RNA–Protein interactions for RNA: ENST00000604278.1

AL049829.3-202, humanhuman

BASIC

Gene AL049829.3, Length 711 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049829.3-202ENST00000604278 NISCHQ9Y2I1 1504 aa21.75■■□□□ 1.07
AL049829.3-202ENST00000604278 ABCC9O60706 1549 aa20.91■□□□□ 0.94
AL049829.3-202ENST00000604278 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.89
AL049829.3-202ENST00000604278 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
AL049829.3-202ENST00000604278 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
AL049829.3-202ENST00000604278 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
AL049829.3-202ENST00000604278 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
AL049829.3-202ENST00000604278 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
AL049829.3-202ENST00000604278 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
AL049829.3-202ENST00000604278 NACADO15069 1562 aa19.19■□□□□ 0.66
AL049829.3-202ENST00000604278 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
AL049829.3-202ENST00000604278 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.63
AL049829.3-202ENST00000604278 CECR2Q9BXF3 1484 aa18.99■□□□□ 0.63
AL049829.3-202ENST00000604278 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
AL049829.3-202ENST00000604278 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
AL049829.3-202ENST00000604278 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
AL049829.3-202ENST00000604278 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.57
AL049829.3-202ENST00000604278 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
AL049829.3-202ENST00000604278 CUX2O14529 1486 aa18.58■□□□□ 0.56
AL049829.3-202ENST00000604278 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
AL049829.3-202ENST00000604278 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
AL049829.3-202ENST00000604278 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
AL049829.3-202ENST00000604278 DCAF1Q9Y4B6 1507 aa17.99■□□□□ 0.47
AL049829.3-202ENST00000604278 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
AL049829.3-202ENST00000604278 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
AL049829.3-202ENST00000604278 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
AL049829.3-202ENST00000604278 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
AL049829.3-202ENST00000604278 NESP48681 1621 aa17.67■□□□□ 0.42
AL049829.3-202ENST00000604278 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
AL049829.3-202ENST00000604278 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
AL049829.3-202ENST00000604278 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
AL049829.3-202ENST00000604278 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
AL049829.3-202ENST00000604278 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
AL049829.3-202ENST00000604278 ATAD2BQ9ULI0 1458 aa17.46■□□□□ 0.39
AL049829.3-202ENST00000604278 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
AL049829.3-202ENST00000604278 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
AL049829.3-202ENST00000604278 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
AL049829.3-202ENST00000604278 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
AL049829.3-202ENST00000604278 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
AL049829.3-202ENST00000604278 WDR62O43379 1518 aa17.33■□□□□ 0.37
AL049829.3-202ENST00000604278 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
AL049829.3-202ENST00000604278 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
AL049829.3-202ENST00000604278 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
AL049829.3-202ENST00000604278 ARHGEF11O15085 1522 aa17.23■□□□□ 0.35
AL049829.3-202ENST00000604278 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
AL049829.3-202ENST00000604278 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
AL049829.3-202ENST00000604278 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
AL049829.3-202ENST00000604278 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
AL049829.3-202ENST00000604278 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
AL049829.3-202ENST00000604278 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.32
AL049829.3-202ENST00000604278 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
AL049829.3-202ENST00000604278 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
AL049829.3-202ENST00000604278 FANCD2Q9BXW9 1451 aa16.88■□□□□ 0.29
AL049829.3-202ENST00000604278 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
AL049829.3-202ENST00000604278 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
AL049829.3-202ENST00000604278 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
AL049829.3-202ENST00000604278 CHD1O14646 1710 aa16.73■□□□□ 0.27
AL049829.3-202ENST00000604278 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
AL049829.3-202ENST00000604278 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
AL049829.3-202ENST00000604278 CFTRP13569 1480 aa16.69■□□□□ 0.26
AL049829.3-202ENST00000604278 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
AL049829.3-202ENST00000604278 CLASP1Q7Z460 1538 aa16.54■□□□□ 0.24
AL049829.3-202ENST00000604278 FOXD1Q16676 465 aa16.53■□□□□ 0.24
AL049829.3-202ENST00000604278 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
AL049829.3-202ENST00000604278 FBLN2P98095 1184 aa16.46■□□□□ 0.23
AL049829.3-202ENST00000604278 WIZO95785 1651 aa16.46■□□□□ 0.23
AL049829.3-202ENST00000604278 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
AL049829.3-202ENST00000604278 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.22
AL049829.3-202ENST00000604278 TARBP1Q13395 1621 aaKnown RBP16.42■□□□□ 0.22
AL049829.3-202ENST00000604278 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
AL049829.3-202ENST00000604278 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
AL049829.3-202ENST00000604278 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
AL049829.3-202ENST00000604278 KDM4FA0A1W2PPD8 638 aa16.39■□□□□ 0.21
AL049829.3-202ENST00000604278 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
AL049829.3-202ENST00000604278 KIF13AQ9H1H9 1805 aa16.36■□□□□ 0.21
AL049829.3-202ENST00000604278 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.2
AL049829.3-202ENST00000604278 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
AL049829.3-202ENST00000604278 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
AL049829.3-202ENST00000604278 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
AL049829.3-202ENST00000604278 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
AL049829.3-202ENST00000604278 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
AL049829.3-202ENST00000604278 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
AL049829.3-202ENST00000604278 FBXO41Q8TF61 875 aa16.21■□□□□ 0.19
AL049829.3-202ENST00000604278 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
AL049829.3-202ENST00000604278 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.18
AL049829.3-202ENST00000604278 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
AL049829.3-202ENST00000604278 KDM6BO15054 1643 aa16.17■□□□□ 0.18
AL049829.3-202ENST00000604278 TDRD9Q8NDG6 1382 aaKnown RBP16.14■□□□□ 0.17
AL049829.3-202ENST00000604278 LMTK3Q96Q04 1460 aa16.11■□□□□ 0.17
AL049829.3-202ENST00000604278 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
AL049829.3-202ENST00000604278 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
AL049829.3-202ENST00000604278 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
AL049829.3-202ENST00000604278 SOGA1O94964 1423 aa16.08■□□□□ 0.16
AL049829.3-202ENST00000604278 ADGRL1O94910 1474 aa16.06■□□□□ 0.16
AL049829.3-202ENST00000604278 DIP2BQ9P265 1576 aa16.04■□□□□ 0.16
AL049829.3-202ENST00000604278 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
AL049829.3-202ENST00000604278 FAM69CQ0P6D2 419 aa16.03■□□□□ 0.16
AL049829.3-202ENST00000604278 MAPKBP1O60336 1514 aa16.02■□□□□ 0.15
AL049829.3-202ENST00000604278 PBRM1Q86U86 1689 aa16■□□□□ 0.15
AL049829.3-202ENST00000604278 SOCS7O14512 581 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms