RNA–Protein interactions for RNA: ENST00000602832.1

OBSCN-212, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 2

Gene OBSCN, Length 372 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-212ENST00000602832 NISCHQ9Y2I1 1504 aa40.56■■■■■ 4.08
OBSCN-212ENST00000602832 ABCC9O60706 1549 aa36.9■■■■□ 3.5
OBSCN-212ENST00000602832 CCDC180Q9P1Z9 1646 aa36.54■■■■□ 3.44
OBSCN-212ENST00000602832 RB1CC1Q8TDY2 1594 aa34.93■■■■□ 3.18
OBSCN-212ENST00000602832 DNAJC5BQ9UF47 199 aa34.86■■■■□ 3.17
OBSCN-212ENST00000602832 NACADO15069 1562 aa34.59■■■■□ 3.13
OBSCN-212ENST00000602832 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
OBSCN-212ENST00000602832 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
OBSCN-212ENST00000602832 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
OBSCN-212ENST00000602832 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
OBSCN-212ENST00000602832 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
OBSCN-212ENST00000602832 ZCCHC6Q5VYS8 1495 aaKnown RBP33.55■■■□□ 2.96
OBSCN-212ENST00000602832 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
OBSCN-212ENST00000602832 SCRIBQ14160 1630 aa33.36■■■□□ 2.93
OBSCN-212ENST00000602832 SHROOM4Q9ULL8 1493 aa33.34■■■□□ 2.93
OBSCN-212ENST00000602832 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
OBSCN-212ENST00000602832 CECR2Q9BXF3 1484 aa33.24■■■□□ 2.91
OBSCN-212ENST00000602832 EIF4G1Q04637 1599 aaKnown RBP33.13■■■□□ 2.89
OBSCN-212ENST00000602832 DNAJC5Q9H3Z4 198 aa32.18■■■□□ 2.74
OBSCN-212ENST00000602832 NCAPD3P42695 1498 aa31.91■■■□□ 2.7
OBSCN-212ENST00000602832 ERCC6Q03468 1493 aa31.88■■■□□ 2.69
OBSCN-212ENST00000602832 CUX2O14529 1486 aa31.85■■■□□ 2.69
OBSCN-212ENST00000602832 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
OBSCN-212ENST00000602832 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
OBSCN-212ENST00000602832 SMARCA2P51531 1590 aa31.71■■■□□ 2.67
OBSCN-212ENST00000602832 HMGXB3Q12766 1538 aa31.68■■■□□ 2.66
OBSCN-212ENST00000602832 NESP48681 1621 aa31.62■■■□□ 2.65
OBSCN-212ENST00000602832 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
OBSCN-212ENST00000602832 BAZ1AQ9NRL2 1556 aaPredicted RBP31.5■■■□□ 2.63
OBSCN-212ENST00000602832 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
OBSCN-212ENST00000602832 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
OBSCN-212ENST00000602832 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
OBSCN-212ENST00000602832 LAMC3Q9Y6N6 1575 aa31.28■■■□□ 2.6
OBSCN-212ENST00000602832 KIF21AQ7Z4S6 1674 aa31.23■■■□□ 2.59
OBSCN-212ENST00000602832 PDS5BQ9NTI5 1447 aa31.1■■■□□ 2.57
OBSCN-212ENST00000602832 CADPSQ9ULU8 1353 aa30.95■■■□□ 2.55
OBSCN-212ENST00000602832 WIZO95785 1651 aa30.93■■■□□ 2.54
OBSCN-212ENST00000602832 MRC2Q9UBG0 1479 aa30.88■■■□□ 2.53
OBSCN-212ENST00000602832 WDR62O43379 1518 aa30.8■■■□□ 2.52
OBSCN-212ENST00000602832 TRIM41Q8WV44 630 aa30.76■■■□□ 2.51
OBSCN-212ENST00000602832 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.51
OBSCN-212ENST00000602832 FANCD2Q9BXW9 1451 aa30.64■■■□□ 2.5
OBSCN-212ENST00000602832 CFTRP13569 1480 aa30.53■■■□□ 2.48
OBSCN-212ENST00000602832 RSF1Q96T23 1441 aaPredicted RBP30.49■■■□□ 2.47
OBSCN-212ENST00000602832 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
OBSCN-212ENST00000602832 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
OBSCN-212ENST00000602832 OSCARQ8IYS5 282 aa30.36■■■□□ 2.45
OBSCN-212ENST00000602832 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
OBSCN-212ENST00000602832 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
OBSCN-212ENST00000602832 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
OBSCN-212ENST00000602832 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
OBSCN-212ENST00000602832 RIMBP3CA6NJZ7 1639 aa30.06■■■□□ 2.4
OBSCN-212ENST00000602832 RIMBP3BA6NNM3 1639 aa30.06■■■□□ 2.4
OBSCN-212ENST00000602832 RIMBP3Q9UFD9 1639 aa30.06■■■□□ 2.4
OBSCN-212ENST00000602832 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
OBSCN-212ENST00000602832 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
OBSCN-212ENST00000602832 ARHGEF11O15085 1522 aa29.91■■■□□ 2.38
OBSCN-212ENST00000602832 DNMBPQ6XZF7 1577 aa29.89■■■□□ 2.38
OBSCN-212ENST00000602832 ABCC8Q09428 1581 aa29.88■■■□□ 2.37
OBSCN-212ENST00000602832 CHD1O14646 1710 aa29.82■■■□□ 2.36
OBSCN-212ENST00000602832 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
OBSCN-212ENST00000602832 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
OBSCN-212ENST00000602832 CYB5RLQ6IPT4 315 aa29.73■■■□□ 2.35
OBSCN-212ENST00000602832 POLA1P09884 1462 aaPredicted RBP29.7■■■□□ 2.35
OBSCN-212ENST00000602832 FBLN2P98095 1184 aa29.7■■■□□ 2.35
OBSCN-212ENST00000602832 RAD54L2Q9Y4B4 1467 aa29.63■■■□□ 2.33
OBSCN-212ENST00000602832 ARAP1Q96P48 1450 aa29.6■■■□□ 2.33
OBSCN-212ENST00000602832 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
OBSCN-212ENST00000602832 SOGA1O94964 1423 aa29.55■■■□□ 2.32
OBSCN-212ENST00000602832 TRHP20396 242 aaPredicted RBP29.52■■■□□ 2.32
OBSCN-212ENST00000602832 SNAPC4Q5SXM2 1469 aa29.48■■■□□ 2.31
OBSCN-212ENST00000602832 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
OBSCN-212ENST00000602832 CUX1P39880 1505 aa29.42■■■□□ 2.3
OBSCN-212ENST00000602832 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
OBSCN-212ENST00000602832 CHMP7Q8WUX9 453 aaPredicted RBP29.38■■■□□ 2.29
OBSCN-212ENST00000602832 CLASP1Q7Z460 1538 aa29.38■■■□□ 2.29
OBSCN-212ENST00000602832 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
OBSCN-212ENST00000602832 SYNJ1O43426 1573 aa29.35■■■□□ 2.29
OBSCN-212ENST00000602832 GRIN2BQ13224 1484 aa29.32■■■□□ 2.28
OBSCN-212ENST00000602832 PBRM1Q86U86 1689 aa29.27■■■□□ 2.28
OBSCN-212ENST00000602832 SYNJ2O15056 1496 aa29.26■■■□□ 2.27
OBSCN-212ENST00000602832 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.26
OBSCN-212ENST00000602832 SUPT5HO00267 1087 aaKnown RBP29.13■■■□□ 2.25
OBSCN-212ENST00000602832 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
OBSCN-212ENST00000602832 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
OBSCN-212ENST00000602832 ERCC6L2Q5T890 1561 aa28.96■■■□□ 2.23
OBSCN-212ENST00000602832 GRIN2AQ12879 1464 aa28.96■■■□□ 2.23
OBSCN-212ENST00000602832 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
OBSCN-212ENST00000602832 ADAMTS12P58397 1594 aa28.92■■■□□ 2.22
OBSCN-212ENST00000602832 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
OBSCN-212ENST00000602832 AEBP2Q6ZN18 517 aaPredicted RBP28.87■■■□□ 2.21
OBSCN-212ENST00000602832 BIVM-ERCC5R4GMW8 1640 aa28.86■■■□□ 2.21
OBSCN-212ENST00000602832 NUP160Q12769 1436 aa28.85■■■□□ 2.21
OBSCN-212ENST00000602832 TOP2BQ02880 1626 aa28.84■■■□□ 2.21
OBSCN-212ENST00000602832 FHAD1B1AJZ9 1412 aa28.78■■■□□ 2.2
OBSCN-212ENST00000602832 SHROOM2Q13796 1616 aa28.77■■■□□ 2.2
OBSCN-212ENST00000602832 ERICH3Q5RHP9 1530 aa28.73■■■□□ 2.19
OBSCN-212ENST00000602832 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
OBSCN-212ENST00000602832 KIF13AQ9H1H9 1805 aa28.63■■■□□ 2.17
OBSCN-212ENST00000602832 JPH4Q96JJ6 628 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms