RNA–Protein interactions for RNA: ENST00000605125.5

MRPL35-204, Transcript of mitochondrial ribosomal protein L35, humanhuman

TSL 2 BASIC

Gene MRPL35, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-204ENST00000605125 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
MRPL35-204ENST00000605125 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
MRPL35-204ENST00000605125 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
MRPL35-204ENST00000605125 ABCC9O60706 1549 aa24.61■■□□□ 1.53
MRPL35-204ENST00000605125 CCDC180Q9P1Z9 1646 aa24.22■■□□□ 1.47
MRPL35-204ENST00000605125 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
MRPL35-204ENST00000605125 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
MRPL35-204ENST00000605125 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
MRPL35-204ENST00000605125 NACADO15069 1562 aa23.04■■□□□ 1.28
MRPL35-204ENST00000605125 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
MRPL35-204ENST00000605125 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
MRPL35-204ENST00000605125 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.22
MRPL35-204ENST00000605125 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
MRPL35-204ENST00000605125 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
MRPL35-204ENST00000605125 UNC13AQ9UPW8 1703 aa22.63■■□□□ 1.21
MRPL35-204ENST00000605125 ZCCHC6Q5VYS8 1495 aaKnown RBP22.38■■□□□ 1.17
MRPL35-204ENST00000605125 DCAF1Q9Y4B6 1507 aa22.32■■□□□ 1.16
MRPL35-204ENST00000605125 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
MRPL35-204ENST00000605125 CECR2Q9BXF3 1484 aa22.18■■□□□ 1.14
MRPL35-204ENST00000605125 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
MRPL35-204ENST00000605125 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
MRPL35-204ENST00000605125 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.12
MRPL35-204ENST00000605125 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
MRPL35-204ENST00000605125 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
MRPL35-204ENST00000605125 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
MRPL35-204ENST00000605125 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
MRPL35-204ENST00000605125 CUX2O14529 1486 aa21.25■□□□□ 0.99
MRPL35-204ENST00000605125 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
MRPL35-204ENST00000605125 NESP48681 1621 aa21.11■□□□□ 0.97
MRPL35-204ENST00000605125 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
MRPL35-204ENST00000605125 SMARCA2P51531 1590 aa21.09■□□□□ 0.97
MRPL35-204ENST00000605125 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
MRPL35-204ENST00000605125 FOXD1Q16676 465 aa21■□□□□ 0.95
MRPL35-204ENST00000605125 BAZ1BQ9UIG0 1483 aaKnown RBP20.97■□□□□ 0.95
MRPL35-204ENST00000605125 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
MRPL35-204ENST00000605125 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
MRPL35-204ENST00000605125 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
MRPL35-204ENST00000605125 THOC2Q8NI27 1593 aaKnown RBP20.84■□□□□ 0.93
MRPL35-204ENST00000605125 LAMC3Q9Y6N6 1575 aa20.8■□□□□ 0.92
MRPL35-204ENST00000605125 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
MRPL35-204ENST00000605125 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
MRPL35-204ENST00000605125 ADRA2BP18089 450 aa20.69■□□□□ 0.9
MRPL35-204ENST00000605125 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
MRPL35-204ENST00000605125 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
MRPL35-204ENST00000605125 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.89
MRPL35-204ENST00000605125 WIZO95785 1651 aa20.55■□□□□ 0.88
MRPL35-204ENST00000605125 WDR62O43379 1518 aa20.53■□□□□ 0.88
MRPL35-204ENST00000605125 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
MRPL35-204ENST00000605125 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
MRPL35-204ENST00000605125 CFTRP13569 1480 aa20.43■□□□□ 0.86
MRPL35-204ENST00000605125 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
MRPL35-204ENST00000605125 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
MRPL35-204ENST00000605125 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
MRPL35-204ENST00000605125 URB2Q14146 1524 aaKnown RBP20.32■□□□□ 0.84
MRPL35-204ENST00000605125 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
MRPL35-204ENST00000605125 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
MRPL35-204ENST00000605125 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
MRPL35-204ENST00000605125 IFT140Q96RY7 1462 aa20.06■□□□□ 0.8
MRPL35-204ENST00000605125 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
MRPL35-204ENST00000605125 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
MRPL35-204ENST00000605125 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
MRPL35-204ENST00000605125 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
MRPL35-204ENST00000605125 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
MRPL35-204ENST00000605125 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.78
MRPL35-204ENST00000605125 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
MRPL35-204ENST00000605125 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
MRPL35-204ENST00000605125 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
MRPL35-204ENST00000605125 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
MRPL35-204ENST00000605125 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
MRPL35-204ENST00000605125 EIF4G3O43432 1585 aaKnown RBP19.86■□□□□ 0.77
MRPL35-204ENST00000605125 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
MRPL35-204ENST00000605125 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
MRPL35-204ENST00000605125 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
MRPL35-204ENST00000605125 FBLN2P98095 1184 aa19.79■□□□□ 0.76
MRPL35-204ENST00000605125 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
MRPL35-204ENST00000605125 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
MRPL35-204ENST00000605125 SOGA1O94964 1423 aa19.76■□□□□ 0.75
MRPL35-204ENST00000605125 CHD1O14646 1710 aa19.7■□□□□ 0.74
MRPL35-204ENST00000605125 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
MRPL35-204ENST00000605125 KCNA4P22459 653 aa19.67■□□□□ 0.74
MRPL35-204ENST00000605125 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
MRPL35-204ENST00000605125 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
MRPL35-204ENST00000605125 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
MRPL35-204ENST00000605125 CUX1P39880 1505 aa19.61■□□□□ 0.73
MRPL35-204ENST00000605125 CLASP1Q7Z460 1538 aa19.59■□□□□ 0.73
MRPL35-204ENST00000605125 GRIN2BQ13224 1484 aa19.55■□□□□ 0.72
MRPL35-204ENST00000605125 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
MRPL35-204ENST00000605125 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
MRPL35-204ENST00000605125 WDR97A6NE52 1622 aa19.52■□□□□ 0.72
MRPL35-204ENST00000605125 SYNJ2O15056 1496 aa19.51■□□□□ 0.71
MRPL35-204ENST00000605125 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
MRPL35-204ENST00000605125 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
MRPL35-204ENST00000605125 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
MRPL35-204ENST00000605125 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
MRPL35-204ENST00000605125 MSH5O43196 834 aa19.4■□□□□ 0.7
MRPL35-204ENST00000605125 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
MRPL35-204ENST00000605125 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
MRPL35-204ENST00000605125 ERCC6L2Q5T890 1561 aa19.33■□□□□ 0.69
MRPL35-204ENST00000605125 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
MRPL35-204ENST00000605125 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms