RNA–Protein interactions for RNA: ENST00000604925.5

SRGAP2-212, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 5

Gene SRGAP2, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-212ENST00000604925 NISCHQ9Y2I1 1504 aa21.07■□□□□ 0.96
SRGAP2-212ENST00000604925 ABCC9O60706 1549 aa20.58■□□□□ 0.88
SRGAP2-212ENST00000604925 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
SRGAP2-212ENST00000604925 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
SRGAP2-212ENST00000604925 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.69
SRGAP2-212ENST00000604925 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
SRGAP2-212ENST00000604925 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
SRGAP2-212ENST00000604925 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
SRGAP2-212ENST00000604925 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
SRGAP2-212ENST00000604925 NACADO15069 1562 aa18.66■□□□□ 0.58
SRGAP2-212ENST00000604925 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
SRGAP2-212ENST00000604925 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
SRGAP2-212ENST00000604925 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.56
SRGAP2-212ENST00000604925 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
SRGAP2-212ENST00000604925 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
SRGAP2-212ENST00000604925 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
SRGAP2-212ENST00000604925 CUX2O14529 1486 aa18.25■□□□□ 0.51
SRGAP2-212ENST00000604925 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
SRGAP2-212ENST00000604925 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
SRGAP2-212ENST00000604925 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
SRGAP2-212ENST00000604925 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
SRGAP2-212ENST00000604925 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
SRGAP2-212ENST00000604925 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
SRGAP2-212ENST00000604925 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
SRGAP2-212ENST00000604925 NESP48681 1621 aa17.33■□□□□ 0.37
SRGAP2-212ENST00000604925 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
SRGAP2-212ENST00000604925 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
SRGAP2-212ENST00000604925 ZCCHC6Q5VYS8 1495 aaKnown RBP17.17■□□□□ 0.34
SRGAP2-212ENST00000604925 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
SRGAP2-212ENST00000604925 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
SRGAP2-212ENST00000604925 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
SRGAP2-212ENST00000604925 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
SRGAP2-212ENST00000604925 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
SRGAP2-212ENST00000604925 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
SRGAP2-212ENST00000604925 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
SRGAP2-212ENST00000604925 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
SRGAP2-212ENST00000604925 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
SRGAP2-212ENST00000604925 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
SRGAP2-212ENST00000604925 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
SRGAP2-212ENST00000604925 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
SRGAP2-212ENST00000604925 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.31
SRGAP2-212ENST00000604925 ARHGEF11O15085 1522 aa16.92■□□□□ 0.3
SRGAP2-212ENST00000604925 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
SRGAP2-212ENST00000604925 WDR62O43379 1518 aa16.88■□□□□ 0.29
SRGAP2-212ENST00000604925 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.28
SRGAP2-212ENST00000604925 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
SRGAP2-212ENST00000604925 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
SRGAP2-212ENST00000604925 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
SRGAP2-212ENST00000604925 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
SRGAP2-212ENST00000604925 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
SRGAP2-212ENST00000604925 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
SRGAP2-212ENST00000604925 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
SRGAP2-212ENST00000604925 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
SRGAP2-212ENST00000604925 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
SRGAP2-212ENST00000604925 CHD1O14646 1710 aa16.31■□□□□ 0.2
SRGAP2-212ENST00000604925 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
SRGAP2-212ENST00000604925 KDM4FA0A1W2PPD8 638 aa16.3■□□□□ 0.2
SRGAP2-212ENST00000604925 FBLN2P98095 1184 aa16.29■□□□□ 0.2
SRGAP2-212ENST00000604925 CFTRP13569 1480 aa16.22■□□□□ 0.19
SRGAP2-212ENST00000604925 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
SRGAP2-212ENST00000604925 EIF4G3O43432 1585 aaKnown RBP16.19■□□□□ 0.18
SRGAP2-212ENST00000604925 FBXO41Q8TF61 875 aa16.18■□□□□ 0.18
SRGAP2-212ENST00000604925 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
SRGAP2-212ENST00000604925 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
SRGAP2-212ENST00000604925 AQRO60306 1485 aaKnown RBP eCLIP16.12■□□□□ 0.171e-6■■■■■ 33.8
SRGAP2-212ENST00000604925 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
SRGAP2-212ENST00000604925 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
SRGAP2-212ENST00000604925 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.16
SRGAP2-212ENST00000604925 LMTK3Q96Q04 1460 aa16.07■□□□□ 0.16
SRGAP2-212ENST00000604925 SOCS7O14512 581 aa16.04■□□□□ 0.16
SRGAP2-212ENST00000604925 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
SRGAP2-212ENST00000604925 KIF13AQ9H1H9 1805 aa16.01■□□□□ 0.15
SRGAP2-212ENST00000604925 SYNJ1O43426 1573 aa16■□□□□ 0.15
SRGAP2-212ENST00000604925 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
SRGAP2-212ENST00000604925 HECW2Q9P2P5 1572 aa15.96■□□□□ 0.15
SRGAP2-212ENST00000604925 TARBP1Q13395 1621 aaKnown RBP15.96■□□□□ 0.15
SRGAP2-212ENST00000604925 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
SRGAP2-212ENST00000604925 WIZO95785 1651 aa15.94■□□□□ 0.14
SRGAP2-212ENST00000604925 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
SRGAP2-212ENST00000604925 ILDR2Q71H61 639 aa15.89■□□□□ 0.13
SRGAP2-212ENST00000604925 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
SRGAP2-212ENST00000604925 FAM69CQ0P6D2 419 aa15.87■□□□□ 0.13
SRGAP2-212ENST00000604925 KDM6BO15054 1643 aa15.85■□□□□ 0.13
SRGAP2-212ENST00000604925 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
SRGAP2-212ENST00000604925 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.13
SRGAP2-212ENST00000604925 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
SRGAP2-212ENST00000604925 ADGRL1O94910 1474 aa15.81■□□□□ 0.12
SRGAP2-212ENST00000604925 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
SRGAP2-212ENST00000604925 ABCC10Q5T3U5 1492 aa15.79■□□□□ 0.12
SRGAP2-212ENST00000604925 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.11
SRGAP2-212ENST00000604925 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
SRGAP2-212ENST00000604925 DISP3Q9P2K9 1392 aa15.74■□□□□ 0.11
SRGAP2-212ENST00000604925 SOGA1O94964 1423 aa15.73■□□□□ 0.11
SRGAP2-212ENST00000604925 WDR97A6NE52 1622 aa15.71■□□□□ 0.11
SRGAP2-212ENST00000604925 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
SRGAP2-212ENST00000604925 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
SRGAP2-212ENST00000604925 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
SRGAP2-212ENST00000604925 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
SRGAP2-212ENST00000604925 TSPOAP1O95153 1857 aa15.63■□□□□ 0.09
SRGAP2-212ENST00000604925 CEP170Q5SW79 1584 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms