RNA–Protein interactions for RNA: ENST00000602727.1

PARD6A-204, Transcript of par-6 family cell polarity regulator alpha, humanhuman

TSL 2

Gene PARD6A, Length 1,281 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6A-204ENST00000602727 NISCHQ9Y2I1 1504 aa41.97■■■■■ 4.31
PARD6A-204ENST00000602727 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
PARD6A-204ENST00000602727 ABCC9O60706 1549 aa36.49■■■■□ 3.43
PARD6A-204ENST00000602727 RB1CC1Q8TDY2 1594 aa35.13■■■■□ 3.21
PARD6A-204ENST00000602727 DCAF8L2P0C7V8 631 aa35.11■■■■□ 3.21
PARD6A-204ENST00000602727 NACADO15069 1562 aa35.08■■■■□ 3.21
PARD6A-204ENST00000602727 ZCCHC6Q5VYS8 1495 aaKnown RBP34.96■■■■□ 3.19
PARD6A-204ENST00000602727 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
PARD6A-204ENST00000602727 DCAF1Q9Y4B6 1507 aa34.75■■■■□ 3.15
PARD6A-204ENST00000602727 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
PARD6A-204ENST00000602727 PABPN1Q86U42 306 aaKnown RBP eCLIP34.11■■■■□ 3.05
PARD6A-204ENST00000602727 SCRIBQ14160 1630 aa34.01■■■■□ 3.03
PARD6A-204ENST00000602727 BICRAQ9NZM4 1560 aa34■■■■□ 3.03
PARD6A-204ENST00000602727 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
PARD6A-204ENST00000602727 DNAJC5BQ9UF47 199 aa33.47■■■□□ 2.95
PARD6A-204ENST00000602727 EIF4G1Q04637 1599 aaKnown RBP33.14■■■□□ 2.9
PARD6A-204ENST00000602727 CC2D2AQ9P2K1 1620 aa32.99■■■□□ 2.87
PARD6A-204ENST00000602727 CECR2Q9BXF3 1484 aa32.8■■■□□ 2.84
PARD6A-204ENST00000602727 BAZ1AQ9NRL2 1556 aaPredicted RBP32.54■■■□□ 2.8
PARD6A-204ENST00000602727 SMARCA4P51532 1647 aa32.54■■■□□ 2.8
PARD6A-204ENST00000602727 NCAPD3P42695 1498 aa32.39■■■□□ 2.78
PARD6A-204ENST00000602727 ATAD2BQ9ULI0 1458 aa32.39■■■□□ 2.78
PARD6A-204ENST00000602727 SMARCA2P51531 1590 aa32.36■■■□□ 2.77
PARD6A-204ENST00000602727 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
PARD6A-204ENST00000602727 PEG3Q9GZU2 1588 aa32.24■■■□□ 2.75
PARD6A-204ENST00000602727 HMGXB3Q12766 1538 aa32.21■■■□□ 2.75
PARD6A-204ENST00000602727 BAZ1BQ9UIG0 1483 aaKnown RBP32.14■■■□□ 2.74
PARD6A-204ENST00000602727 RSF1Q96T23 1441 aaPredicted RBP31.98■■■□□ 2.71
PARD6A-204ENST00000602727 WIZO95785 1651 aa31.95■■■□□ 2.7
PARD6A-204ENST00000602727 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
PARD6A-204ENST00000602727 NESP48681 1621 aa31.56■■■□□ 2.64
PARD6A-204ENST00000602727 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.64
PARD6A-204ENST00000602727 ERCC6Q03468 1493 aa31.49■■■□□ 2.63
PARD6A-204ENST00000602727 CADPSQ9ULU8 1353 aa31.45■■■□□ 2.63
PARD6A-204ENST00000602727 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
PARD6A-204ENST00000602727 CCDC88BA6NC98 1476 aa31.28■■■□□ 2.6
PARD6A-204ENST00000602727 CFTRP13569 1480 aa31.26■■■□□ 2.59
PARD6A-204ENST00000602727 SUPT5HO00267 1087 aaKnown RBP31.21■■■□□ 2.59
PARD6A-204ENST00000602727 KIF21AQ7Z4S6 1674 aa31.15■■■□□ 2.58
PARD6A-204ENST00000602727 CUX2O14529 1486 aa31.14■■■□□ 2.58
PARD6A-204ENST00000602727 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
PARD6A-204ENST00000602727 THOC2Q8NI27 1593 aaKnown RBP31.06■■■□□ 2.56
PARD6A-204ENST00000602727 CEP164Q9UPV0 1460 aa31.04■■■□□ 2.56
PARD6A-204ENST00000602727 MRC2Q9UBG0 1479 aa30.99■■■□□ 2.55
PARD6A-204ENST00000602727 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
PARD6A-204ENST00000602727 WDR62O43379 1518 aa30.87■■■□□ 2.53
PARD6A-204ENST00000602727 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
PARD6A-204ENST00000602727 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
PARD6A-204ENST00000602727 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
PARD6A-204ENST00000602727 DNMBPQ6XZF7 1577 aa30.53■■■□□ 2.48
PARD6A-204ENST00000602727 IFT140Q96RY7 1462 aa30.4■■■□□ 2.46
PARD6A-204ENST00000602727 CUX1P39880 1505 aa30.31■■■□□ 2.44
PARD6A-204ENST00000602727 POLA1P09884 1462 aaPredicted RBP30.31■■■□□ 2.44
PARD6A-204ENST00000602727 FGD5Q6ZNL6 1462 aa30.24■■■□□ 2.43
PARD6A-204ENST00000602727 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
PARD6A-204ENST00000602727 SOGA1O94964 1423 aa30.22■■■□□ 2.43
PARD6A-204ENST00000602727 DNAJC5Q9H3Z4 198 aa30.2■■■□□ 2.43
PARD6A-204ENST00000602727 TARBP1Q13395 1621 aaKnown RBP30.2■■■□□ 2.43
PARD6A-204ENST00000602727 WRNQ14191 1432 aaPredicted RBP eCLIP30.18■■■□□ 2.42
PARD6A-204ENST00000602727 RAD54L2Q9Y4B4 1467 aa30.17■■■□□ 2.42
PARD6A-204ENST00000602727 EIF4G3O43432 1585 aaKnown RBP30.09■■■□□ 2.41
PARD6A-204ENST00000602727 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
PARD6A-204ENST00000602727 AQRO60306 1485 aaKnown RBP eCLIP30.06■■■□□ 2.4
PARD6A-204ENST00000602727 BIVM-ERCC5R4GMW8 1640 aa30.05■■■□□ 2.4
PARD6A-204ENST00000602727 SYNJ1O43426 1573 aa30.04■■■□□ 2.4
PARD6A-204ENST00000602727 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
PARD6A-204ENST00000602727 WDR97A6NE52 1622 aa30.01■■■□□ 2.39
PARD6A-204ENST00000602727 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
PARD6A-204ENST00000602727 OSCARQ8IYS5 282 aa29.9■■■□□ 2.38
PARD6A-204ENST00000602727 GRIN2BQ13224 1484 aa29.86■■■□□ 2.37
PARD6A-204ENST00000602727 GAPVD1Q14C86 1478 aa29.85■■■□□ 2.37
PARD6A-204ENST00000602727 ABCA5Q8WWZ7 1642 aa29.8■■■□□ 2.36
PARD6A-204ENST00000602727 SNAPC4Q5SXM2 1469 aa29.79■■■□□ 2.36
PARD6A-204ENST00000602727 MAGI1Q96QZ7 1491 aaPredicted RBP29.78■■■□□ 2.36
PARD6A-204ENST00000602727 FBLN2P98095 1184 aa29.76■■■□□ 2.35
PARD6A-204ENST00000602727 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
PARD6A-204ENST00000602727 CHMP7Q8WUX9 453 aaPredicted RBP29.69■■■□□ 2.34
PARD6A-204ENST00000602727 CHD1O14646 1710 aa29.68■■■□□ 2.34
PARD6A-204ENST00000602727 SYNJ2O15056 1496 aa29.67■■■□□ 2.34
PARD6A-204ENST00000602727 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
PARD6A-204ENST00000602727 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
PARD6A-204ENST00000602727 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
PARD6A-204ENST00000602727 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
PARD6A-204ENST00000602727 TRIM41Q8WV44 630 aa29.5■■■□□ 2.31
PARD6A-204ENST00000602727 GRIN2AQ12879 1464 aa29.45■■■□□ 2.31
PARD6A-204ENST00000602727 IGF1RP08069 1367 aa29.42■■■□□ 2.3
PARD6A-204ENST00000602727 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
PARD6A-204ENST00000602727 ARHGEF11O15085 1522 aa29.35■■■□□ 2.29
PARD6A-204ENST00000602727 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
PARD6A-204ENST00000602727 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
PARD6A-204ENST00000602727 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
PARD6A-204ENST00000602727 NUP160Q12769 1436 aa29.32■■■□□ 2.28
PARD6A-204ENST00000602727 CUL7Q14999 1698 aa29.31■■■□□ 2.28
PARD6A-204ENST00000602727 CEP170Q5SW79 1584 aa29.27■■■□□ 2.28
PARD6A-204ENST00000602727 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.27
PARD6A-204ENST00000602727 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
PARD6A-204ENST00000602727 CHIC1Q5VXU3 224 aa29.12■■■□□ 2.25
PARD6A-204ENST00000602727 CYB5RLQ6IPT4 315 aa29.12■■■□□ 2.25
PARD6A-204ENST00000602727 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
PARD6A-204ENST00000602727 RAPGEF2Q9Y4G8 1499 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms