RNA–Protein interactions for RNA: ENST00000602775.5

SRA1-205, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 1 (best)

Gene SRA1, Length 1,466 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-205ENST00000602775 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
SRA1-205ENST00000602775 ABCC9O60706 1549 aa34.78■■■■□ 3.16
SRA1-205ENST00000602775 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
SRA1-205ENST00000602775 DNAJC5BQ9UF47 199 aa33.12■■■□□ 2.89
SRA1-205ENST00000602775 RB1CC1Q8TDY2 1594 aa32.8■■■□□ 2.84
SRA1-205ENST00000602775 NACADO15069 1562 aa32.43■■■□□ 2.78
SRA1-205ENST00000602775 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
SRA1-205ENST00000602775 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
SRA1-205ENST00000602775 UNC13AQ9UPW8 1703 aa32.04■■■□□ 2.72
SRA1-205ENST00000602775 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.7
SRA1-205ENST00000602775 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
SRA1-205ENST00000602775 CECR2Q9BXF3 1484 aa31.35■■■□□ 2.61
SRA1-205ENST00000602775 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
SRA1-205ENST00000602775 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
SRA1-205ENST00000602775 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
SRA1-205ENST00000602775 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
SRA1-205ENST00000602775 SCRIBQ14160 1630 aa31.18■■■□□ 2.58
SRA1-205ENST00000602775 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
SRA1-205ENST00000602775 DNAJC5Q9H3Z4 198 aa30.74■■■□□ 2.51
SRA1-205ENST00000602775 CUX2O14529 1486 aa30.12■■■□□ 2.41
SRA1-205ENST00000602775 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
SRA1-205ENST00000602775 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
SRA1-205ENST00000602775 ATAD2BQ9ULI0 1458 aa29.83■■■□□ 2.37
SRA1-205ENST00000602775 NESP48681 1621 aa29.74■■■□□ 2.35
SRA1-205ENST00000602775 HMGXB3Q12766 1538 aa29.68■■■□□ 2.34
SRA1-205ENST00000602775 SMARCA2P51531 1590 aa29.68■■■□□ 2.34
SRA1-205ENST00000602775 SMARCA4P51532 1647 aa29.65■■■□□ 2.34
SRA1-205ENST00000602775 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.32
SRA1-205ENST00000602775 THOC2Q8NI27 1593 aaKnown RBP29.48■■■□□ 2.31
SRA1-205ENST00000602775 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
SRA1-205ENST00000602775 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
SRA1-205ENST00000602775 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
SRA1-205ENST00000602775 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
SRA1-205ENST00000602775 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
SRA1-205ENST00000602775 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
SRA1-205ENST00000602775 MROH2BQ7Z745 1585 aa29.21■■■□□ 2.27
SRA1-205ENST00000602775 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
SRA1-205ENST00000602775 MRC2Q9UBG0 1479 aa29.03■■■□□ 2.24
SRA1-205ENST00000602775 WDR62O43379 1518 aa28.94■■■□□ 2.22
SRA1-205ENST00000602775 WIZO95785 1651 aa28.83■■■□□ 2.21
SRA1-205ENST00000602775 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
SRA1-205ENST00000602775 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
SRA1-205ENST00000602775 OSCARQ8IYS5 282 aa28.7■■■□□ 2.18
SRA1-205ENST00000602775 CFTRP13569 1480 aa28.6■■■□□ 2.17
SRA1-205ENST00000602775 URB2Q14146 1524 aaKnown RBP28.55■■■□□ 2.16
SRA1-205ENST00000602775 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
SRA1-205ENST00000602775 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
SRA1-205ENST00000602775 RIMBP3CA6NJZ7 1639 aa28.38■■■□□ 2.13
SRA1-205ENST00000602775 RIMBP3BA6NNM3 1639 aa28.38■■■□□ 2.13
SRA1-205ENST00000602775 RIMBP3Q9UFD9 1639 aa28.38■■■□□ 2.13
SRA1-205ENST00000602775 ZNF608Q9ULD9 1512 aaPredicted RBP28.29■■■□□ 2.12
SRA1-205ENST00000602775 IFT140Q96RY7 1462 aa28.24■■■□□ 2.11
SRA1-205ENST00000602775 ARHGEF11O15085 1522 aa28.24■■■□□ 2.11
SRA1-205ENST00000602775 PRDM2Q13029 1718 aa28.21■■■□□ 2.11
SRA1-205ENST00000602775 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
SRA1-205ENST00000602775 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
SRA1-205ENST00000602775 CYB5RLQ6IPT4 315 aa28.1■■■□□ 2.09
SRA1-205ENST00000602775 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
SRA1-205ENST00000602775 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
SRA1-205ENST00000602775 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.072e-6■■■□□ 16.6
SRA1-205ENST00000602775 TRHP20396 242 aaPredicted RBP27.97■■■□□ 2.07
SRA1-205ENST00000602775 DNMBPQ6XZF7 1577 aa27.96■■■□□ 2.07
SRA1-205ENST00000602775 CHD1O14646 1710 aa27.96■■■□□ 2.07
SRA1-205ENST00000602775 ARAP1Q96P48 1450 aa27.94■■■□□ 2.06
SRA1-205ENST00000602775 FBLN2P98095 1184 aa27.93■■■□□ 2.06
SRA1-205ENST00000602775 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
SRA1-205ENST00000602775 POLA1P09884 1462 aaPredicted RBP27.81■■■□□ 2.04
SRA1-205ENST00000602775 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
SRA1-205ENST00000602775 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
SRA1-205ENST00000602775 SOGA1O94964 1423 aa27.69■■■□□ 2.02
SRA1-205ENST00000602775 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
SRA1-205ENST00000602775 CLASP1Q7Z460 1538 aa27.62■■■□□ 2.01
SRA1-205ENST00000602775 CHMP7Q8WUX9 453 aaPredicted RBP27.59■■■□□ 2.01
SRA1-205ENST00000602775 FGD5Q6ZNL6 1462 aa27.58■■■□□ 2.01
SRA1-205ENST00000602775 SYNJ1O43426 1573 aa27.55■■■□□ 2
SRA1-205ENST00000602775 AEBP2Q6ZN18 517 aaPredicted RBP27.53■■■□□ 2
SRA1-205ENST00000602775 WDR97A6NE52 1622 aa27.52■■■□□ 2
SRA1-205ENST00000602775 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
SRA1-205ENST00000602775 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
SRA1-205ENST00000602775 CUX1P39880 1505 aa27.47■■□□□ 1.99
SRA1-205ENST00000602775 SYNJ2O15056 1496 aa27.45■■□□□ 1.99
SRA1-205ENST00000602775 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
SRA1-205ENST00000602775 PBRM1Q86U86 1689 aa27.33■■□□□ 1.96
SRA1-205ENST00000602775 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
SRA1-205ENST00000602775 ABCA10Q8WWZ4 1543 aa27.2■■□□□ 1.95
SRA1-205ENST00000602775 ABCA5Q8WWZ7 1642 aa27.2■■□□□ 1.94
SRA1-205ENST00000602775 GRIN2AQ12879 1464 aa27.14■■□□□ 1.93
SRA1-205ENST00000602775 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
SRA1-205ENST00000602775 NUP160Q12769 1436 aa27.06■■□□□ 1.92
SRA1-205ENST00000602775 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
SRA1-205ENST00000602775 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
SRA1-205ENST00000602775 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
SRA1-205ENST00000602775 FHAD1B1AJZ9 1412 aa26.95■■□□□ 1.91
SRA1-205ENST00000602775 KIF13AQ9H1H9 1805 aa26.9■■□□□ 1.9
SRA1-205ENST00000602775 PRG4Q92954 1404 aaPredicted RBP26.88■■□□□ 1.89
SRA1-205ENST00000602775 TOP2BQ02880 1626 aa26.85■■□□□ 1.89
SRA1-205ENST00000602775 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
SRA1-205ENST00000602775 SUPT5HO00267 1087 aaKnown RBP26.84■■□□□ 1.89
SRA1-205ENST00000602775 ERICH3Q5RHP9 1530 aa26.83■■□□□ 1.89
SRA1-205ENST00000602775 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms