RNA–Protein interactions for RNA: ENST00000603004.1

SMIM12P1-201, Transcript of small integral membrane protein 12 pseudogene 1, humanhuman

BASIC

Gene SMIM12P1, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12P1-201ENST00000603004 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
SMIM12P1-201ENST00000603004 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
SMIM12P1-201ENST00000603004 ABCC9O60706 1549 aa14.32□□□□□ -0.12
SMIM12P1-201ENST00000603004 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
SMIM12P1-201ENST00000603004 NACADO15069 1562 aa13.58□□□□□ -0.24
SMIM12P1-201ENST00000603004 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
SMIM12P1-201ENST00000603004 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
SMIM12P1-201ENST00000603004 DCAF8L2P0C7V8 631 aa13.41□□□□□ -0.26
SMIM12P1-201ENST00000603004 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
SMIM12P1-201ENST00000603004 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMIM12P1-201ENST00000603004 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
SMIM12P1-201ENST00000603004 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
SMIM12P1-201ENST00000603004 ZCCHC6Q5VYS8 1495 aaKnown RBP13.22□□□□□ -0.29
SMIM12P1-201ENST00000603004 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
SMIM12P1-201ENST00000603004 SCRIBQ14160 1630 aa13.02□□□□□ -0.32
SMIM12P1-201ENST00000603004 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
SMIM12P1-201ENST00000603004 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
SMIM12P1-201ENST00000603004 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
SMIM12P1-201ENST00000603004 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
SMIM12P1-201ENST00000603004 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.41
SMIM12P1-201ENST00000603004 SMARCA4P51532 1647 aa12.45□□□□□ -0.42
SMIM12P1-201ENST00000603004 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
SMIM12P1-201ENST00000603004 HMGXB3Q12766 1538 aa12.44□□□□□ -0.42
SMIM12P1-201ENST00000603004 DNAJC5Q9H3Z4 198 aa12.42□□□□□ -0.42
SMIM12P1-201ENST00000603004 CUX2O14529 1486 aa12.41□□□□□ -0.42
SMIM12P1-201ENST00000603004 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
SMIM12P1-201ENST00000603004 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
SMIM12P1-201ENST00000603004 PEG3Q9GZU2 1588 aa12.36□□□□□ -0.43
SMIM12P1-201ENST00000603004 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
SMIM12P1-201ENST00000603004 NESP48681 1621 aa12.29□□□□□ -0.44
SMIM12P1-201ENST00000603004 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
SMIM12P1-201ENST00000603004 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
SMIM12P1-201ENST00000603004 THOC2Q8NI27 1593 aaKnown RBP12.21□□□□□ -0.46
SMIM12P1-201ENST00000603004 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
SMIM12P1-201ENST00000603004 KIF21AQ7Z4S6 1674 aa12.16□□□□□ -0.46
SMIM12P1-201ENST00000603004 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
SMIM12P1-201ENST00000603004 WIZO95785 1651 aa12.12□□□□□ -0.47
SMIM12P1-201ENST00000603004 MRC2Q9UBG0 1479 aa12.06□□□□□ -0.48
SMIM12P1-201ENST00000603004 WDR62O43379 1518 aa12.05□□□□□ -0.48
SMIM12P1-201ENST00000603004 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
SMIM12P1-201ENST00000603004 CEP164Q9UPV0 1460 aa12.01□□□□□ -0.49
SMIM12P1-201ENST00000603004 CFTRP13569 1480 aa12□□□□□ -0.49
SMIM12P1-201ENST00000603004 TOP2AP11388 1531 aaKnown RBP11.99□□□□□ -0.49
SMIM12P1-201ENST00000603004 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
SMIM12P1-201ENST00000603004 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
SMIM12P1-201ENST00000603004 URB2Q14146 1524 aaKnown RBP11.88□□□□□ -0.51
SMIM12P1-201ENST00000603004 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
SMIM12P1-201ENST00000603004 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
SMIM12P1-201ENST00000603004 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
SMIM12P1-201ENST00000603004 IFT140Q96RY7 1462 aa11.77□□□□□ -0.52
SMIM12P1-201ENST00000603004 ABCC8Q09428 1581 aa11.77□□□□□ -0.53
SMIM12P1-201ENST00000603004 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
SMIM12P1-201ENST00000603004 DNMBPQ6XZF7 1577 aa11.72□□□□□ -0.53
SMIM12P1-201ENST00000603004 ZNF608Q9ULD9 1512 aaPredicted RBP11.72□□□□□ -0.53
SMIM12P1-201ENST00000603004 EIF4G3O43432 1585 aaKnown RBP11.68□□□□□ -0.54
SMIM12P1-201ENST00000603004 TARBP1Q13395 1621 aaKnown RBP11.67□□□□□ -0.54
SMIM12P1-201ENST00000603004 RIMBP3CA6NJZ7 1639 aa11.66□□□□□ -0.54
SMIM12P1-201ENST00000603004 RIMBP3BA6NNM3 1639 aa11.66□□□□□ -0.54
SMIM12P1-201ENST00000603004 RIMBP3Q9UFD9 1639 aa11.66□□□□□ -0.54
SMIM12P1-201ENST00000603004 POLA1P09884 1462 aaPredicted RBP11.63□□□□□ -0.55
SMIM12P1-201ENST00000603004 ARHGEF11O15085 1522 aa11.62□□□□□ -0.55
SMIM12P1-201ENST00000603004 AQRO60306 1485 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMIM12P1-201ENST00000603004 CHD1O14646 1710 aa11.6□□□□□ -0.55
SMIM12P1-201ENST00000603004 WDR97A6NE52 1622 aa11.59□□□□□ -0.55
SMIM12P1-201ENST00000603004 SOGA1O94964 1423 aa11.58□□□□□ -0.56
SMIM12P1-201ENST00000603004 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
SMIM12P1-201ENST00000603004 FGD5Q6ZNL6 1462 aa11.55□□□□□ -0.56
SMIM12P1-201ENST00000603004 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
SMIM12P1-201ENST00000603004 FBLN2P98095 1184 aa11.53□□□□□ -0.56
SMIM12P1-201ENST00000603004 CUX1P39880 1505 aa11.53□□□□□ -0.56
SMIM12P1-201ENST00000603004 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
SMIM12P1-201ENST00000603004 CYB5RLQ6IPT4 315 aa11.51□□□□□ -0.57
SMIM12P1-201ENST00000603004 SNAPC4Q5SXM2 1469 aa11.51□□□□□ -0.57
SMIM12P1-201ENST00000603004 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
SMIM12P1-201ENST00000603004 GRIN2BQ13224 1484 aa11.49□□□□□ -0.57
SMIM12P1-201ENST00000603004 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
SMIM12P1-201ENST00000603004 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
SMIM12P1-201ENST00000603004 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
SMIM12P1-201ENST00000603004 SYNJ2O15056 1496 aa11.46□□□□□ -0.57
SMIM12P1-201ENST00000603004 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
SMIM12P1-201ENST00000603004 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
SMIM12P1-201ENST00000603004 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
SMIM12P1-201ENST00000603004 ABCA5Q8WWZ7 1642 aa11.42□□□□□ -0.58
SMIM12P1-201ENST00000603004 SUPT5HO00267 1087 aaKnown RBP11.4□□□□□ -0.58
SMIM12P1-201ENST00000603004 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
SMIM12P1-201ENST00000603004 WRNQ14191 1432 aaPredicted RBP eCLIP11.38□□□□□ -0.59
SMIM12P1-201ENST00000603004 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
SMIM12P1-201ENST00000603004 BIVM-ERCC5R4GMW8 1640 aa11.36□□□□□ -0.59
SMIM12P1-201ENST00000603004 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
SMIM12P1-201ENST00000603004 ADAMTS12P58397 1594 aa11.33□□□□□ -0.6
SMIM12P1-201ENST00000603004 NUP160Q12769 1436 aa11.31□□□□□ -0.6
SMIM12P1-201ENST00000603004 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
SMIM12P1-201ENST00000603004 FHAD1B1AJZ9 1412 aa11.3□□□□□ -0.6
SMIM12P1-201ENST00000603004 CEP170Q5SW79 1584 aa11.29□□□□□ -0.6
SMIM12P1-201ENST00000603004 SHROOM2Q13796 1616 aa11.27□□□□□ -0.6
SMIM12P1-201ENST00000603004 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
SMIM12P1-201ENST00000603004 PRG4Q92954 1404 aaPredicted RBP11.18□□□□□ -0.62
SMIM12P1-201ENST00000603004 JPH4Q96JJ6 628 aa11.18□□□□□ -0.62
SMIM12P1-201ENST00000603004 RUSC2Q8N2Y8 1516 aa11.18□□□□□ -0.62
SMIM12P1-201ENST00000603004 CUL7Q14999 1698 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms