RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 NISCHQ9Y2I1 1504 aa26.53■■□□□ 1.84
TUBE1-210ENST00000604967 CCDC180Q9P1Z9 1646 aa23.58■■□□□ 1.36
TUBE1-210ENST00000604967 ABCC9O60706 1549 aa23.36■■□□□ 1.33
TUBE1-210ENST00000604967 RB1CC1Q8TDY2 1594 aa22.27■■□□□ 1.16
TUBE1-210ENST00000604967 NACADO15069 1562 aa22.21■■□□□ 1.15
TUBE1-210ENST00000604967 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
TUBE1-210ENST00000604967 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
TUBE1-210ENST00000604967 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
TUBE1-210ENST00000604967 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.09
TUBE1-210ENST00000604967 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
TUBE1-210ENST00000604967 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.09
TUBE1-210ENST00000604967 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
TUBE1-210ENST00000604967 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
TUBE1-210ENST00000604967 SCRIBQ14160 1630 aa21.59■■□□□ 1.05
TUBE1-210ENST00000604967 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
TUBE1-210ENST00000604967 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
TUBE1-210ENST00000604967 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
TUBE1-210ENST00000604967 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
TUBE1-210ENST00000604967 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
TUBE1-210ENST00000604967 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
TUBE1-210ENST00000604967 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
TUBE1-210ENST00000604967 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
TUBE1-210ENST00000604967 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
TUBE1-210ENST00000604967 SMARCA2P51531 1590 aa20.43■□□□□ 0.86
TUBE1-210ENST00000604967 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
TUBE1-210ENST00000604967 HMGXB3Q12766 1538 aa20.41■□□□□ 0.86
TUBE1-210ENST00000604967 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
TUBE1-210ENST00000604967 WIZO95785 1651 aa20.25■□□□□ 0.83
TUBE1-210ENST00000604967 NESP48681 1621 aa20.22■□□□□ 0.83
TUBE1-210ENST00000604967 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
TUBE1-210ENST00000604967 ERCC6Q03468 1493 aa20.03■□□□□ 0.8
TUBE1-210ENST00000604967 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
TUBE1-210ENST00000604967 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
TUBE1-210ENST00000604967 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
TUBE1-210ENST00000604967 CUX2O14529 1486 aa19.9■□□□□ 0.78
TUBE1-210ENST00000604967 THOC2Q8NI27 1593 aaKnown RBP19.9■□□□□ 0.78
TUBE1-210ENST00000604967 KIF21AQ7Z4S6 1674 aa19.9■□□□□ 0.78
TUBE1-210ENST00000604967 PDS5BQ9NTI5 1447 aa19.83■□□□□ 0.76
TUBE1-210ENST00000604967 CFTRP13569 1480 aa19.8■□□□□ 0.76
TUBE1-210ENST00000604967 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
TUBE1-210ENST00000604967 FANCD2Q9BXW9 1451 aa19.72■□□□□ 0.75
TUBE1-210ENST00000604967 MRC2Q9UBG0 1479 aa19.7■□□□□ 0.74
TUBE1-210ENST00000604967 WDR62O43379 1518 aa19.67■□□□□ 0.74
TUBE1-210ENST00000604967 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
TUBE1-210ENST00000604967 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
TUBE1-210ENST00000604967 DNAJC5Q9H3Z4 198 aa19.59■□□□□ 0.73
TUBE1-210ENST00000604967 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
TUBE1-210ENST00000604967 SUPT5HO00267 1087 aaKnown RBP19.47■□□□□ 0.71
TUBE1-210ENST00000604967 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
TUBE1-210ENST00000604967 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
TUBE1-210ENST00000604967 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
TUBE1-210ENST00000604967 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
TUBE1-210ENST00000604967 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
TUBE1-210ENST00000604967 CUX1P39880 1505 aa19.24■□□□□ 0.67
TUBE1-210ENST00000604967 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
TUBE1-210ENST00000604967 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
TUBE1-210ENST00000604967 RAD54L2Q9Y4B4 1467 aa19.2■□□□□ 0.66
TUBE1-210ENST00000604967 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
TUBE1-210ENST00000604967 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.66
TUBE1-210ENST00000604967 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
TUBE1-210ENST00000604967 SOGA1O94964 1423 aa19.11■□□□□ 0.65
TUBE1-210ENST00000604967 TDRD9Q8NDG6 1382 aaKnown RBP19.08■□□□□ 0.65
TUBE1-210ENST00000604967 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
TUBE1-210ENST00000604967 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
TUBE1-210ENST00000604967 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
TUBE1-210ENST00000604967 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
TUBE1-210ENST00000604967 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
TUBE1-210ENST00000604967 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
TUBE1-210ENST00000604967 CHD1O14646 1710 aa18.94■□□□□ 0.62
TUBE1-210ENST00000604967 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
TUBE1-210ENST00000604967 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
TUBE1-210ENST00000604967 ABCA5Q8WWZ7 1642 aa18.9■□□□□ 0.62
TUBE1-210ENST00000604967 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
TUBE1-210ENST00000604967 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
TUBE1-210ENST00000604967 FBLN2P98095 1184 aa18.85■□□□□ 0.61
TUBE1-210ENST00000604967 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
TUBE1-210ENST00000604967 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
TUBE1-210ENST00000604967 RIMBP3CA6NJZ7 1639 aa18.83■□□□□ 0.61
TUBE1-210ENST00000604967 RIMBP3BA6NNM3 1639 aa18.83■□□□□ 0.61
TUBE1-210ENST00000604967 RIMBP3Q9UFD9 1639 aa18.83■□□□□ 0.61
TUBE1-210ENST00000604967 TRIM41Q8WV44 630 aa18.83■□□□□ 0.6
TUBE1-210ENST00000604967 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
TUBE1-210ENST00000604967 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
TUBE1-210ENST00000604967 CLASP1Q7Z460 1538 aa18.78■□□□□ 0.6
TUBE1-210ENST00000604967 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
TUBE1-210ENST00000604967 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
TUBE1-210ENST00000604967 ARAP1Q96P48 1450 aa18.69■□□□□ 0.58
TUBE1-210ENST00000604967 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
TUBE1-210ENST00000604967 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
TUBE1-210ENST00000604967 CEP170Q5SW79 1584 aa18.64■□□□□ 0.58
TUBE1-210ENST00000604967 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
TUBE1-210ENST00000604967 NUP160Q12769 1436 aa18.63■□□□□ 0.57
TUBE1-210ENST00000604967 CYB5RLQ6IPT4 315 aa18.62■□□□□ 0.57
TUBE1-210ENST00000604967 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
TUBE1-210ENST00000604967 IGF1RP08069 1367 aa18.59■□□□□ 0.57
TUBE1-210ENST00000604967 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
TUBE1-210ENST00000604967 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
TUBE1-210ENST00000604967 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
TUBE1-210ENST00000604967 CUL7Q14999 1698 aa18.42■□□□□ 0.54
TUBE1-210ENST00000604967 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms