RNA–Protein interactions for RNA: ENST00000603641.1

GALNT6-207, Transcript of polypeptide N-acetylgalactosaminyltransferase 6, humanhuman

TSL 1 (best)

Gene GALNT6, Length 1,859 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT6-207ENST00000603641 NISCHQ9Y2I1 1504 aa49.37■■■■■ 5.49
GALNT6-207ENST00000603641 CCDC180Q9P1Z9 1646 aa43.3■■■■■ 4.52
GALNT6-207ENST00000603641 ZCCHC6Q5VYS8 1495 aaKnown RBP41.39■■■■■ 4.22
GALNT6-207ENST00000603641 ABCC9O60706 1549 aa41.28■■■■■ 4.2
GALNT6-207ENST00000603641 DCAF8L2P0C7V8 631 aa40.94■■■■■ 4.14
GALNT6-207ENST00000603641 DCAF1Q9Y4B6 1507 aa40.81■■■■■ 4.12
GALNT6-207ENST00000603641 MYO15BQ96JP2 1530 aa40.49■■■■■ 4.07
GALNT6-207ENST00000603641 NACADO15069 1562 aa40.4■■■■■ 4.06
GALNT6-207ENST00000603641 RB1CC1Q8TDY2 1594 aa40.17■■■■■ 4.02
GALNT6-207ENST00000603641 SHROOM4Q9ULL8 1493 aa40■■■■□ 3.99
GALNT6-207ENST00000603641 SCRIBQ14160 1630 aa39.76■■■■□ 3.96
GALNT6-207ENST00000603641 UNC13AQ9UPW8 1703 aa39.37■■■■□ 3.89
GALNT6-207ENST00000603641 BICRAQ9NZM4 1560 aa38.91■■■■□ 3.82
GALNT6-207ENST00000603641 PABPN1Q86U42 306 aaKnown RBP eCLIP38.82■■■■□ 3.81
GALNT6-207ENST00000603641 CECR2Q9BXF3 1484 aa38.37■■■■□ 3.73
GALNT6-207ENST00000603641 SUPT5HO00267 1087 aaKnown RBP38.28■■■■□ 3.72
GALNT6-207ENST00000603641 BAZ1AQ9NRL2 1556 aaPredicted RBP38.19■■■■□ 3.7
GALNT6-207ENST00000603641 RSF1Q96T23 1441 aaPredicted RBP38.12■■■■□ 3.69
GALNT6-207ENST00000603641 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
GALNT6-207ENST00000603641 SMARCA4P51532 1647 aa38.07■■■■□ 3.68
GALNT6-207ENST00000603641 WIZO95785 1651 aa37.82■■■■□ 3.65
GALNT6-207ENST00000603641 EIF4G1Q04637 1599 aaKnown RBP37.81■■■■□ 3.64
GALNT6-207ENST00000603641 PEG3Q9GZU2 1588 aa37.6■■■■□ 3.61
GALNT6-207ENST00000603641 SMARCA2P51531 1590 aa37.52■■■■□ 3.6
GALNT6-207ENST00000603641 ATAD2BQ9ULI0 1458 aa37.51■■■■□ 3.59
GALNT6-207ENST00000603641 TOP2AP11388 1531 aaKnown RBP37.41■■■■□ 3.58
GALNT6-207ENST00000603641 CC2D2AQ9P2K1 1620 aa37.36■■■■□ 3.57
GALNT6-207ENST00000603641 BAZ1BQ9UIG0 1483 aaKnown RBP37.32■■■■□ 3.56
GALNT6-207ENST00000603641 NCAPD3P42695 1498 aa37.25■■■■□ 3.55
GALNT6-207ENST00000603641 HMGXB3Q12766 1538 aa37.2■■■■□ 3.55
GALNT6-207ENST00000603641 CCDC88BA6NC98 1476 aa36.99■■■■□ 3.51
GALNT6-207ENST00000603641 DNAJC5BQ9UF47 199 aa36.7■■■■□ 3.47
GALNT6-207ENST00000603641 CHIC1Q5VXU3 224 aa36.37■■■■□ 3.41
GALNT6-207ENST00000603641 CFTRP13569 1480 aa36.32■■■■□ 3.4
GALNT6-207ENST00000603641 CADPSQ9ULU8 1353 aa36.28■■■■□ 3.4
GALNT6-207ENST00000603641 PRDM2Q13029 1718 aa36.21■■■■□ 3.39
GALNT6-207ENST00000603641 ABCC8Q09428 1581 aa36.12■■■■□ 3.37
GALNT6-207ENST00000603641 LAMC3Q9Y6N6 1575 aa36.11■■■■□ 3.37
GALNT6-207ENST00000603641 NESP48681 1621 aa36.1■■■■□ 3.37
GALNT6-207ENST00000603641 TRIM41Q8WV44 630 aa36.03■■■■□ 3.36
GALNT6-207ENST00000603641 WRNQ14191 1432 aaPredicted RBP eCLIP35.93■■■■□ 3.34
GALNT6-207ENST00000603641 FANCD2Q9BXW9 1451 aa35.9■■■■□ 3.34
GALNT6-207ENST00000603641 PDS5BQ9NTI5 1447 aa35.82■■■■□ 3.33
GALNT6-207ENST00000603641 SYNJ1O43426 1573 aa35.8■■■■□ 3.32
GALNT6-207ENST00000603641 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
GALNT6-207ENST00000603641 KIF21AQ7Z4S6 1674 aa35.72■■■■□ 3.31
GALNT6-207ENST00000603641 TOP2BQ02880 1626 aa35.7■■■■□ 3.31
GALNT6-207ENST00000603641 CUX1P39880 1505 aa35.67■■■■□ 3.3
GALNT6-207ENST00000603641 BIVM-ERCC5R4GMW8 1640 aa35.67■■■■□ 3.3
GALNT6-207ENST00000603641 DNMBPQ6XZF7 1577 aa35.52■■■■□ 3.28
GALNT6-207ENST00000603641 ERCC6Q03468 1493 aa35.49■■■■□ 3.27
GALNT6-207ENST00000603641 URB2Q14146 1524 aaKnown RBP35.46■■■■□ 3.27
GALNT6-207ENST00000603641 TOPBP1Q92547 1522 aa35.46■■■■□ 3.27
GALNT6-207ENST00000603641 MRC2Q9UBG0 1479 aa35.39■■■■□ 3.26
GALNT6-207ENST00000603641 FGD5Q6ZNL6 1462 aa35.37■■■■□ 3.25
GALNT6-207ENST00000603641 FAM9AQ8IZU1 332 aaPredicted RBP35.35■■■■□ 3.25
GALNT6-207ENST00000603641 SOGA1O94964 1423 aa35.32■■■■□ 3.24
GALNT6-207ENST00000603641 POLA1P09884 1462 aaPredicted RBP35.26■■■■□ 3.23
GALNT6-207ENST00000603641 WDR62O43379 1518 aa35.22■■■■□ 3.23
GALNT6-207ENST00000603641 THOC2Q8NI27 1593 aaKnown RBP35.21■■■■□ 3.23
GALNT6-207ENST00000603641 RUSC2Q8N2Y8 1516 aa35.2■■■■□ 3.23
GALNT6-207ENST00000603641 EEA1Q15075 1411 aa35.19■■■■□ 3.22
GALNT6-207ENST00000603641 RAD54L2Q9Y4B4 1467 aa35.13■■■■□ 3.21
GALNT6-207ENST00000603641 KIF27Q86VH2 1401 aa35.06■■■■□ 3.2
GALNT6-207ENST00000603641 CUX2O14529 1486 aa35.06■■■■□ 3.2
GALNT6-207ENST00000603641 ABCA10Q8WWZ4 1543 aa35.04■■■■□ 3.2
GALNT6-207ENST00000603641 CSRNP3Q8WYN3 585 aa35.01■■■■□ 3.2
GALNT6-207ENST00000603641 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
GALNT6-207ENST00000603641 LOC105371045A0A1W2PR82 267 aa34.97■■■■□ 3.19
GALNT6-207ENST00000603641 TARBP1Q13395 1621 aaKnown RBP34.96■■■■□ 3.19
GALNT6-207ENST00000603641 IFT140Q96RY7 1462 aa34.89■■■■□ 3.18
GALNT6-207ENST00000603641 EHMT2Q96KQ7 1210 aa34.88■■■■□ 3.17
GALNT6-207ENST00000603641 TDRD9Q8NDG6 1382 aaKnown RBP34.82■■■■□ 3.16
GALNT6-207ENST00000603641 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
GALNT6-207ENST00000603641 KIF21BO75037 1637 aa34.78■■■■□ 3.16
GALNT6-207ENST00000603641 GAPVD1Q14C86 1478 aa34.75■■■■□ 3.15
GALNT6-207ENST00000603641 IGF1RP08069 1367 aa34.74■■■■□ 3.15
GALNT6-207ENST00000603641 GOLGA3Q08378 1498 aa34.7■■■■□ 3.15
GALNT6-207ENST00000603641 ZNF608Q9ULD9 1512 aaPredicted RBP34.69■■■■□ 3.14
GALNT6-207ENST00000603641 PRXQ9BXM0 1461 aa34.69■■■■□ 3.14
GALNT6-207ENST00000603641 AQRO60306 1485 aaKnown RBP eCLIP34.67■■■■□ 3.14
GALNT6-207ENST00000603641 ERICH3Q5RHP9 1530 aa34.64■■■■□ 3.14
GALNT6-207ENST00000603641 RAPGEF2Q9Y4G8 1499 aa34.64■■■■□ 3.14
GALNT6-207ENST00000603641 PBRM1Q86U86 1689 aa34.64■■■■□ 3.14
GALNT6-207ENST00000603641 EIF4G3O43432 1585 aaKnown RBP34.62■■■■□ 3.13
GALNT6-207ENST00000603641 CUL7Q14999 1698 aa34.6■■■■□ 3.13
GALNT6-207ENST00000603641 CARMIL1Q5VZK9 1371 aa34.59■■■■□ 3.13
GALNT6-207ENST00000603641 UBTFP17480 764 aaKnown RBP34.58■■■■□ 3.13
GALNT6-207ENST00000603641 GRIN2BQ13224 1484 aa34.54■■■■□ 3.12
GALNT6-207ENST00000603641 TNIKQ9UKE5 1360 aa34.47■■■■□ 3.11
GALNT6-207ENST00000603641 ADAMTS12P58397 1594 aa34.39■■■■□ 3.1
GALNT6-207ENST00000603641 SNAPC4Q5SXM2 1469 aa34.37■■■■□ 3.09
GALNT6-207ENST00000603641 FHAD1B1AJZ9 1412 aa34.36■■■■□ 3.09
GALNT6-207ENST00000603641 MAGI1Q96QZ7 1491 aaPredicted RBP34.31■■■■□ 3.08
GALNT6-207ENST00000603641 CEP162Q5TB80 1403 aa34.29■■■■□ 3.08
GALNT6-207ENST00000603641 CTTNBP2Q8WZ74 1663 aa34.18■■■■□ 3.06
GALNT6-207ENST00000603641 SYNJ2O15056 1496 aa34.17■■■■□ 3.06
GALNT6-207ENST00000603641 RANGAP1P46060 587 aaPredicted RBP34.15■■■■□ 3.06
GALNT6-207ENST00000603641 CLIP1P30622 1438 aa34.13■■■■□ 3.05
GALNT6-207ENST00000603641 CHMP7Q8WUX9 453 aaPredicted RBP34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms