RNA–Protein interactions for RNA: ENST00000604453.1

LINC00904-201, long intergenic non-protein coding RNA 904, humanhuman

TSL 2 BASIC

Gene LINC00904, Length 471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00904-201ENST00000604453 AEBP2Q6ZN18 517 aaPredicted RBP11.89□□□□□ -0.51
LINC00904-201ENST00000604453 CHIC1Q5VXU3 224 aa11.32□□□□□ -0.6
LINC00904-201ENST00000604453 NISCHQ9Y2I1 1504 aa11.15□□□□□ -0.62
LINC00904-201ENST00000604453 SENP3Q9H4L4 574 aaPredicted RBP10.04□□□□□ -0.8
LINC00904-201ENST00000604453 CCDC180Q9P1Z9 1646 aa9.99□□□□□ -0.81
LINC00904-201ENST00000604453 ABCC9O60706 1549 aa9.98□□□□□ -0.81
LINC00904-201ENST00000604453 PHF23Q9BUL5 403 aaPredicted RBP9.98□□□□□ -0.81
LINC00904-201ENST00000604453 POTEDQ86YR6 584 aa9.95□□□□□ -0.82
LINC00904-201ENST00000604453 DCAF8L2P0C7V8 631 aa9.55□□□□□ -0.88
LINC00904-201ENST00000604453 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
LINC00904-201ENST00000604453 NACADO15069 1562 aa9.46□□□□□ -0.89
LINC00904-201ENST00000604453 FOXD1Q16676 465 aa9.4□□□□□ -0.9
LINC00904-201ENST00000604453 PABPN1Q86U42 306 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC00904-201ENST00000604453 MYO15BQ96JP2 1530 aa9.32□□□□□ -0.92
LINC00904-201ENST00000604453 DNAJC5BQ9UF47 199 aa9.28□□□□□ -0.92
LINC00904-201ENST00000604453 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
LINC00904-201ENST00000604453 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
LINC00904-201ENST00000604453 DCAF1Q9Y4B6 1507 aa9.21□□□□□ -0.93
LINC00904-201ENST00000604453 BICRAQ9NZM4 1560 aa9.16□□□□□ -0.94
LINC00904-201ENST00000604453 SHROOM4Q9ULL8 1493 aa9.12□□□□□ -0.95
LINC00904-201ENST00000604453 SCRIBQ14160 1630 aa9.11□□□□□ -0.95
LINC00904-201ENST00000604453 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
LINC00904-201ENST00000604453 CC2D2AQ9P2K1 1620 aa9□□□□□ -0.97
LINC00904-201ENST00000604453 CECR2Q9BXF3 1484 aa9□□□□□ -0.97
LINC00904-201ENST00000604453 EIF4G1Q04637 1599 aaKnown RBP8.99□□□□□ -0.97
LINC00904-201ENST00000604453 PPP6R1Q9UPN7 881 aa8.91□□□□□ -0.98
LINC00904-201ENST00000604453 ADRA2BP18089 450 aa8.9□□□□□ -0.98
LINC00904-201ENST00000604453 PIAS4Q8N2W9 510 aaPredicted RBP8.82□□□□□ -1
LINC00904-201ENST00000604453 NCAPD3P42695 1498 aa8.72□□□□□ -1.01
LINC00904-201ENST00000604453 SMARCA2P51531 1590 aa8.71□□□□□ -1.02
LINC00904-201ENST00000604453 ATAD2BQ9ULI0 1458 aa8.7□□□□□ -1.02
LINC00904-201ENST00000604453 BAZ1AQ9NRL2 1556 aaPredicted RBP8.69□□□□□ -1.02
LINC00904-201ENST00000604453 SMARCA4P51532 1647 aa8.69□□□□□ -1.02
LINC00904-201ENST00000604453 MSH5O43196 834 aa8.68□□□□□ -1.02
LINC00904-201ENST00000604453 ERCC6Q03468 1493 aa8.67□□□□□ -1.02
LINC00904-201ENST00000604453 HMGXB3Q12766 1538 aa8.65□□□□□ -1.02
LINC00904-201ENST00000604453 BAZ1BQ9UIG0 1483 aaKnown RBP8.65□□□□□ -1.02
LINC00904-201ENST00000604453 CUX2O14529 1486 aa8.6□□□□□ -1.03
LINC00904-201ENST00000604453 PEG3Q9GZU2 1588 aa8.58□□□□□ -1.04
LINC00904-201ENST00000604453 MROH2BQ7Z745 1585 aa8.57□□□□□ -1.04
LINC00904-201ENST00000604453 DNAJC5Q9H3Z4 198 aa8.56□□□□□ -1.04
LINC00904-201ENST00000604453 PDS5BQ9NTI5 1447 aa8.54□□□□□ -1.04
LINC00904-201ENST00000604453 NESP48681 1621 aa8.54□□□□□ -1.04
LINC00904-201ENST00000604453 LAMC3Q9Y6N6 1575 aa8.54□□□□□ -1.04
LINC00904-201ENST00000604453 CADPSQ9ULU8 1353 aa8.49□□□□□ -1.05
LINC00904-201ENST00000604453 WIZO95785 1651 aa8.48□□□□□ -1.05
LINC00904-201ENST00000604453 THOC2Q8NI27 1593 aaKnown RBP8.44□□□□□ -1.06
LINC00904-201ENST00000604453 RSF1Q96T23 1441 aaPredicted RBP8.43□□□□□ -1.06
LINC00904-201ENST00000604453 KIF21AQ7Z4S6 1674 aa8.43□□□□□ -1.06
LINC00904-201ENST00000604453 MRC2Q9UBG0 1479 aa8.41□□□□□ -1.06
LINC00904-201ENST00000604453 CEP164Q9UPV0 1460 aa8.4□□□□□ -1.06
LINC00904-201ENST00000604453 TOP2AP11388 1531 aaKnown RBP8.39□□□□□ -1.07
LINC00904-201ENST00000604453 FANCD2Q9BXW9 1451 aa8.38□□□□□ -1.07
LINC00904-201ENST00000604453 CFTRP13569 1480 aa8.37□□□□□ -1.07
LINC00904-201ENST00000604453 WDR62O43379 1518 aa8.36□□□□□ -1.07
LINC00904-201ENST00000604453 CCDC88BA6NC98 1476 aa8.31□□□□□ -1.08
LINC00904-201ENST00000604453 OSCARQ8IYS5 282 aa8.28□□□□□ -1.08
LINC00904-201ENST00000604453 TRIM41Q8WV44 630 aa8.27□□□□□ -1.09
LINC00904-201ENST00000604453 URB2Q14146 1524 aaKnown RBP8.27□□□□□ -1.09
LINC00904-201ENST00000604453 ABCC8Q09428 1581 aa8.27□□□□□ -1.09
LINC00904-201ENST00000604453 PRDM2Q13029 1718 aa8.26□□□□□ -1.09
LINC00904-201ENST00000604453 IFT140Q96RY7 1462 aa8.24□□□□□ -1.09
LINC00904-201ENST00000604453 TOPBP1Q92547 1522 aa8.21□□□□□ -1.1
LINC00904-201ENST00000604453 DNMBPQ6XZF7 1577 aa8.19□□□□□ -1.1
LINC00904-201ENST00000604453 SUPT5HO00267 1087 aaKnown RBP8.19□□□□□ -1.1
LINC00904-201ENST00000604453 FBLN2P98095 1184 aa8.17□□□□□ -1.1
LINC00904-201ENST00000604453 ZNF608Q9ULD9 1512 aaPredicted RBP8.16□□□□□ -1.1
LINC00904-201ENST00000604453 MAPK8IP2Q13387 824 aaPredicted RBP8.15□□□□□ -1.1
LINC00904-201ENST00000604453 SOGA1O94964 1423 aa8.14□□□□□ -1.11
LINC00904-201ENST00000604453 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00904-201ENST00000604453 EIF4G3O43432 1585 aaKnown RBP8.12□□□□□ -1.11
LINC00904-201ENST00000604453 POLA1P09884 1462 aaPredicted RBP8.12□□□□□ -1.11
LINC00904-201ENST00000604453 CHMP7Q8WUX9 453 aaPredicted RBP8.11□□□□□ -1.11
LINC00904-201ENST00000604453 RAD54L2Q9Y4B4 1467 aa8.1□□□□□ -1.11
LINC00904-201ENST00000604453 TARBP1Q13395 1621 aaKnown RBP8.1□□□□□ -1.11
LINC00904-201ENST00000604453 TDRD9Q8NDG6 1382 aaKnown RBP8.1□□□□□ -1.11
LINC00904-201ENST00000604453 FGD5Q6ZNL6 1462 aa8.09□□□□□ -1.11
LINC00904-201ENST00000604453 WDR97A6NE52 1622 aa8.07□□□□□ -1.12
LINC00904-201ENST00000604453 CYB5RLQ6IPT4 315 aa8.07□□□□□ -1.12
LINC00904-201ENST00000604453 RIMBP3CA6NJZ7 1639 aa8.07□□□□□ -1.12
LINC00904-201ENST00000604453 RIMBP3BA6NNM3 1639 aa8.07□□□□□ -1.12
LINC00904-201ENST00000604453 RIMBP3Q9UFD9 1639 aa8.07□□□□□ -1.12
LINC00904-201ENST00000604453 CUX1P39880 1505 aa8.06□□□□□ -1.12
LINC00904-201ENST00000604453 GRIN2BQ13224 1484 aa8.06□□□□□ -1.12
LINC00904-201ENST00000604453 ARHGEF11O15085 1522 aa8.05□□□□□ -1.12
LINC00904-201ENST00000604453 CHD1O14646 1710 aa8.05□□□□□ -1.12
LINC00904-201ENST00000604453 SNAPC4Q5SXM2 1469 aa8.05□□□□□ -1.12
LINC00904-201ENST00000604453 MAGI1Q96QZ7 1491 aaPredicted RBP8.04□□□□□ -1.12
LINC00904-201ENST00000604453 GAPVD1Q14C86 1478 aa8.03□□□□□ -1.12
LINC00904-201ENST00000604453 TRHP20396 242 aaPredicted RBP8.03□□□□□ -1.12
LINC00904-201ENST00000604453 SCAF1Q9H7N4 1312 aaKnown RBP8.03□□□□□ -1.12
LINC00904-201ENST00000604453 SYNJ1O43426 1573 aa8.02□□□□□ -1.13
LINC00904-201ENST00000604453 WRNQ14191 1432 aaPredicted RBP eCLIP8.02□□□□□ -1.13
LINC00904-201ENST00000604453 PPP4R3CPQ6ZMV5 832 aa8.01□□□□□ -1.13
LINC00904-201ENST00000604453 SYNJ2O15056 1496 aa8□□□□□ -1.13
LINC00904-201ENST00000604453 ABCA10Q8WWZ4 1543 aa8□□□□□ -1.13
LINC00904-201ENST00000604453 DMRT2Q9Y5R5 561 aa7.99□□□□□ -1.13
LINC00904-201ENST00000604453 PBRM1Q86U86 1689 aa7.98□□□□□ -1.13
LINC00904-201ENST00000604453 ARAP1Q96P48 1450 aa7.96□□□□□ -1.13
LINC00904-201ENST00000604453 TOP2BQ02880 1626 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms