RNA–Protein interactions for RNA: ENST00000604589.1

RPS28P1-201, Transcript of ribosomal protein S28 pseudogene 1, humanhuman

BASIC

Gene RPS28P1, Length 187 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P1-201ENST00000604589 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
RPS28P1-201ENST00000604589 CCDC180Q9P1Z9 1646 aa16.64■□□□□ 0.25
RPS28P1-201ENST00000604589 ABCC9O60706 1549 aa16.35■□□□□ 0.21
RPS28P1-201ENST00000604589 RB1CC1Q8TDY2 1594 aa15.74■□□□□ 0.11
RPS28P1-201ENST00000604589 NACADO15069 1562 aa15.7■□□□□ 0.1
RPS28P1-201ENST00000604589 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
RPS28P1-201ENST00000604589 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
RPS28P1-201ENST00000604589 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
RPS28P1-201ENST00000604589 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
RPS28P1-201ENST00000604589 UNC13AQ9UPW8 1703 aa15.24■□□□□ 0.03
RPS28P1-201ENST00000604589 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
RPS28P1-201ENST00000604589 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
RPS28P1-201ENST00000604589 BICRAQ9NZM4 1560 aa15.22■□□□□ 0.03
RPS28P1-201ENST00000604589 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
RPS28P1-201ENST00000604589 SCRIBQ14160 1630 aa15.08■□□□□ 0
RPS28P1-201ENST00000604589 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
RPS28P1-201ENST00000604589 CC2D2AQ9P2K1 1620 aa14.8□□□□□ -0.04
RPS28P1-201ENST00000604589 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
RPS28P1-201ENST00000604589 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
RPS28P1-201ENST00000604589 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
RPS28P1-201ENST00000604589 SMARCA4P51532 1647 aa14.46□□□□□ -0.09
RPS28P1-201ENST00000604589 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
RPS28P1-201ENST00000604589 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
RPS28P1-201ENST00000604589 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
RPS28P1-201ENST00000604589 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
RPS28P1-201ENST00000604589 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
RPS28P1-201ENST00000604589 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
RPS28P1-201ENST00000604589 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
RPS28P1-201ENST00000604589 CUX2O14529 1486 aa14.12□□□□□ -0.15
RPS28P1-201ENST00000604589 LAMC3Q9Y6N6 1575 aa14.12□□□□□ -0.15
RPS28P1-201ENST00000604589 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
RPS28P1-201ENST00000604589 WIZO95785 1651 aa14.09□□□□□ -0.15
RPS28P1-201ENST00000604589 NESP48681 1621 aa14.08□□□□□ -0.15
RPS28P1-201ENST00000604589 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
RPS28P1-201ENST00000604589 PDS5BQ9NTI5 1447 aa14.05□□□□□ -0.16
RPS28P1-201ENST00000604589 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
RPS28P1-201ENST00000604589 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.18
RPS28P1-201ENST00000604589 CFTRP13569 1480 aa13.94□□□□□ -0.18
RPS28P1-201ENST00000604589 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
RPS28P1-201ENST00000604589 KIF21AQ7Z4S6 1674 aa13.9□□□□□ -0.18
RPS28P1-201ENST00000604589 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
RPS28P1-201ENST00000604589 WDR62O43379 1518 aa13.86□□□□□ -0.19
RPS28P1-201ENST00000604589 FANCD2Q9BXW9 1451 aa13.86□□□□□ -0.19
RPS28P1-201ENST00000604589 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
RPS28P1-201ENST00000604589 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
RPS28P1-201ENST00000604589 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
RPS28P1-201ENST00000604589 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
RPS28P1-201ENST00000604589 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
RPS28P1-201ENST00000604589 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
RPS28P1-201ENST00000604589 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
RPS28P1-201ENST00000604589 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
RPS28P1-201ENST00000604589 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
RPS28P1-201ENST00000604589 POLA1P09884 1462 aaPredicted RBP13.5□□□□□ -0.25
RPS28P1-201ENST00000604589 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
RPS28P1-201ENST00000604589 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.25
RPS28P1-201ENST00000604589 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
RPS28P1-201ENST00000604589 WDR97A6NE52 1622 aa13.46□□□□□ -0.26
RPS28P1-201ENST00000604589 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
RPS28P1-201ENST00000604589 CUX1P39880 1505 aa13.44□□□□□ -0.26
RPS28P1-201ENST00000604589 SOGA1O94964 1423 aa13.43□□□□□ -0.26
RPS28P1-201ENST00000604589 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
RPS28P1-201ENST00000604589 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.27
RPS28P1-201ENST00000604589 RAD54L2Q9Y4B4 1467 aa13.39□□□□□ -0.27
RPS28P1-201ENST00000604589 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
RPS28P1-201ENST00000604589 ABCA10Q8WWZ4 1543 aa13.34□□□□□ -0.27
RPS28P1-201ENST00000604589 GRIN2BQ13224 1484 aa13.33□□□□□ -0.28
RPS28P1-201ENST00000604589 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
RPS28P1-201ENST00000604589 WRNQ14191 1432 aaPredicted RBP eCLIP13.32□□□□□ -0.28
RPS28P1-201ENST00000604589 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
RPS28P1-201ENST00000604589 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
RPS28P1-201ENST00000604589 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
RPS28P1-201ENST00000604589 GAPVD1Q14C86 1478 aa13.28□□□□□ -0.28
RPS28P1-201ENST00000604589 SYNJ2O15056 1496 aa13.26□□□□□ -0.29
RPS28P1-201ENST00000604589 ABCA5Q8WWZ7 1642 aa13.26□□□□□ -0.29
RPS28P1-201ENST00000604589 CHD1O14646 1710 aa13.25□□□□□ -0.29
RPS28P1-201ENST00000604589 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
RPS28P1-201ENST00000604589 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
RPS28P1-201ENST00000604589 FBLN2P98095 1184 aa13.23□□□□□ -0.29
RPS28P1-201ENST00000604589 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
RPS28P1-201ENST00000604589 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.29
RPS28P1-201ENST00000604589 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.29
RPS28P1-201ENST00000604589 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.29
RPS28P1-201ENST00000604589 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
RPS28P1-201ENST00000604589 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
RPS28P1-201ENST00000604589 CLASP1Q7Z460 1538 aa13.19□□□□□ -0.3
RPS28P1-201ENST00000604589 ERICH3Q5RHP9 1530 aa13.18□□□□□ -0.3
RPS28P1-201ENST00000604589 FHAD1B1AJZ9 1412 aa13.15□□□□□ -0.3
RPS28P1-201ENST00000604589 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
RPS28P1-201ENST00000604589 GRIN2AQ12879 1464 aa13.14□□□□□ -0.31
RPS28P1-201ENST00000604589 NUP160Q12769 1436 aa13.12□□□□□ -0.31
RPS28P1-201ENST00000604589 ARAP1Q96P48 1450 aa13.11□□□□□ -0.31
RPS28P1-201ENST00000604589 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
RPS28P1-201ENST00000604589 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
RPS28P1-201ENST00000604589 CEP170Q5SW79 1584 aa13.04□□□□□ -0.32
RPS28P1-201ENST00000604589 IGF1RP08069 1367 aa13.02□□□□□ -0.33
RPS28P1-201ENST00000604589 CUL7Q14999 1698 aa13□□□□□ -0.33
RPS28P1-201ENST00000604589 SHROOM2Q13796 1616 aa13□□□□□ -0.33
RPS28P1-201ENST00000604589 RUSC2Q8N2Y8 1516 aa12.96□□□□□ -0.33
RPS28P1-201ENST00000604589 KIAA0586Q9BVV6 1533 aa12.94□□□□□ -0.34
RPS28P1-201ENST00000604589 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms