RNA–Protein interactions for RNA: ENST00000603631.1

FOCAD-207, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-207ENST00000603631 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
FOCAD-207ENST00000603631 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
FOCAD-207ENST00000603631 ABCC9O60706 1549 aa19.72■□□□□ 0.75
FOCAD-207ENST00000603631 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.6
FOCAD-207ENST00000603631 NACADO15069 1562 aa18.72■□□□□ 0.59
FOCAD-207ENST00000603631 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
FOCAD-207ENST00000603631 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.55
FOCAD-207ENST00000603631 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
FOCAD-207ENST00000603631 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
FOCAD-207ENST00000603631 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
FOCAD-207ENST00000603631 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
FOCAD-207ENST00000603631 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
FOCAD-207ENST00000603631 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
FOCAD-207ENST00000603631 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
FOCAD-207ENST00000603631 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
FOCAD-207ENST00000603631 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
FOCAD-207ENST00000603631 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
FOCAD-207ENST00000603631 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
FOCAD-207ENST00000603631 SMARCA4P51532 1647 aa17.33■□□□□ 0.37
FOCAD-207ENST00000603631 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
FOCAD-207ENST00000603631 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.36
FOCAD-207ENST00000603631 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
FOCAD-207ENST00000603631 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
FOCAD-207ENST00000603631 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
FOCAD-207ENST00000603631 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
FOCAD-207ENST00000603631 PEG3Q9GZU2 1588 aa17.13■□□□□ 0.33
FOCAD-207ENST00000603631 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
FOCAD-207ENST00000603631 NESP48681 1621 aa17.01■□□□□ 0.31
FOCAD-207ENST00000603631 WIZO95785 1651 aa17.01■□□□□ 0.31
FOCAD-207ENST00000603631 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
FOCAD-207ENST00000603631 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
FOCAD-207ENST00000603631 CUX2O14529 1486 aa16.86■□□□□ 0.29
FOCAD-207ENST00000603631 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
FOCAD-207ENST00000603631 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
FOCAD-207ENST00000603631 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
FOCAD-207ENST00000603631 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
FOCAD-207ENST00000603631 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
FOCAD-207ENST00000603631 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
FOCAD-207ENST00000603631 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
FOCAD-207ENST00000603631 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
FOCAD-207ENST00000603631 CFTRP13569 1480 aa16.61■□□□□ 0.25
FOCAD-207ENST00000603631 FANCD2Q9BXW9 1451 aa16.6■□□□□ 0.25
FOCAD-207ENST00000603631 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
FOCAD-207ENST00000603631 WDR62O43379 1518 aa16.59■□□□□ 0.25
FOCAD-207ENST00000603631 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
FOCAD-207ENST00000603631 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
FOCAD-207ENST00000603631 URB2Q14146 1524 aaKnown RBP16.47■□□□□ 0.23
FOCAD-207ENST00000603631 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
FOCAD-207ENST00000603631 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.2
FOCAD-207ENST00000603631 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
FOCAD-207ENST00000603631 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
FOCAD-207ENST00000603631 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
FOCAD-207ENST00000603631 ABCC8Q09428 1581 aa16.23■□□□□ 0.19
FOCAD-207ENST00000603631 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
FOCAD-207ENST00000603631 TARBP1Q13395 1621 aaKnown RBP16.17■□□□□ 0.18
FOCAD-207ENST00000603631 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
FOCAD-207ENST00000603631 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
FOCAD-207ENST00000603631 CUX1P39880 1505 aa16.12■□□□□ 0.17
FOCAD-207ENST00000603631 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
FOCAD-207ENST00000603631 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.17
FOCAD-207ENST00000603631 FGD5Q6ZNL6 1462 aa16.09■□□□□ 0.17
FOCAD-207ENST00000603631 SOGA1O94964 1423 aa16.06■□□□□ 0.16
FOCAD-207ENST00000603631 CHD1O14646 1710 aa16.05■□□□□ 0.16
FOCAD-207ENST00000603631 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
FOCAD-207ENST00000603631 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
FOCAD-207ENST00000603631 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
FOCAD-207ENST00000603631 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
FOCAD-207ENST00000603631 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
FOCAD-207ENST00000603631 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
FOCAD-207ENST00000603631 FBLN2P98095 1184 aa15.94■□□□□ 0.14
FOCAD-207ENST00000603631 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
FOCAD-207ENST00000603631 PBRM1Q86U86 1689 aa15.94■□□□□ 0.14
FOCAD-207ENST00000603631 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
FOCAD-207ENST00000603631 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
FOCAD-207ENST00000603631 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
FOCAD-207ENST00000603631 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
FOCAD-207ENST00000603631 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
FOCAD-207ENST00000603631 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
FOCAD-207ENST00000603631 ABCA5Q8WWZ7 1642 aa15.89■□□□□ 0.13
FOCAD-207ENST00000603631 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
FOCAD-207ENST00000603631 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
FOCAD-207ENST00000603631 MAGI1Q96QZ7 1491 aaPredicted RBP15.87■□□□□ 0.13
FOCAD-207ENST00000603631 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
FOCAD-207ENST00000603631 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
FOCAD-207ENST00000603631 CLASP1Q7Z460 1538 aa15.82■□□□□ 0.12
FOCAD-207ENST00000603631 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
FOCAD-207ENST00000603631 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
FOCAD-207ENST00000603631 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
FOCAD-207ENST00000603631 GRIN2AQ12879 1464 aa15.71■□□□□ 0.11
FOCAD-207ENST00000603631 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
FOCAD-207ENST00000603631 CEP170Q5SW79 1584 aa15.68■□□□□ 0.1
FOCAD-207ENST00000603631 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
FOCAD-207ENST00000603631 NUP160Q12769 1436 aa15.64■□□□□ 0.09
FOCAD-207ENST00000603631 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
FOCAD-207ENST00000603631 SHROOM2Q13796 1616 aa15.59■□□□□ 0.09
FOCAD-207ENST00000603631 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
FOCAD-207ENST00000603631 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
FOCAD-207ENST00000603631 IGF1RP08069 1367 aa15.53■□□□□ 0.08
FOCAD-207ENST00000603631 CUL7Q14999 1698 aa15.53■□□□□ 0.08
FOCAD-207ENST00000603631 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms