■■ 5.65
SMAGP-207ENST00000605426 DCAF8L2P0C7V8 631 aa50.07■■■■■ 5.61
SMAGP-207ENST00000605426 PABPN1Q86U42 306 aaKnown RBP eCLIP49.9■■■■■ 5.58
SMAGP-207ENST00000605426 UNC13AQ9UPW8 1703 aa49.71■■■■■ 5.55
SMAGP-207ENST00000605426 MYO15BQ96JP2 1530 aa49.52■■■■■ 5.52
SMAGP-207ENST00000605426 BICRAQ9NZM4 1560 aa49.42■■■■■ 5.5
SMAGP-207ENST00000605426 ZCCHC6Q5VYS8 1495 aaKnown RBP48.89■■■■■ 5.42
SMAGP-207ENST00000605426 DCAF1Q9Y4B6 1507 aa48.75■■■■■ 5.39
SMAGP-207ENST00000605426 SHROOM4Q9ULL8 1493 aa48.57■■■■■ 5.37
SMAGP-207ENST00000605426 SCRIBQ14160 1630 aa48.46■■■■■ 5.35
SMAGP-207ENST00000605426 CC2D2AQ9P2K1 1620 aa48.4■■■■■ 5.34
SMAGP-207ENST00000605426 CECR2Q9BXF3 1484 aa48.32■■■■■ 5.33
SMAGP-207ENST00000605426 EIF4G1Q04637 1599 aaKnown RBP48.18■■■■■ 5.3
SMAGP-207ENST00000605426 DNAJC5Q9H3Z4 198 aa46.81■■■■■ 5.08
SMAGP-207ENST00000605426 NCAPD3P42695 1498 aa46.53■■■■■ 5.04
SMAGP-207ENST00000605426 ATAD2BQ9ULI0 1458 aa46.35■■■■■ 5.01
SMAGP-207ENST00000605426 CUX2O14529 1486 aa46.31■■■■■ 5
SMAGP-207ENST00000605426 ERCC6Q03468 1493 aa46.25■■■■■ 5
SMAGP-207ENST00000605426 SMARCA4P51532 1647 aa46.17■■■■■ 4.98
SMAGP-207ENST00000605426 SMARCA2P51531 1590 aa46.13■■■■■ 4.98
SMAGP-207ENST00000605426 HMGXB3Q12766 1538 aa46.11■■■■■ 4.97
SMAGP-207ENST00000605426 NESP48681 1621 aa45.98■■■■■ 4.95
SMAGP-207ENST00000605426 BAZ1AQ9NRL2 1556 aaPredicted RBP45.86■■■■■ 4.93
SMAGP-207ENST00000605426 BAZ1BQ9UIG0 1483 aaKnown RBP45.83■■■■■ 4.93
SMAGP-207ENST00000605426 PEG3Q9GZU2 1588 aa45.73■■■■■ 4.91
SMAGP-207ENST00000605426 MROH2BQ7Z745 1585 aa45.58■■■■■ 4.89
SMAGP-207ENST00000605426 THOC2Q8NI27 1593 aaKnown RBP45.54■■■■■ 4.88
SMAGP-207ENST00000605426 LAMC3Q9Y6N6 1575 aa45.5■■■■■ 4.87
SMAGP-207ENST00000605426 KIF21AQ7Z4S6 1674 aa45.32■■■■■ 4.85
SMAGP-207ENST00000605426 PDS5BQ9NTI5 1447 aa45.25■■■■■ 4.83
SMAGP-207ENST00000605426 CADPSQ9ULU8 1353 aa45.09■■■■■ 4.81
SMAGP-207ENST00000605426 WIZO95785 1651 aa44.99■■■■■ 4.79
SMAGP-207ENST00000605426 MRC2Q9UBG0 1479 aa44.91■■■■■ 4.78
SMAGP-207ENST00000605426 WDR62O43379 1518 aa44.81■■■■■ 4.76
SMAGP-207ENST00000605426 CEP164Q9UPV0 1460 aa44.64■■■■■ 4.74
SMAGP-207ENST00000605426 FANCD2Q9BXW9 1451 aa44.59■■■■■ 4.73
SMAGP-207ENST00000605426 TRIM41Q8WV44 630 aa44.58■■■■■ 4.73
SMAGP-207ENST00000605426 CFTRP13569 1480 aa44.51■■■■■ 4.72
SMAGP-207ENST00000605426 RSF1Q96T23 1441 aaPredicted RBP44.48■■■■■ 4.71
SMAGP-207ENST00000605426 TOP2AP11388 1531 aaKnown RBP44.35■■■■■ 4.69
SMAGP-207ENST00000605426 URB2Q14146 1524 aaKnown RBP44.28■■■■■ 4.68
SMAGP-207ENST00000605426 OSCARQ8IYS5 282 aa44.16■■■■■ 4.66
SMAGP-207ENST00000605426 PRDM2Q13029 1718 aa43.96■■■■■ 4.63
SMAGP-207ENST00000605426 CCDC88BA6NC98 1476 aa43.91■■■■■ 4.62
SMAGP-207ENST00000605426 ZNF608Q9ULD9 1512 aaPredicted RBP43.81■■■■■ 4.6
SMAGP-207ENST00000605426 IFT140Q96RY7 1462 aa43.76■■■■■ 4.6
SMAGP-207ENST00000605426 TOPBP1Q92547 1522 aa43.71■■■■■ 4.59
SMAGP-207ENST00000605426 RIMBP3CA6NJZ7 1639 aa43.64■■■■■ 4.58
SMAGP-207ENST00000605426 RIMBP3BA6NNM3 1639 aa43.64■■■■■ 4.58
SMAGP-207ENST00000605426 RIMBP3Q9UFD9 1639 aa43.64■■■■■ 4.58
SMAGP-207ENST00000605426 ABCC8Q09428 1581 aa43.5■■■■■ 4.55
SMAGP-207ENST00000605426 EIF4G3O43432 1585 aaKnown RBP43.49■■■■■ 4.55
SMAGP-207ENST00000605426 DNMBPQ6XZF7 1577 aa43.48■■■■■ 4.55
SMAGP-207ENST00000605426 ARHGEF11O15085 1522 aa43.47■■■■■ 4.55
SMAGP-207ENST00000605426 AQRO60306 1485 aaKnown RBP eCLIP43.36■■■■■ 4.53
SMAGP-207ENST00000605426 TARBP1Q13395 1621 aaKnown RBP43.36■■■■■ 4.53
SMAGP-207ENST00000605426 CHD1O14646 1710 aa43.25■■■■■ 4.51
SMAGP-207ENST00000605426 POLA1P09884 1462 aaPredicted RBP43.24■■■■■ 4.51
SMAGP-207ENST00000605426 CYB5RLQ6IPT4 315 aa43.2■■■■■ 4.51
SMAGP-207ENST00000605426 FBLN2P98095 1184 aa43.12■■■■■ 4.49
SMAGP-207ENST00000605426 RAD54L2Q9Y4B4 1467 aa43.12■■■■■ 4.49
SMAGP-207ENST00000605426 TDRD9Q8NDG6 1382 aaKnown RBP43.03■■■■■ 4.48
SMAGP-207ENST00000605426 ARAP1Q96P48 1450 aa43.03■■■■■ 4.48
SMAGP-207ENST00000605426 SOGA1O94964 1423 aa43.03■■■■■ 4.48
SMAGP-207ENST00000605426 FGD5Q6ZNL6 1462 aa42.9■■■■■ 4.46
SMAGP-207ENST00000605426 SNAPC4Q5SXM2 1469 aa42.86■■■■■ 4.45
SMAGP-207ENST00000605426 CUX1P39880 1505 aa42.83■■■■■ 4.45
SMAGP-207ENST00000605426 TRHP20396 242 aaPredicted RBP42.8■■■■■ 4.44
SMAGP-207ENST00000605426 WDR97A6NE52 1622 aa42.79■■■■■ 4.44
SMAGP-207ENST00000605426 CLASP1Q7Z460 1538 aa42.76■■■■■ 4.44
SMAGP-207ENST00000605426 CHMP7Q8WUX9 453 aaPredicted RBP42.72■■■■■ 4.43
SMAGP-207ENST00000605426 MAGI1Q96QZ7 1491 aaPredicted RBP42.7■■■■■ 4.43
SMAGP-207ENST00000605426 GRIN2BQ13224 1484 aa42.68■■■■■ 4.42
SMAGP-207ENST00000605426 SYNJ1O43426 1573 aa42.63■■■■■ 4.41
SMAGP-207ENST00000605426 SYNJ2O15056 1496 aa42.58■■■■■ 4.41
SMAGP-207ENST00000605426 GAPVD1Q14C86 1478 aa42.49■■■■■ 4.39
SMAGP-207ENST00000605426 PBRM1Q86U86 1689 aa42.47■■■■■ 4.39
SMAGP-207ENST00000605426 ABCA10Q8WWZ4 1543 aa42.38■■■■■ 4.37
SMAGP-207ENST00000605426 ABCA5Q8WWZ7 1642 aa42.36■■■■■ 4.37
SMAGP-207ENST00000605426 SUPT5HO00267 1087 aaKnown RBP42.22■■■■■ 4.35
SMAGP-207ENST00000605426 GRIN2AQ12879 1464 aa42.14■■■■■ 4.34
SMAGP-207ENST00000605426 WRNQ14191 1432 aaPredicted RBP eCLIP42.12■■■■■ 4.33
SMAGP-207ENST00000605426 ERCC6L2Q5T890 1561 aa42.12■■■■■ 4.33
SMAGP-207ENST00000605426 ADAMTS12P58397 1594 aa42.05■■■■■ 4.32
SMAGP-207ENST00000605426 CEP170Q5SW79 1584 aa42.03■■■■■ 4.32
SMAGP-207ENST00000605426 NUP160Q12769 1436 aa42.03■■■■■ 4.32
SMAGP-207ENST00000605426 TOP2BQ02880 1626 aa41.99■■■■■ 4.31
SMAGP-207ENST00000605426 BIVM-ERCC5R4GMW8 1640 aa41.99■■■■■ 4.31
SMAGP-207ENST00000605426 FHAD1B1AJZ9 1412 aa41.92■■■■■ 4.3
SMAGP-207ENST00000605426 SHROOM2Q13796 1616 aa41.87■■■■■ 4.29
SMAGP-207ENST00000605426 ERICH3Q5RHP9 1530 aa41.82■■■■■ 4.29
SMAGP-207ENST00000605426 AEBP2Q6ZN18 517 aaPredicted RBP41.8■■■■■ 4.28
SMAGP-207ENST00000605426 PRG4Q92954 1404 aaPredicted RBP41.66■■■■■ 4.26
SMAGP-207ENST00000605426 JPH4Q96JJ6 628 aa41.61■■■■■ 4.25
SMAGP-207ENST00000605426 KIF13AQ9H1H9 1805 aa41.54■■■■■ 4.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms