RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 NISCHQ9Y2I1 1504 aa8.25□□□□□ -1.09
VCAM1-205ENST00000603679 CCDC180Q9P1Z9 1646 aa8.04□□□□□ -1.12
VCAM1-205ENST00000603679 MYO15BQ96JP2 1530 aa7.58□□□□□ -1.2
VCAM1-205ENST00000603679 SHROOM4Q9ULL8 1493 aa7.54□□□□□ -1.2
VCAM1-205ENST00000603679 UNC13AQ9UPW8 1703 aa7.44□□□□□ -1.22
VCAM1-205ENST00000603679 NACADO15069 1562 aa7.37□□□□□ -1.23
VCAM1-205ENST00000603679 CHIC1Q5VXU3 224 aa7.35□□□□□ -1.23
VCAM1-205ENST00000603679 RB1CC1Q8TDY2 1594 aa7.33□□□□□ -1.24
VCAM1-205ENST00000603679 DCAF1Q9Y4B6 1507 aa7.3□□□□□ -1.24
VCAM1-205ENST00000603679 BICRAQ9NZM4 1560 aa7.22□□□□□ -1.25
VCAM1-205ENST00000603679 ABCC9O60706 1549 aa7.12□□□□□ -1.27
VCAM1-205ENST00000603679 AEBP2Q6ZN18 517 aaPredicted RBP6.98□□□□□ -1.29
VCAM1-205ENST00000603679 ZCCHC6Q5VYS8 1495 aaKnown RBP6.91□□□□□ -1.3
VCAM1-205ENST00000603679 CC2D2AQ9P2K1 1620 aa6.9□□□□□ -1.31
VCAM1-205ENST00000603679 EIF4G1Q04637 1599 aaKnown RBP6.88□□□□□ -1.31
VCAM1-205ENST00000603679 PEG3Q9GZU2 1588 aa6.87□□□□□ -1.31
VCAM1-205ENST00000603679 CUX2O14529 1486 aa6.87□□□□□ -1.31
VCAM1-205ENST00000603679 SMARCA2P51531 1590 aa6.8□□□□□ -1.32
VCAM1-205ENST00000603679 DNAJC5BQ9UF47 199 aa6.8□□□□□ -1.32
VCAM1-205ENST00000603679 HMGXB3Q12766 1538 aa6.79□□□□□ -1.32
VCAM1-205ENST00000603679 PRDM2Q13029 1718 aa6.76□□□□□ -1.33
VCAM1-205ENST00000603679 THOC2Q8NI27 1593 aaKnown RBP6.76□□□□□ -1.33
VCAM1-205ENST00000603679 NCAPD3P42695 1498 aa6.66□□□□□ -1.34
VCAM1-205ENST00000603679 CECR2Q9BXF3 1484 aa6.66□□□□□ -1.34
VCAM1-205ENST00000603679 LAMC3Q9Y6N6 1575 aa6.65□□□□□ -1.35
VCAM1-205ENST00000603679 WDR97A6NE52 1622 aa6.61□□□□□ -1.35
VCAM1-205ENST00000603679 DNAJC5Q9H3Z4 198 aa6.59□□□□□ -1.35
VCAM1-205ENST00000603679 WDR62O43379 1518 aa6.57□□□□□ -1.36
VCAM1-205ENST00000603679 SMARCA4P51532 1647 aa6.57□□□□□ -1.36
VCAM1-205ENST00000603679 KIF21AQ7Z4S6 1674 aa6.52□□□□□ -1.37
VCAM1-205ENST00000603679 SCRIBQ14160 1630 aa6.51□□□□□ -1.37
VCAM1-205ENST00000603679 BAZ1AQ9NRL2 1556 aaPredicted RBP6.45□□□□□ -1.38
VCAM1-205ENST00000603679 PHF23Q9BUL5 403 aaPredicted RBP6.45□□□□□ -1.38
VCAM1-205ENST00000603679 ATAD2BQ9ULI0 1458 aa6.44□□□□□ -1.38
VCAM1-205ENST00000603679 BAZ1BQ9UIG0 1483 aaKnown RBP6.37□□□□□ -1.39
VCAM1-205ENST00000603679 MRC2Q9UBG0 1479 aa6.33□□□□□ -1.4
VCAM1-205ENST00000603679 RIMBP3CA6NJZ7 1639 aa6.29□□□□□ -1.4
VCAM1-205ENST00000603679 RIMBP3BA6NNM3 1639 aa6.29□□□□□ -1.4
VCAM1-205ENST00000603679 TARBP1Q13395 1621 aaKnown RBP6.29□□□□□ -1.4
VCAM1-205ENST00000603679 RIMBP3Q9UFD9 1639 aa6.29□□□□□ -1.4
VCAM1-205ENST00000603679 CLASP1Q7Z460 1538 aa6.29□□□□□ -1.4
VCAM1-205ENST00000603679 NESP48681 1621 aa6.28□□□□□ -1.4
VCAM1-205ENST00000603679 CFTRP13569 1480 aa6.27□□□□□ -1.41
VCAM1-205ENST00000603679 SHROOM2Q13796 1616 aa6.27□□□□□ -1.41
VCAM1-205ENST00000603679 TOP2AP11388 1531 aaKnown RBP6.24□□□□□ -1.41
VCAM1-205ENST00000603679 PDS5BQ9NTI5 1447 aa6.24□□□□□ -1.41
VCAM1-205ENST00000603679 ABCC8Q09428 1581 aa6.23□□□□□ -1.41
VCAM1-205ENST00000603679 RSF1Q96T23 1441 aaPredicted RBP6.23□□□□□ -1.41
VCAM1-205ENST00000603679 CHD1O14646 1710 aa6.22□□□□□ -1.41
VCAM1-205ENST00000603679 PLPPR3Q6T4P5 718 aa6.22□□□□□ -1.41
VCAM1-205ENST00000603679 PABPN1Q86U42 306 aaKnown RBP eCLIP6.21□□□□□ -1.42
VCAM1-205ENST00000603679 DNMBPQ6XZF7 1577 aa6.19□□□□□ -1.42
VCAM1-205ENST00000603679 EIF4G3O43432 1585 aaKnown RBP6.18□□□□□ -1.42
VCAM1-205ENST00000603679 IFT140Q96RY7 1462 aa6.17□□□□□ -1.42
VCAM1-205ENST00000603679 PBRM1Q86U86 1689 aa6.16□□□□□ -1.42
VCAM1-205ENST00000603679 MROH2BQ7Z745 1585 aa6.16□□□□□ -1.42
VCAM1-205ENST00000603679 CADPSQ9ULU8 1353 aa6.16□□□□□ -1.42
VCAM1-205ENST00000603679 KIF13AQ9H1H9 1805 aa6.16□□□□□ -1.42
VCAM1-205ENST00000603679 ERCC6Q03468 1493 aa6.15□□□□□ -1.42
VCAM1-205ENST00000603679 URB2Q14146 1524 aaKnown RBP6.15□□□□□ -1.42
VCAM1-205ENST00000603679 ABCA5Q8WWZ7 1642 aa6.15□□□□□ -1.42
VCAM1-205ENST00000603679 CEP164Q9UPV0 1460 aa6.14□□□□□ -1.43
VCAM1-205ENST00000603679 ARHGEF11O15085 1522 aa6.12□□□□□ -1.43
VCAM1-205ENST00000603679 WIZO95785 1651 aa6.12□□□□□ -1.43
VCAM1-205ENST00000603679 BIVM-ERCC5R4GMW8 1640 aa6.1□□□□□ -1.43
VCAM1-205ENST00000603679 FANCD2Q9BXW9 1451 aa6.08□□□□□ -1.44
VCAM1-205ENST00000603679 EHMT2Q96KQ7 1210 aa6.06□□□□□ -1.44
VCAM1-205ENST00000603679 SENP3Q9H4L4 574 aaPredicted RBP6.06□□□□□ -1.44
VCAM1-205ENST00000603679 MAGI1Q96QZ7 1491 aaPredicted RBP6.06□□□□□ -1.44
VCAM1-205ENST00000603679 SYNJ1O43426 1573 aa6.05□□□□□ -1.44
VCAM1-205ENST00000603679 MAPKBP1O60336 1514 aa6.05□□□□□ -1.44
VCAM1-205ENST00000603679 TOPBP1Q92547 1522 aa6.05□□□□□ -1.44
VCAM1-205ENST00000603679 ARAP1Q96P48 1450 aa6.04□□□□□ -1.44
VCAM1-205ENST00000603679 GLI2P10070 1586 aa6.04□□□□□ -1.44
VCAM1-205ENST00000603679 PPRC1Q5VV67 1664 aaKnown RBP6.03□□□□□ -1.44
VCAM1-205ENST00000603679 SLC24A1O60721 1099 aa6.01□□□□□ -1.45
VCAM1-205ENST00000603679 ADAMTS12P58397 1594 aa6□□□□□ -1.45
VCAM1-205ENST00000603679 ERICH3Q5RHP9 1530 aa5.96□□□□□ -1.45
VCAM1-205ENST00000603679 ABCA10Q8WWZ4 1543 aa5.96□□□□□ -1.45
VCAM1-205ENST00000603679 NUP160Q12769 1436 aa5.96□□□□□ -1.46
VCAM1-205ENST00000603679 MAP3K4Q9Y6R4 1608 aa5.95□□□□□ -1.46
VCAM1-205ENST00000603679 RUSC2Q8N2Y8 1516 aa5.95□□□□□ -1.46
VCAM1-205ENST00000603679 DIP2BQ9P265 1576 aa5.94□□□□□ -1.46
VCAM1-205ENST00000603679 SYNJ2O15056 1496 aa5.94□□□□□ -1.46
VCAM1-205ENST00000603679 ERCC6L2Q5T890 1561 aa5.93□□□□□ -1.46
VCAM1-205ENST00000603679 TOP2BQ02880 1626 aa5.92□□□□□ -1.46
VCAM1-205ENST00000603679 POLA1P09884 1462 aaPredicted RBP5.92□□□□□ -1.46
VCAM1-205ENST00000603679 CUL7Q14999 1698 aa5.92□□□□□ -1.46
VCAM1-205ENST00000603679 CEP170Q5SW79 1584 aa5.91□□□□□ -1.46
VCAM1-205ENST00000603679 ZNF608Q9ULD9 1512 aaPredicted RBP5.9□□□□□ -1.47
VCAM1-205ENST00000603679 KCNA4P22459 653 aa5.89□□□□□ -1.47
VCAM1-205ENST00000603679 KIAA0586Q9BVV6 1533 aa5.89□□□□□ -1.47
VCAM1-205ENST00000603679 UHRF1BP1LA0JNW5 1464 aa5.88□□□□□ -1.47
VCAM1-205ENST00000603679 CCDC88BA6NC98 1476 aa5.88□□□□□ -1.47
VCAM1-205ENST00000603679 GRIN2BQ13224 1484 aa5.88□□□□□ -1.47
VCAM1-205ENST00000603679 CUX1P39880 1505 aa5.88□□□□□ -1.47
VCAM1-205ENST00000603679 ADCY10Q96PN6 1610 aa5.86□□□□□ -1.47
VCAM1-205ENST00000603679 CFAP43Q8NDM7 1665 aa5.86□□□□□ -1.47
VCAM1-205ENST00000603679 KDM5BQ9UGL1 1544 aa5.85□□□□□ -1.47
VCAM1-205ENST00000603679 OSCARQ8IYS5 282 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms