RNA–Protein interactions for RNA: ENST00000604258.5

NAMA-204, Transcript of non-protein coding RNA, associated with MAP kinase pathway and growth arrest, humanhuman

TSL 1 (best) BASIC

Gene NAMA, Length 2,133 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAMA-204ENST00000604258 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
NAMA-204ENST00000604258 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
NAMA-204ENST00000604258 ABCC9O60706 1549 aa20.72■□□□□ 0.91
NAMA-204ENST00000604258 RB1CC1Q8TDY2 1594 aa19.9■□□□□ 0.78
NAMA-204ENST00000604258 NACADO15069 1562 aa19.84■□□□□ 0.77
NAMA-204ENST00000604258 DCAF8L2P0C7V8 631 aa19.76■□□□□ 0.75
NAMA-204ENST00000604258 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
NAMA-204ENST00000604258 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
NAMA-204ENST00000604258 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
NAMA-204ENST00000604258 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
NAMA-204ENST00000604258 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
NAMA-204ENST00000604258 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
NAMA-204ENST00000604258 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
NAMA-204ENST00000604258 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
NAMA-204ENST00000604258 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
NAMA-204ENST00000604258 EIF4G1Q04637 1599 aaKnown RBP18.79■□□□□ 0.6
NAMA-204ENST00000604258 CC2D2AQ9P2K1 1620 aa18.75■□□□□ 0.59
NAMA-204ENST00000604258 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
NAMA-204ENST00000604258 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
NAMA-204ENST00000604258 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
NAMA-204ENST00000604258 NCAPD3P42695 1498 aa18.3■□□□□ 0.52
NAMA-204ENST00000604258 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
NAMA-204ENST00000604258 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
NAMA-204ENST00000604258 HMGXB3Q12766 1538 aa18.21■□□□□ 0.51
NAMA-204ENST00000604258 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
NAMA-204ENST00000604258 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
NAMA-204ENST00000604258 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.49
NAMA-204ENST00000604258 WIZO95785 1651 aa17.97■□□□□ 0.47
NAMA-204ENST00000604258 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
NAMA-204ENST00000604258 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
NAMA-204ENST00000604258 NESP48681 1621 aa17.88■□□□□ 0.45
NAMA-204ENST00000604258 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
NAMA-204ENST00000604258 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
NAMA-204ENST00000604258 CUX2O14529 1486 aa17.77■□□□□ 0.44
NAMA-204ENST00000604258 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
NAMA-204ENST00000604258 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
NAMA-204ENST00000604258 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
NAMA-204ENST00000604258 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
NAMA-204ENST00000604258 CFTRP13569 1480 aa17.62■□□□□ 0.41
NAMA-204ENST00000604258 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
NAMA-204ENST00000604258 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
NAMA-204ENST00000604258 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
NAMA-204ENST00000604258 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
NAMA-204ENST00000604258 WDR62O43379 1518 aa17.5■□□□□ 0.39
NAMA-204ENST00000604258 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
NAMA-204ENST00000604258 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
NAMA-204ENST00000604258 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
NAMA-204ENST00000604258 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
NAMA-204ENST00000604258 ABCC8Q09428 1581 aa17.27■□□□□ 0.36
NAMA-204ENST00000604258 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
NAMA-204ENST00000604258 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
NAMA-204ENST00000604258 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
NAMA-204ENST00000604258 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
NAMA-204ENST00000604258 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
NAMA-204ENST00000604258 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
NAMA-204ENST00000604258 CUX1P39880 1505 aa17.06■□□□□ 0.32
NAMA-204ENST00000604258 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
NAMA-204ENST00000604258 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
NAMA-204ENST00000604258 SOGA1O94964 1423 aa17.02■□□□□ 0.32
NAMA-204ENST00000604258 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
NAMA-204ENST00000604258 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
NAMA-204ENST00000604258 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.31
NAMA-204ENST00000604258 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
NAMA-204ENST00000604258 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
NAMA-204ENST00000604258 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
NAMA-204ENST00000604258 TOP2BQ02880 1626 aa16.89■□□□□ 0.29
NAMA-204ENST00000604258 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
NAMA-204ENST00000604258 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
NAMA-204ENST00000604258 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
NAMA-204ENST00000604258 CHD1O14646 1710 aa16.85■□□□□ 0.29
NAMA-204ENST00000604258 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
NAMA-204ENST00000604258 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
NAMA-204ENST00000604258 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
NAMA-204ENST00000604258 MAGI1Q96QZ7 1491 aaPredicted RBP16.84■□□□□ 0.29
NAMA-204ENST00000604258 FBLN2P98095 1184 aa16.83■□□□□ 0.28
NAMA-204ENST00000604258 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
NAMA-204ENST00000604258 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
NAMA-204ENST00000604258 CHMP7Q8WUX9 453 aaPredicted RBP16.76■□□□□ 0.27
NAMA-204ENST00000604258 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
NAMA-204ENST00000604258 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
NAMA-204ENST00000604258 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
NAMA-204ENST00000604258 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
NAMA-204ENST00000604258 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
NAMA-204ENST00000604258 ARHGEF11O15085 1522 aa16.72■□□□□ 0.27
NAMA-204ENST00000604258 ERICH3Q5RHP9 1530 aa16.68■□□□□ 0.26
NAMA-204ENST00000604258 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
NAMA-204ENST00000604258 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
NAMA-204ENST00000604258 GRIN2AQ12879 1464 aa16.63■□□□□ 0.25
NAMA-204ENST00000604258 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
NAMA-204ENST00000604258 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
NAMA-204ENST00000604258 NUP160Q12769 1436 aa16.56■□□□□ 0.24
NAMA-204ENST00000604258 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
NAMA-204ENST00000604258 CYB5RLQ6IPT4 315 aa16.56■□□□□ 0.24
NAMA-204ENST00000604258 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
NAMA-204ENST00000604258 CUL7Q14999 1698 aa16.51■□□□□ 0.23
NAMA-204ENST00000604258 IGF1RP08069 1367 aa16.5■□□□□ 0.23
NAMA-204ENST00000604258 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
NAMA-204ENST00000604258 RUSC2Q8N2Y8 1516 aa16.42■□□□□ 0.22
NAMA-204ENST00000604258 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
NAMA-204ENST00000604258 ERCC6L2Q5T890 1561 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms