RNA–Protein interactions for RNA: ENST00000603669.5

GRAMD1A-213, Transcript of GRAM domain containing 1A, humanhuman

TSL 5

Gene GRAMD1A, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-213ENST00000603669 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
GRAMD1A-213ENST00000603669 ABCC9O60706 1549 aa35.1■■■■□ 3.21
GRAMD1A-213ENST00000603669 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
GRAMD1A-213ENST00000603669 DNAJC5BQ9UF47 199 aa33.38■■■□□ 2.93
GRAMD1A-213ENST00000603669 RB1CC1Q8TDY2 1594 aa33.12■■■□□ 2.89
GRAMD1A-213ENST00000603669 DCAF8L2P0C7V8 631 aa32.87■■■□□ 2.85
GRAMD1A-213ENST00000603669 NACADO15069 1562 aa32.81■■■□□ 2.84
GRAMD1A-213ENST00000603669 PABPN1Q86U42 306 aaKnown RBP eCLIP32.74■■■□□ 2.83
GRAMD1A-213ENST00000603669 UNC13AQ9UPW8 1703 aa32.31■■■□□ 2.76
GRAMD1A-213ENST00000603669 MYO15BQ96JP2 1530 aa32.21■■■□□ 2.75
GRAMD1A-213ENST00000603669 BICRAQ9NZM4 1560 aa32.21■■■□□ 2.75
GRAMD1A-213ENST00000603669 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
GRAMD1A-213ENST00000603669 DCAF1Q9Y4B6 1507 aa31.68■■■□□ 2.66
GRAMD1A-213ENST00000603669 CECR2Q9BXF3 1484 aa31.62■■■□□ 2.65
GRAMD1A-213ENST00000603669 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
GRAMD1A-213ENST00000603669 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
GRAMD1A-213ENST00000603669 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
GRAMD1A-213ENST00000603669 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
GRAMD1A-213ENST00000603669 DNAJC5Q9H3Z4 198 aa30.84■■■□□ 2.53
GRAMD1A-213ENST00000603669 NCAPD3P42695 1498 aa30.38■■■□□ 2.45
GRAMD1A-213ENST00000603669 CUX2O14529 1486 aa30.28■■■□□ 2.44
GRAMD1A-213ENST00000603669 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
GRAMD1A-213ENST00000603669 ATAD2BQ9ULI0 1458 aa30.24■■■□□ 2.43
GRAMD1A-213ENST00000603669 NESP48681 1621 aa30.05■■■□□ 2.4
GRAMD1A-213ENST00000603669 SMARCA2P51531 1590 aa30.05■■■□□ 2.4
GRAMD1A-213ENST00000603669 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
GRAMD1A-213ENST00000603669 HMGXB3Q12766 1538 aa30.01■■■□□ 2.39
GRAMD1A-213ENST00000603669 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.38
GRAMD1A-213ENST00000603669 BAZ1AQ9NRL2 1556 aaPredicted RBP29.84■■■□□ 2.37
GRAMD1A-213ENST00000603669 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
GRAMD1A-213ENST00000603669 MROH2BQ7Z745 1585 aa29.68■■■□□ 2.34
GRAMD1A-213ENST00000603669 THOC2Q8NI27 1593 aaKnown RBP29.68■■■□□ 2.34
GRAMD1A-213ENST00000603669 LAMC3Q9Y6N6 1575 aa29.65■■■□□ 2.34
GRAMD1A-213ENST00000603669 PDS5BQ9NTI5 1447 aa29.58■■■□□ 2.33
GRAMD1A-213ENST00000603669 KIF21AQ7Z4S6 1674 aa29.51■■■□□ 2.31
GRAMD1A-213ENST00000603669 CADPSQ9ULU8 1353 aa29.47■■■□□ 2.31
GRAMD1A-213ENST00000603669 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
GRAMD1A-213ENST00000603669 MRC2Q9UBG0 1479 aa29.31■■■□□ 2.28
GRAMD1A-213ENST00000603669 WIZO95785 1651 aa29.27■■■□□ 2.28
GRAMD1A-213ENST00000603669 WDR62O43379 1518 aa29.22■■■□□ 2.27
GRAMD1A-213ENST00000603669 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
GRAMD1A-213ENST00000603669 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
GRAMD1A-213ENST00000603669 CFTRP13569 1480 aa29.02■■■□□ 2.24
GRAMD1A-213ENST00000603669 OSCARQ8IYS5 282 aa29.01■■■□□ 2.23
GRAMD1A-213ENST00000603669 RSF1Q96T23 1441 aaPredicted RBP28.96■■■□□ 2.23
GRAMD1A-213ENST00000603669 URB2Q14146 1524 aaKnown RBP28.89■■■□□ 2.21
GRAMD1A-213ENST00000603669 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
GRAMD1A-213ENST00000603669 ZNF608Q9ULD9 1512 aaPredicted RBP28.63■■■□□ 2.17
GRAMD1A-213ENST00000603669 CCDC88BA6NC98 1476 aa28.62■■■□□ 2.17
GRAMD1A-213ENST00000603669 IFT140Q96RY7 1462 aa28.57■■■□□ 2.16
GRAMD1A-213ENST00000603669 RIMBP3CA6NJZ7 1639 aa28.52■■■□□ 2.16
GRAMD1A-213ENST00000603669 RIMBP3BA6NNM3 1639 aa28.52■■■□□ 2.16
GRAMD1A-213ENST00000603669 RIMBP3Q9UFD9 1639 aa28.52■■■□□ 2.16
GRAMD1A-213ENST00000603669 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
GRAMD1A-213ENST00000603669 PRDM2Q13029 1718 aa28.49■■■□□ 2.15
GRAMD1A-213ENST00000603669 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
GRAMD1A-213ENST00000603669 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
GRAMD1A-213ENST00000603669 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
GRAMD1A-213ENST00000603669 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.138e-22■■■■■ 116.7
GRAMD1A-213ENST00000603669 EIF4G3O43432 1585 aaKnown RBP28.33■■■□□ 2.12
GRAMD1A-213ENST00000603669 FBLN2P98095 1184 aa28.31■■■□□ 2.12
GRAMD1A-213ENST00000603669 DNMBPQ6XZF7 1577 aa28.3■■■□□ 2.12
GRAMD1A-213ENST00000603669 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
GRAMD1A-213ENST00000603669 TRHP20396 242 aaPredicted RBP28.19■■■□□ 2.1
GRAMD1A-213ENST00000603669 POLA1P09884 1462 aaPredicted RBP28.19■■■□□ 2.1
GRAMD1A-213ENST00000603669 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
GRAMD1A-213ENST00000603669 CHD1O14646 1710 aa28.16■■■□□ 2.1
GRAMD1A-213ENST00000603669 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
GRAMD1A-213ENST00000603669 ARAP1Q96P48 1450 aa28.14■■■□□ 2.09
GRAMD1A-213ENST00000603669 SOGA1O94964 1423 aa28.12■■■□□ 2.09
GRAMD1A-213ENST00000603669 CHMP7Q8WUX9 453 aaPredicted RBP28■■■□□ 2.07
GRAMD1A-213ENST00000603669 SNAPC4Q5SXM2 1469 aa27.97■■■□□ 2.07
GRAMD1A-213ENST00000603669 FGD5Q6ZNL6 1462 aa27.96■■■□□ 2.07
GRAMD1A-213ENST00000603669 CUX1P39880 1505 aa27.88■■■□□ 2.05
GRAMD1A-213ENST00000603669 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
GRAMD1A-213ENST00000603669 GRIN2BQ13224 1484 aa27.84■■■□□ 2.05
GRAMD1A-213ENST00000603669 MAGI1Q96QZ7 1491 aaPredicted RBP27.84■■■□□ 2.05
GRAMD1A-213ENST00000603669 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
GRAMD1A-213ENST00000603669 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
GRAMD1A-213ENST00000603669 SYNJ2O15056 1496 aa27.79■■■□□ 2.04
GRAMD1A-213ENST00000603669 GAPVD1Q14C86 1478 aa27.72■■■□□ 2.03
GRAMD1A-213ENST00000603669 ABCA10Q8WWZ4 1543 aa27.61■■■□□ 2.01
GRAMD1A-213ENST00000603669 AEBP2Q6ZN18 517 aaPredicted RBP27.6■■■□□ 2.01
GRAMD1A-213ENST00000603669 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
GRAMD1A-213ENST00000603669 SUPT5HO00267 1087 aaKnown RBP27.57■■■□□ 2
GRAMD1A-213ENST00000603669 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
GRAMD1A-213ENST00000603669 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
GRAMD1A-213ENST00000603669 GRIN2AQ12879 1464 aa27.48■■□□□ 1.99
GRAMD1A-213ENST00000603669 WRNQ14191 1432 aaPredicted RBP eCLIP27.47■■□□□ 1.999e-6■■■■■ 50.1
GRAMD1A-213ENST00000603669 NUP160Q12769 1436 aa27.41■■□□□ 1.98
GRAMD1A-213ENST00000603669 CEP170Q5SW79 1584 aa27.39■■□□□ 1.97
GRAMD1A-213ENST00000603669 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
GRAMD1A-213ENST00000603669 FHAD1B1AJZ9 1412 aa27.35■■□□□ 1.97
GRAMD1A-213ENST00000603669 TOP2BQ02880 1626 aa27.28■■□□□ 1.96
GRAMD1A-213ENST00000603669 JPH4Q96JJ6 628 aa27.26■■□□□ 1.95
GRAMD1A-213ENST00000603669 SHROOM2Q13796 1616 aa27.25■■□□□ 1.95
GRAMD1A-213ENST00000603669 BIVM-ERCC5R4GMW8 1640 aa27.24■■□□□ 1.95
GRAMD1A-213ENST00000603669 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
GRAMD1A-213ENST00000603669 ERICH3Q5RHP9 1530 aa27.22■■□□□ 1.95
GRAMD1A-213ENST00000603669 FAM69CQ0P6D2 419 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms