RNA–Protein interactions for RNA: ENST00000604278.1

AL049829.3-202, humanhuman

BASIC

Gene AL049829.3, Length 711 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049829.3-202ENST00000604278 NISCHQ9Y2I1 1504 aa21.75■■□□□ 1.07
AL049829.3-202ENST00000604278 ABCC9O60706 1549 aa20.91■□□□□ 0.94
AL049829.3-202ENST00000604278 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.89
AL049829.3-202ENST00000604278 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
AL049829.3-202ENST00000604278 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
AL049829.3-202ENST00000604278 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
AL049829.3-202ENST00000604278 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
AL049829.3-202ENST00000604278 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
AL049829.3-202ENST00000604278 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
AL049829.3-202ENST00000604278 NACADO15069 1562 aa19.19■□□□□ 0.66
AL049829.3-202ENST00000604278 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
AL049829.3-202ENST00000604278 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.63
AL049829.3-202ENST00000604278 CECR2Q9BXF3 1484 aa18.99■□□□□ 0.63
AL049829.3-202ENST00000604278 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
AL049829.3-202ENST00000604278 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
AL049829.3-202ENST00000604278 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
AL049829.3-202ENST00000604278 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.57
AL049829.3-202ENST00000604278 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
AL049829.3-202ENST00000604278 CUX2O14529 1486 aa18.58■□□□□ 0.56
AL049829.3-202ENST00000604278 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
AL049829.3-202ENST00000604278 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
AL049829.3-202ENST00000604278 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
AL049829.3-202ENST00000604278 DCAF1Q9Y4B6 1507 aa17.99■□□□□ 0.47
AL049829.3-202ENST00000604278 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
AL049829.3-202ENST00000604278 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
AL049829.3-202ENST00000604278 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
AL049829.3-202ENST00000604278 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
AL049829.3-202ENST00000604278 NESP48681 1621 aa17.67■□□□□ 0.42
AL049829.3-202ENST00000604278 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
AL049829.3-202ENST00000604278 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
AL049829.3-202ENST00000604278 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
AL049829.3-202ENST00000604278 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
AL049829.3-202ENST00000604278 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
AL049829.3-202ENST00000604278 ATAD2BQ9ULI0 1458 aa17.46■□□□□ 0.39
AL049829.3-202ENST00000604278 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
AL049829.3-202ENST00000604278 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
AL049829.3-202ENST00000604278 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
AL049829.3-202ENST00000604278 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
AL049829.3-202ENST00000604278 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
AL049829.3-202ENST00000604278 WDR62O43379 1518 aa17.33■□□□□ 0.37
AL049829.3-202ENST00000604278 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
AL049829.3-202ENST00000604278 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
AL049829.3-202ENST00000604278 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
AL049829.3-202ENST00000604278 ARHGEF11O15085 1522 aa17.23■□□□□ 0.35
AL049829.3-202ENST00000604278 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
AL049829.3-202ENST00000604278 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
AL049829.3-202ENST00000604278 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
AL049829.3-202ENST00000604278 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
AL049829.3-202ENST00000604278 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
AL049829.3-202ENST00000604278 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.32
AL049829.3-202ENST00000604278 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
AL049829.3-202ENST00000604278 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
AL049829.3-202ENST00000604278 FANCD2Q9BXW9 1451 aa16.88■□□□□ 0.29
AL049829.3-202ENST00000604278 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
AL049829.3-202ENST00000604278 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
AL049829.3-202ENST00000604278 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
AL049829.3-202ENST00000604278 CHD1O14646 1710 aa16.73■□□□□ 0.27
AL049829.3-202ENST00000604278 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
AL049829.3-202ENST00000604278 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
AL049829.3-202ENST00000604278 CFTRP13569 1480 aa16.69■□□□□ 0.26
AL049829.3-202ENST00000604278 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
AL049829.3-202ENST00000604278 CLASP1Q7Z460 1538 aa16.54■□□□□ 0.24
AL049829.3-202ENST00000604278 FOXD1Q16676 465 aa16.53■□□□□ 0.24
AL049829.3-202ENST00000604278 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
AL049829.3-202ENST00000604278 FBLN2P98095 1184 aa16.46■□□□□ 0.23
AL049829.3-202ENST00000604278 WIZO95785 1651 aa16.46■□□□□ 0.23
AL049829.3-202ENST00000604278 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
AL049829.3-202ENST00000604278 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.22
AL049829.3-202ENST00000604278 TARBP1Q13395 1621 aaKnown RBP16.42■□□□□ 0.22
AL049829.3-202ENST00000604278 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
AL049829.3-202ENST00000604278 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
AL049829.3-202ENST00000604278 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
AL049829.3-202ENST00000604278 KDM4FA0A1W2PPD8 638 aa16.39■□□□□ 0.21
AL049829.3-202ENST00000604278 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
AL049829.3-202ENST00000604278 KIF13AQ9H1H9 1805 aa16.36■□□□□ 0.21
AL049829.3-202ENST00000604278 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.2
AL049829.3-202ENST00000604278 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
AL049829.3-202ENST00000604278 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
AL049829.3-202ENST00000604278 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
AL049829.3-202ENST00000604278 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
AL049829.3-202ENST00000604278 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
AL049829.3-202ENST00000604278 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
AL049829.3-202ENST00000604278 FBXO41Q8TF61 875 aa16.21■□□□□ 0.19
AL049829.3-202ENST00000604278 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
AL049829.3-202ENST00000604278 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.18
AL049829.3-202ENST00000604278 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
AL049829.3-202ENST00000604278 KDM6BO15054 1643 aa16.17■□□□□ 0.18
AL049829.3-202ENST00000604278 TDRD9Q8NDG6 1382 aaKnown RBP16.14■□□□□ 0.17
AL049829.3-202ENST00000604278 LMTK3Q96Q04 1460 aa16.11■□□□□ 0.17
AL049829.3-202ENST00000604278 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
AL049829.3-202ENST00000604278 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
AL049829.3-202ENST00000604278 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
AL049829.3-202ENST00000604278 SOGA1O94964 1423 aa16.08■□□□□ 0.16
AL049829.3-202ENST00000604278 ADGRL1O94910 1474 aa16.06■□□□□ 0.16
AL049829.3-202ENST00000604278 DIP2BQ9P265 1576 aa16.04■□□□□ 0.16
AL049829.3-202ENST00000604278 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
AL049829.3-202ENST00000604278 FAM69CQ0P6D2 419 aa16.03■□□□□ 0.16
AL049829.3-202ENST00000604278 MAPKBP1O60336 1514 aa16.02■□□□□ 0.15
AL049829.3-202ENST00000604278 PBRM1Q86U86 1689 aa16■□□□□ 0.15
AL049829.3-202ENST00000604278 SOCS7O14512 581 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms