RNA–Protein interactions for RNA: ENST00000602887.1

RANBP10-208, Transcript of RAN binding protein 10, human

TSL 3

Gene RANBP10, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP10-208	ENST00000602887	NISCH	Q9Y2I1	1504 aa		63.53	■■■■■ 7.76
RANBP10-208	ENST00000602887	CCDC180	Q9P1Z9	1646 aa		56.73	■■■■■ 6.67
RANBP10-208	ENST00000602887	ABCC9	O60706	1549 aa		55.94	■■■■■ 6.55
RANBP10-208	ENST00000602887	RB1CC1	Q8TDY2	1594 aa		53.65	■■■■■ 6.18
RANBP10-208	ENST00000602887	NACAD	O15069	1562 aa		53.49	■■■■■ 6.15
RANBP10-208	ENST00000602887	DCAF8L2	P0C7V8	631 aa		53.25	■■■■■ 6.11
RANBP10-208	ENST00000602887	MYO15B	Q96JP2	1530 aa		53.04	■■■■■ 6.08
RANBP10-208	ENST00000602887	ZCCHC6	Q5VYS8	1495 aa	Known RBP	52.82	■■■■■ 6.05
RANBP10-208	ENST00000602887	DCAF1	Q9Y4B6	1507 aa		52.6	■■■■■ 6.01
RANBP10-208	ENST00000602887	UNC13A	Q9UPW8	1703 aa		52.34	■■■■■ 5.97
RANBP10-208	ENST00000602887	PABPN1	Q86U42	306 aa	Known RBP eCLIP	52.18	■■■■■ 5.94
RANBP10-208	ENST00000602887	BICRA	Q9NZM4	1560 aa		51.99	■■■■■ 5.91
RANBP10-208	ENST00000602887	DNAJC5B	Q9UF47	199 aa		51.8	■■■■■ 5.88
RANBP10-208	ENST00000602887	SCRIB	Q14160	1630 aa		51.64	■■■■■ 5.86
RANBP10-208	ENST00000602887	SHROOM4	Q9ULL8	1493 aa		51.53	■■■■■ 5.84
RANBP10-208	ENST00000602887	EIF4G1	Q04637	1599 aa	Known RBP	50.68	■■■■■ 5.7
RANBP10-208	ENST00000602887	CC2D2A	Q9P2K1	1620 aa		50.58	■■■■■ 5.69
RANBP10-208	ENST00000602887	CECR2	Q9BXF3	1484 aa		50.36	■■■■■ 5.65
RANBP10-208	ENST00000602887	SMARCA4	P51532	1647 aa		49.38	■■■■■ 5.5
RANBP10-208	ENST00000602887	NCAPD3	P42695	1498 aa		49.36	■■■■■ 5.49
RANBP10-208	ENST00000602887	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	49.29	■■■■■ 5.48
RANBP10-208	ENST00000602887	ATAD2B	Q9ULI0	1458 aa		49.27	■■■■■ 5.48
RANBP10-208	ENST00000602887	SMARCA2	P51531	1590 aa		49.22	■■■■■ 5.47
RANBP10-208	ENST00000602887	HMGXB3	Q12766	1538 aa		49.05	■■■■■ 5.44
RANBP10-208	ENST00000602887	PEG3	Q9GZU2	1588 aa		48.96	■■■■■ 5.43
RANBP10-208	ENST00000602887	MROH2B	Q7Z745	1585 aa		48.91	■■■■■ 5.42
RANBP10-208	ENST00000602887	BAZ1B	Q9UIG0	1483 aa	Known RBP	48.84	■■■■■ 5.41
RANBP10-208	ENST00000602887	WIZ	O95785	1651 aa		48.34	■■■■■ 5.33
RANBP10-208	ENST00000602887	ERCC6	Q03468	1493 aa		48.3	■■■■■ 5.32
RANBP10-208	ENST00000602887	NES	P48681	1621 aa		48.23	■■■■■ 5.31
RANBP10-208	ENST00000602887	RSF1	Q96T23	1441 aa	Predicted RBP	48.2	■■■■■ 5.31
RANBP10-208	ENST00000602887	LAMC3	Q9Y6N6	1575 aa		48.12	■■■■■ 5.29
RANBP10-208	ENST00000602887	CUX2	O14529	1486 aa		48.02	■■■■■ 5.28
RANBP10-208	ENST00000602887	CADPS	Q9ULU8	1353 aa		47.88	■■■■■ 5.26
RANBP10-208	ENST00000602887	TOP2A	P11388	1531 aa	Known RBP	47.86	■■■■■ 5.25
RANBP10-208	ENST00000602887	PDS5B	Q9NTI5	1447 aa		47.84	■■■■■ 5.25
RANBP10-208	ENST00000602887	KIF21A	Q7Z4S6	1674 aa		47.64	■■■■■ 5.22
RANBP10-208	ENST00000602887	THOC2	Q8NI27	1593 aa	Known RBP	47.64	■■■■■ 5.22
RANBP10-208	ENST00000602887	CFTR	P13569	1480 aa		47.48	■■■■■ 5.19
RANBP10-208	ENST00000602887	MRC2	Q9UBG0	1479 aa		47.35	■■■■■ 5.17
RANBP10-208	ENST00000602887	FANCD2	Q9BXW9	1451 aa		47.31	■■■■■ 5.16
RANBP10-208	ENST00000602887	CEP164	Q9UPV0	1460 aa		47.31	■■■■■ 5.16
RANBP10-208	ENST00000602887	CCDC88B	A6NC98	1476 aa		47.27	■■■■■ 5.16
RANBP10-208	ENST00000602887	WDR62	O43379	1518 aa		47.2	■■■■■ 5.15
RANBP10-208	ENST00000602887	DNAJC5	Q9H3Z4	198 aa		47.14	■■■■■ 5.14
RANBP10-208	ENST00000602887	PRDM2	Q13029	1718 aa		47.05	■■■■■ 5.12
RANBP10-208	ENST00000602887	URB2	Q14146	1524 aa	Known RBP	46.84	■■■■■ 5.09
RANBP10-208	ENST00000602887	SUPT5H	O00267	1087 aa	Known RBP	46.55	■■■■■ 5.04
RANBP10-208	ENST00000602887	ABCC8	Q09428	1581 aa		46.53	■■■■■ 5.04
RANBP10-208	ENST00000602887	TOPBP1	Q92547	1522 aa		46.49	■■■■■ 5.03
RANBP10-208	ENST00000602887	DNMBP	Q6XZF7	1577 aa		46.39	■■■■■ 5.02
RANBP10-208	ENST00000602887	IFT140	Q96RY7	1462 aa		46.36	■■■■■ 5.01
RANBP10-208	ENST00000602887	ZNF608	Q9ULD9	1512 aa	Predicted RBP	46.13	■■■■■ 4.97
RANBP10-208	ENST00000602887	POLA1	P09884	1462 aa	Predicted RBP	46.06	■■■■■ 4.96
RANBP10-208	ENST00000602887	TARBP1	Q13395	1621 aa	Known RBP	46	■■■■■ 4.95
RANBP10-208	ENST00000602887	OSCAR	Q8IYS5	282 aa		45.93	■■■■■ 4.94
RANBP10-208	ENST00000602887	CUX1	P39880	1505 aa		45.93	■■■■■ 4.94
RANBP10-208	ENST00000602887	EIF4G3	O43432	1585 aa	Known RBP	45.92	■■■■■ 4.94
RANBP10-208	ENST00000602887	SOGA1	O94964	1423 aa		45.88	■■■■■ 4.94
RANBP10-208	ENST00000602887	FGD5	Q6ZNL6	1462 aa		45.87	■■■■■ 4.93
RANBP10-208	ENST00000602887	RAD54L2	Q9Y4B4	1467 aa		45.83	■■■■■ 4.93
RANBP10-208	ENST00000602887	AQR	O60306	1485 aa	Known RBP eCLIP	45.81	■■■■■ 4.92	1e-8	■■■■□ 21.3
RANBP10-208	ENST00000602887	WDR97	A6NE52	1622 aa		45.69	■■■■■ 4.9
RANBP10-208	ENST00000602887	TDRD9	Q8NDG6	1382 aa	Known RBP	45.66	■■■■■ 4.9
RANBP10-208	ENST00000602887	WRN	Q14191	1432 aa	Predicted RBP eCLIP	45.48	■■■■■ 4.87
RANBP10-208	ENST00000602887	ABCA10	Q8WWZ4	1543 aa		45.43	■■■■■ 4.86
RANBP10-208	ENST00000602887	CHD1	O14646	1710 aa		45.43	■■■■■ 4.86
RANBP10-208	ENST00000602887	GRIN2B	Q13224	1484 aa		45.42	■■■■■ 4.86
RANBP10-208	ENST00000602887	TOP2B	Q02880	1626 aa		45.41	■■■■■ 4.86
RANBP10-208	ENST00000602887	BIVM-ERCC5	R4GMW8	1640 aa		45.41	■■■■■ 4.86
RANBP10-208	ENST00000602887	SNAPC4	Q5SXM2	1469 aa		45.38	■■■■■ 4.86
RANBP10-208	ENST00000602887	FBLN2	P98095	1184 aa		45.37	■■■■■ 4.85
RANBP10-208	ENST00000602887	MAGI1	Q96QZ7	1491 aa	Predicted RBP	45.36	■■■■■ 4.85
RANBP10-208	ENST00000602887	GAPVD1	Q14C86	1478 aa		45.34	■■■■■ 4.85
RANBP10-208	ENST00000602887	SYNJ1	O43426	1573 aa		45.33	■■■■■ 4.85
RANBP10-208	ENST00000602887	TRIM41	Q8WV44	630 aa		45.29	■■■■■ 4.84
RANBP10-208	ENST00000602887	ABCA5	Q8WWZ7	1642 aa		45.26	■■■■■ 4.84
RANBP10-208	ENST00000602887	PBRM1	Q86U86	1689 aa		45.22	■■■■■ 4.83
RANBP10-208	ENST00000602887	CHMP7	Q8WUX9	453 aa	Predicted RBP	45.21	■■■■■ 4.83
RANBP10-208	ENST00000602887	SYNJ2	O15056	1496 aa		45.18	■■■■■ 4.82
RANBP10-208	ENST00000602887	RIMBP3C	A6NJZ7	1639 aa		45.18	■■■■■ 4.82
RANBP10-208	ENST00000602887	RIMBP3B	A6NNM3	1639 aa		45.18	■■■■■ 4.82
RANBP10-208	ENST00000602887	RIMBP3	Q9UFD9	1639 aa		45.18	■■■■■ 4.82
RANBP10-208	ENST00000602887	ARHGEF11	O15085	1522 aa		45.15	■■■■■ 4.82
RANBP10-208	ENST00000602887	CLASP1	Q7Z460	1538 aa		44.97	■■■■■ 4.79
RANBP10-208	ENST00000602887	ERICH3	Q5RHP9	1530 aa		44.88	■■■■■ 4.78
RANBP10-208	ENST00000602887	ADAMTS12	P58397	1594 aa		44.86	■■■■■ 4.77
RANBP10-208	ENST00000602887	FHAD1	B1AJZ9	1412 aa		44.82	■■■■■ 4.77
RANBP10-208	ENST00000602887	GRIN2A	Q12879	1464 aa		44.81	■■■■■ 4.76
RANBP10-208	ENST00000602887	CYB5RL	Q6IPT4	315 aa		44.76	■■■■■ 4.76
RANBP10-208	ENST00000602887	ARAP1	Q96P48	1450 aa		44.74	■■■■■ 4.75
RANBP10-208	ENST00000602887	NUP160	Q12769	1436 aa		44.66	■■■■■ 4.74
RANBP10-208	ENST00000602887	KIF27	Q86VH2	1401 aa		44.59	■■■■■ 4.73
RANBP10-208	ENST00000602887	CEP170	Q5SW79	1584 aa		44.58	■■■■■ 4.73
RANBP10-208	ENST00000602887	IGF1R	P08069	1367 aa		44.45	■■■■■ 4.71
RANBP10-208	ENST00000602887	CUL7	Q14999	1698 aa		44.36	■■■■■ 4.69
RANBP10-208	ENST00000602887	SHROOM2	Q13796	1616 aa		44.35	■■■■■ 4.69
RANBP10-208	ENST00000602887	ERCC6L2	Q5T890	1561 aa		44.25	■■■■■ 4.67
RANBP10-208	ENST00000602887	RUSC2	Q8N2Y8	1516 aa		44.21	■■■■■ 4.67
RANBP10-208	ENST00000602887	JPH4	Q96JJ6	628 aa		44.2	■■■■■ 4.67

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms