RNA–Protein interactions for RNA: ENST00000605395.1

HOPX-215, Transcript of HOP homeobox, humanhuman

TSL 4

Gene HOPX, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOPX-215ENST00000605395 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
HOPX-215ENST00000605395 ABCC9O60706 1549 aa17.46■□□□□ 0.39
HOPX-215ENST00000605395 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
HOPX-215ENST00000605395 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
HOPX-215ENST00000605395 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
HOPX-215ENST00000605395 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
HOPX-215ENST00000605395 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
HOPX-215ENST00000605395 NACADO15069 1562 aa15.87■□□□□ 0.13
HOPX-215ENST00000605395 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
HOPX-215ENST00000605395 BICRAQ9NZM4 1560 aa15.8■□□□□ 0.12
HOPX-215ENST00000605395 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
HOPX-215ENST00000605395 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
HOPX-215ENST00000605395 CC2D2AQ9P2K1 1620 aa15.69■□□□□ 0.1
HOPX-215ENST00000605395 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
HOPX-215ENST00000605395 SHROOM4Q9ULL8 1493 aa15.39■□□□□ 0.05
HOPX-215ENST00000605395 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
HOPX-215ENST00000605395 CUX2O14529 1486 aa15.28■□□□□ 0.04
HOPX-215ENST00000605395 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
HOPX-215ENST00000605395 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
HOPX-215ENST00000605395 ERCC6Q03468 1493 aa15.08■□□□□ 0.01
HOPX-215ENST00000605395 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
HOPX-215ENST00000605395 ZCCHC6Q5VYS8 1495 aaKnown RBP14.88□□□□□ -0.03
HOPX-215ENST00000605395 NESP48681 1621 aa14.79□□□□□ -0.04
HOPX-215ENST00000605395 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
HOPX-215ENST00000605395 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
HOPX-215ENST00000605395 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
HOPX-215ENST00000605395 ATAD2BQ9ULI0 1458 aa14.56□□□□□ -0.08
HOPX-215ENST00000605395 KIF21AQ7Z4S6 1674 aa14.51□□□□□ -0.09
HOPX-215ENST00000605395 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
HOPX-215ENST00000605395 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
HOPX-215ENST00000605395 HMGXB3Q12766 1538 aa14.48□□□□□ -0.09
HOPX-215ENST00000605395 AEBP2Q6ZN18 517 aaPredicted RBP14.48□□□□□ -0.09
HOPX-215ENST00000605395 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
HOPX-215ENST00000605395 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
HOPX-215ENST00000605395 RIMBP3CA6NJZ7 1639 aa14.4□□□□□ -0.1
HOPX-215ENST00000605395 RIMBP3BA6NNM3 1639 aa14.4□□□□□ -0.1
HOPX-215ENST00000605395 RIMBP3Q9UFD9 1639 aa14.4□□□□□ -0.1
HOPX-215ENST00000605395 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
HOPX-215ENST00000605395 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
HOPX-215ENST00000605395 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
HOPX-215ENST00000605395 WDR62O43379 1518 aa14.34□□□□□ -0.11
HOPX-215ENST00000605395 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
HOPX-215ENST00000605395 ARHGEF11O15085 1522 aa14.28□□□□□ -0.12
HOPX-215ENST00000605395 CYB5RLQ6IPT4 315 aa14.27□□□□□ -0.13
HOPX-215ENST00000605395 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
HOPX-215ENST00000605395 PEG3Q9GZU2 1588 aa14.16□□□□□ -0.14
HOPX-215ENST00000605395 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
HOPX-215ENST00000605395 ARAP1Q96P48 1450 aa14.1□□□□□ -0.15
HOPX-215ENST00000605395 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
HOPX-215ENST00000605395 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
HOPX-215ENST00000605395 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
HOPX-215ENST00000605395 MROH2BQ7Z745 1585 aa14.02□□□□□ -0.16
HOPX-215ENST00000605395 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
HOPX-215ENST00000605395 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.19
HOPX-215ENST00000605395 CFTRP13569 1480 aa13.89□□□□□ -0.19
HOPX-215ENST00000605395 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
HOPX-215ENST00000605395 CHD1O14646 1710 aa13.87□□□□□ -0.19
HOPX-215ENST00000605395 FBLN2P98095 1184 aa13.85□□□□□ -0.19
HOPX-215ENST00000605395 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
HOPX-215ENST00000605395 WIZO95785 1651 aa13.8□□□□□ -0.2
HOPX-215ENST00000605395 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.2
HOPX-215ENST00000605395 TOPBP1Q92547 1522 aa13.71□□□□□ -0.21
HOPX-215ENST00000605395 CLASP1Q7Z460 1538 aa13.7□□□□□ -0.22
HOPX-215ENST00000605395 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
HOPX-215ENST00000605395 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
HOPX-215ENST00000605395 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
HOPX-215ENST00000605395 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
HOPX-215ENST00000605395 SYNJ1O43426 1573 aa13.58□□□□□ -0.23
HOPX-215ENST00000605395 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.24
HOPX-215ENST00000605395 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
HOPX-215ENST00000605395 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
HOPX-215ENST00000605395 DNMBPQ6XZF7 1577 aa13.56□□□□□ -0.24
HOPX-215ENST00000605395 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
HOPX-215ENST00000605395 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
HOPX-215ENST00000605395 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
HOPX-215ENST00000605395 TOP2AP11388 1531 aaKnown RBP13.53□□□□□ -0.24
HOPX-215ENST00000605395 KIF13AQ9H1H9 1805 aa13.51□□□□□ -0.25
HOPX-215ENST00000605395 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
HOPX-215ENST00000605395 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
HOPX-215ENST00000605395 SOGA1O94964 1423 aa13.46□□□□□ -0.26
HOPX-215ENST00000605395 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
HOPX-215ENST00000605395 CCDC88BA6NC98 1476 aa13.43□□□□□ -0.26
HOPX-215ENST00000605395 CHIC1Q5VXU3 224 aa13.41□□□□□ -0.26
HOPX-215ENST00000605395 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
HOPX-215ENST00000605395 FAM69CQ0P6D2 419 aa13.4□□□□□ -0.26
HOPX-215ENST00000605395 HECW2Q9P2P5 1572 aa13.39□□□□□ -0.27
HOPX-215ENST00000605395 FBXO41Q8TF61 875 aa13.38□□□□□ -0.27
HOPX-215ENST00000605395 KDM6BO15054 1643 aa13.37□□□□□ -0.27
HOPX-215ENST00000605395 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
HOPX-215ENST00000605395 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
HOPX-215ENST00000605395 CEP170Q5SW79 1584 aa13.34□□□□□ -0.27
HOPX-215ENST00000605395 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.28
HOPX-215ENST00000605395 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
HOPX-215ENST00000605395 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
HOPX-215ENST00000605395 DIP2BQ9P265 1576 aa13.28□□□□□ -0.28
HOPX-215ENST00000605395 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
HOPX-215ENST00000605395 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
HOPX-215ENST00000605395 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
HOPX-215ENST00000605395 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
HOPX-215ENST00000605395 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms