RNA–Protein interactions for RNA: ENST00000602878.5

LINC00472-206, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 717 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-206ENST00000602878 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
LINC00472-206ENST00000602878 CCDC180Q9P1Z9 1646 aa25.58■■□□□ 1.69
LINC00472-206ENST00000602878 ABCC9O60706 1549 aa25.27■■□□□ 1.64
LINC00472-206ENST00000602878 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
LINC00472-206ENST00000602878 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
LINC00472-206ENST00000602878 NACADO15069 1562 aa24.1■■□□□ 1.45
LINC00472-206ENST00000602878 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
LINC00472-206ENST00000602878 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
LINC00472-206ENST00000602878 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
LINC00472-206ENST00000602878 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
LINC00472-206ENST00000602878 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
LINC00472-206ENST00000602878 BICRAQ9NZM4 1560 aa23.46■■□□□ 1.35
LINC00472-206ENST00000602878 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
LINC00472-206ENST00000602878 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
LINC00472-206ENST00000602878 SHROOM4Q9ULL8 1493 aa23.14■■□□□ 1.29
LINC00472-206ENST00000602878 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
LINC00472-206ENST00000602878 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
LINC00472-206ENST00000602878 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
LINC00472-206ENST00000602878 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
LINC00472-206ENST00000602878 NCAPD3P42695 1498 aa22.23■■□□□ 1.15
LINC00472-206ENST00000602878 BAZ1AQ9NRL2 1556 aaPredicted RBP22.23■■□□□ 1.15
LINC00472-206ENST00000602878 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
LINC00472-206ENST00000602878 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
LINC00472-206ENST00000602878 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
LINC00472-206ENST00000602878 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
LINC00472-206ENST00000602878 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
LINC00472-206ENST00000602878 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
LINC00472-206ENST00000602878 WIZO95785 1651 aa21.88■■□□□ 1.09
LINC00472-206ENST00000602878 NESP48681 1621 aa21.8■■□□□ 1.08
LINC00472-206ENST00000602878 ERCC6Q03468 1493 aa21.79■■□□□ 1.08
LINC00472-206ENST00000602878 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
LINC00472-206ENST00000602878 LAMC3Q9Y6N6 1575 aa21.69■■□□□ 1.06
LINC00472-206ENST00000602878 CUX2O14529 1486 aa21.6■■□□□ 1.05
LINC00472-206ENST00000602878 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
LINC00472-206ENST00000602878 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
LINC00472-206ENST00000602878 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
LINC00472-206ENST00000602878 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
LINC00472-206ENST00000602878 THOC2Q8NI27 1593 aaKnown RBP21.49■■□□□ 1.03
LINC00472-206ENST00000602878 CFTRP13569 1480 aa21.4■■□□□ 1.02
LINC00472-206ENST00000602878 CCDC88BA6NC98 1476 aa21.36■■□□□ 1.01
LINC00472-206ENST00000602878 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
LINC00472-206ENST00000602878 MRC2Q9UBG0 1479 aa21.34■■□□□ 1.01
LINC00472-206ENST00000602878 CEP164Q9UPV0 1460 aa21.33■■□□□ 1.01
LINC00472-206ENST00000602878 PRDM2Q13029 1718 aa21.27■■□□□ 1
LINC00472-206ENST00000602878 WDR62O43379 1518 aa21.27■■□□□ 1
LINC00472-206ENST00000602878 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
LINC00472-206ENST00000602878 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.97
LINC00472-206ENST00000602878 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
LINC00472-206ENST00000602878 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
LINC00472-206ENST00000602878 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
LINC00472-206ENST00000602878 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
LINC00472-206ENST00000602878 IFT140Q96RY7 1462 aa20.89■□□□□ 0.94
LINC00472-206ENST00000602878 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.93
LINC00472-206ENST00000602878 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
LINC00472-206ENST00000602878 TARBP1Q13395 1621 aaKnown RBP20.77■□□□□ 0.92
LINC00472-206ENST00000602878 CUX1P39880 1505 aa20.73■□□□□ 0.91
LINC00472-206ENST00000602878 EIF4G3O43432 1585 aaKnown RBP20.73■□□□□ 0.91
LINC00472-206ENST00000602878 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
LINC00472-206ENST00000602878 OSCARQ8IYS5 282 aa20.71■□□□□ 0.91
LINC00472-206ENST00000602878 SOGA1O94964 1423 aa20.7■□□□□ 0.9
LINC00472-206ENST00000602878 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
LINC00472-206ENST00000602878 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.9
LINC00472-206ENST00000602878 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
LINC00472-206ENST00000602878 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
LINC00472-206ENST00000602878 CHD1O14646 1710 aa20.55■□□□□ 0.88
LINC00472-206ENST00000602878 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
LINC00472-206ENST00000602878 FBLN2P98095 1184 aa20.52■□□□□ 0.88
LINC00472-206ENST00000602878 TOP2BQ02880 1626 aa20.51■□□□□ 0.87
LINC00472-206ENST00000602878 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
LINC00472-206ENST00000602878 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
LINC00472-206ENST00000602878 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
LINC00472-206ENST00000602878 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
LINC00472-206ENST00000602878 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
LINC00472-206ENST00000602878 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
LINC00472-206ENST00000602878 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
LINC00472-206ENST00000602878 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
LINC00472-206ENST00000602878 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
LINC00472-206ENST00000602878 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
LINC00472-206ENST00000602878 CHMP7Q8WUX9 453 aaPredicted RBP20.41■□□□□ 0.86
LINC00472-206ENST00000602878 RIMBP3CA6NJZ7 1639 aa20.4■□□□□ 0.86
LINC00472-206ENST00000602878 RIMBP3BA6NNM3 1639 aa20.4■□□□□ 0.86
LINC00472-206ENST00000602878 RIMBP3Q9UFD9 1639 aa20.4■□□□□ 0.86
LINC00472-206ENST00000602878 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
LINC00472-206ENST00000602878 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
LINC00472-206ENST00000602878 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.83
LINC00472-206ENST00000602878 ADAMTS12P58397 1594 aa20.24■□□□□ 0.83
LINC00472-206ENST00000602878 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
LINC00472-206ENST00000602878 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
LINC00472-206ENST00000602878 GRIN2AQ12879 1464 aa20.21■□□□□ 0.83
LINC00472-206ENST00000602878 FHAD1B1AJZ9 1412 aa20.2■□□□□ 0.82
LINC00472-206ENST00000602878 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
LINC00472-206ENST00000602878 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
LINC00472-206ENST00000602878 NUP160Q12769 1436 aa20.12■□□□□ 0.81
LINC00472-206ENST00000602878 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
LINC00472-206ENST00000602878 IGF1RP08069 1367 aa20.07■□□□□ 0.8
LINC00472-206ENST00000602878 CUL7Q14999 1698 aa20.02■□□□□ 0.8
LINC00472-206ENST00000602878 ERCC6L2Q5T890 1561 aa20.01■□□□□ 0.79
LINC00472-206ENST00000602878 SHROOM2Q13796 1616 aa20■□□□□ 0.79
LINC00472-206ENST00000602878 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.79
LINC00472-206ENST00000602878 JPH4Q96JJ6 628 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms