RNA–Protein interactions for RNA: ENST00000603252.1

ERVW-1-203, Transcript of endogenous retrovirus group W member 1, envelope, humanhuman

TSL 1 (best)

Gene ERVW-1, Length 1,320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVW-1-203ENST00000603252 NISCHQ9Y2I1 1504 aa24.79■■□□□ 1.56
ERVW-1-203ENST00000603252 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
ERVW-1-203ENST00000603252 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
ERVW-1-203ENST00000603252 ABCC9O60706 1549 aa22.48■■□□□ 1.19
ERVW-1-203ENST00000603252 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
ERVW-1-203ENST00000603252 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
ERVW-1-203ENST00000603252 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
ERVW-1-203ENST00000603252 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
ERVW-1-203ENST00000603252 NACADO15069 1562 aa21.06■□□□□ 0.96
ERVW-1-203ENST00000603252 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
ERVW-1-203ENST00000603252 UNC13AQ9UPW8 1703 aa20.77■□□□□ 0.92
ERVW-1-203ENST00000603252 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
ERVW-1-203ENST00000603252 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
ERVW-1-203ENST00000603252 ZCCHC6Q5VYS8 1495 aaKnown RBP20.48■□□□□ 0.87
ERVW-1-203ENST00000603252 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
ERVW-1-203ENST00000603252 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
ERVW-1-203ENST00000603252 SHROOM4Q9ULL8 1493 aa20.26■□□□□ 0.83
ERVW-1-203ENST00000603252 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
ERVW-1-203ENST00000603252 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
ERVW-1-203ENST00000603252 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
ERVW-1-203ENST00000603252 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
ERVW-1-203ENST00000603252 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
ERVW-1-203ENST00000603252 DNAJC5Q9H3Z4 198 aa19.64■□□□□ 0.73
ERVW-1-203ENST00000603252 NCAPD3P42695 1498 aa19.51■□□□□ 0.71
ERVW-1-203ENST00000603252 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
ERVW-1-203ENST00000603252 CUX2O14529 1486 aa19.34■□□□□ 0.69
ERVW-1-203ENST00000603252 ERCC6Q03468 1493 aa19.33■□□□□ 0.69
ERVW-1-203ENST00000603252 SMARCA4P51532 1647 aa19.33■□□□□ 0.68
ERVW-1-203ENST00000603252 NESP48681 1621 aa19.31■□□□□ 0.68
ERVW-1-203ENST00000603252 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
ERVW-1-203ENST00000603252 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
ERVW-1-203ENST00000603252 BAZ1BQ9UIG0 1483 aaKnown RBP19.19■□□□□ 0.66
ERVW-1-203ENST00000603252 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
ERVW-1-203ENST00000603252 MROH2BQ7Z745 1585 aa19.14■□□□□ 0.65
ERVW-1-203ENST00000603252 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
ERVW-1-203ENST00000603252 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
ERVW-1-203ENST00000603252 LAMC3Q9Y6N6 1575 aa19.01■□□□□ 0.63
ERVW-1-203ENST00000603252 KIF21AQ7Z4S6 1674 aa18.96■□□□□ 0.63
ERVW-1-203ENST00000603252 PDS5BQ9NTI5 1447 aa18.94■□□□□ 0.62
ERVW-1-203ENST00000603252 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
ERVW-1-203ENST00000603252 WIZO95785 1651 aa18.87■□□□□ 0.61
ERVW-1-203ENST00000603252 MRC2Q9UBG0 1479 aa18.79■□□□□ 0.6
ERVW-1-203ENST00000603252 WDR62O43379 1518 aa18.74■□□□□ 0.59
ERVW-1-203ENST00000603252 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
ERVW-1-203ENST00000603252 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
ERVW-1-203ENST00000603252 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
ERVW-1-203ENST00000603252 FOXD1Q16676 465 aa18.67■□□□□ 0.58
ERVW-1-203ENST00000603252 CEP164Q9UPV0 1460 aa18.67■□□□□ 0.58
ERVW-1-203ENST00000603252 CFTRP13569 1480 aa18.66■□□□□ 0.58
ERVW-1-203ENST00000603252 TOP2AP11388 1531 aaKnown RBP18.57■□□□□ 0.56
ERVW-1-203ENST00000603252 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
ERVW-1-203ENST00000603252 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
ERVW-1-203ENST00000603252 CCDC88BA6NC98 1476 aa18.45■□□□□ 0.54
ERVW-1-203ENST00000603252 ZNF608Q9ULD9 1512 aaPredicted RBP18.39■□□□□ 0.53
ERVW-1-203ENST00000603252 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
ERVW-1-203ENST00000603252 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
ERVW-1-203ENST00000603252 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
ERVW-1-203ENST00000603252 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
ERVW-1-203ENST00000603252 RIMBP3CA6NJZ7 1639 aa18.25■□□□□ 0.51
ERVW-1-203ENST00000603252 RIMBP3BA6NNM3 1639 aa18.25■□□□□ 0.51
ERVW-1-203ENST00000603252 RIMBP3Q9UFD9 1639 aa18.25■□□□□ 0.51
ERVW-1-203ENST00000603252 AQRO60306 1485 aaKnown RBP eCLIP18.22■□□□□ 0.51
ERVW-1-203ENST00000603252 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
ERVW-1-203ENST00000603252 DNMBPQ6XZF7 1577 aa18.19■□□□□ 0.5
ERVW-1-203ENST00000603252 ARHGEF11O15085 1522 aa18.18■□□□□ 0.5
ERVW-1-203ENST00000603252 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
ERVW-1-203ENST00000603252 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
ERVW-1-203ENST00000603252 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
ERVW-1-203ENST00000603252 POLA1P09884 1462 aaPredicted RBP18.12■□□□□ 0.49
ERVW-1-203ENST00000603252 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
ERVW-1-203ENST00000603252 FBLN2P98095 1184 aa18.11■□□□□ 0.49
ERVW-1-203ENST00000603252 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
ERVW-1-203ENST00000603252 CHD1O14646 1710 aa18.06■□□□□ 0.48
ERVW-1-203ENST00000603252 SOGA1O94964 1423 aa18.05■□□□□ 0.48
ERVW-1-203ENST00000603252 ARAP1Q96P48 1450 aa18.02■□□□□ 0.47
ERVW-1-203ENST00000603252 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
ERVW-1-203ENST00000603252 CUX1P39880 1505 aa17.96■□□□□ 0.47
ERVW-1-203ENST00000603252 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
ERVW-1-203ENST00000603252 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
ERVW-1-203ENST00000603252 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
ERVW-1-203ENST00000603252 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
ERVW-1-203ENST00000603252 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
ERVW-1-203ENST00000603252 MAGI1Q96QZ7 1491 aaPredicted RBP17.85■□□□□ 0.45
ERVW-1-203ENST00000603252 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
ERVW-1-203ENST00000603252 SYNJ2O15056 1496 aa17.83■□□□□ 0.44
ERVW-1-203ENST00000603252 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
ERVW-1-203ENST00000603252 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
ERVW-1-203ENST00000603252 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
ERVW-1-203ENST00000603252 ABCA10Q8WWZ4 1543 aa17.76■□□□□ 0.43
ERVW-1-203ENST00000603252 PBRM1Q86U86 1689 aa17.73■□□□□ 0.43
ERVW-1-203ENST00000603252 ABCA5Q8WWZ7 1642 aa17.71■□□□□ 0.43
ERVW-1-203ENST00000603252 ERCC6L2Q5T890 1561 aa17.68■□□□□ 0.42
ERVW-1-203ENST00000603252 ADRA2BP18089 450 aa17.67■□□□□ 0.42
ERVW-1-203ENST00000603252 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
ERVW-1-203ENST00000603252 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
ERVW-1-203ENST00000603252 GRIN2AQ12879 1464 aa17.64■□□□□ 0.41
ERVW-1-203ENST00000603252 NUP160Q12769 1436 aa17.61■□□□□ 0.41
ERVW-1-203ENST00000603252 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
ERVW-1-203ENST00000603252 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
ERVW-1-203ENST00000603252 TOP2BQ02880 1626 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms