RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 NISCHQ9Y2I1 1504 aa32.74■■■□□ 2.83
SFXN2-209ENST00000602670 ABCC9O60706 1549 aa30.15■■■□□ 2.42
SFXN2-209ENST00000602670 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
SFXN2-209ENST00000602670 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
SFXN2-209ENST00000602670 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.14
SFXN2-209ENST00000602670 NACADO15069 1562 aa28.12■■■□□ 2.09
SFXN2-209ENST00000602670 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
SFXN2-209ENST00000602670 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
SFXN2-209ENST00000602670 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
SFXN2-209ENST00000602670 BICRAQ9NZM4 1560 aa27.69■■■□□ 2.02
SFXN2-209ENST00000602670 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
SFXN2-209ENST00000602670 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
SFXN2-209ENST00000602670 CC2D2AQ9P2K1 1620 aa27.22■■□□□ 1.95
SFXN2-209ENST00000602670 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
SFXN2-209ENST00000602670 ZCCHC6Q5VYS8 1495 aaKnown RBP27.04■■□□□ 1.92
SFXN2-209ENST00000602670 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
SFXN2-209ENST00000602670 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
SFXN2-209ENST00000602670 SCRIBQ14160 1630 aa26.97■■□□□ 1.91
SFXN2-209ENST00000602670 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
SFXN2-209ENST00000602670 CUX2O14529 1486 aa26.2■■□□□ 1.78
SFXN2-209ENST00000602670 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
SFXN2-209ENST00000602670 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
SFXN2-209ENST00000602670 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.73
SFXN2-209ENST00000602670 NESP48681 1621 aa25.76■■□□□ 1.71
SFXN2-209ENST00000602670 HMGXB3Q12766 1538 aa25.74■■□□□ 1.71
SFXN2-209ENST00000602670 SMARCA2P51531 1590 aa25.71■■□□□ 1.71
SFXN2-209ENST00000602670 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
SFXN2-209ENST00000602670 THOC2Q8NI27 1593 aaKnown RBP25.63■■□□□ 1.69
SFXN2-209ENST00000602670 BAZ1BQ9UIG0 1483 aaKnown RBP25.53■■□□□ 1.68
SFXN2-209ENST00000602670 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
SFXN2-209ENST00000602670 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
SFXN2-209ENST00000602670 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
SFXN2-209ENST00000602670 KIF21AQ7Z4S6 1674 aa25.41■■□□□ 1.66
SFXN2-209ENST00000602670 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
SFXN2-209ENST00000602670 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
SFXN2-209ENST00000602670 MROH2BQ7Z745 1585 aa25.23■■□□□ 1.63
SFXN2-209ENST00000602670 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
SFXN2-209ENST00000602670 WDR62O43379 1518 aa25.14■■□□□ 1.62
SFXN2-209ENST00000602670 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
SFXN2-209ENST00000602670 CEP164Q9UPV0 1460 aa24.95■■□□□ 1.58
SFXN2-209ENST00000602670 WIZO95785 1651 aa24.9■■□□□ 1.58
SFXN2-209ENST00000602670 OSCARQ8IYS5 282 aa24.87■■□□□ 1.57
SFXN2-209ENST00000602670 FANCD2Q9BXW9 1451 aa24.87■■□□□ 1.57
SFXN2-209ENST00000602670 CFTRP13569 1480 aa24.77■■□□□ 1.56
SFXN2-209ENST00000602670 URB2Q14146 1524 aaKnown RBP24.73■■□□□ 1.55
SFXN2-209ENST00000602670 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
SFXN2-209ENST00000602670 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
SFXN2-209ENST00000602670 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
SFXN2-209ENST00000602670 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
SFXN2-209ENST00000602670 ARHGEF11O15085 1522 aa24.54■■□□□ 1.52
SFXN2-209ENST00000602670 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
SFXN2-209ENST00000602670 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
SFXN2-209ENST00000602670 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
SFXN2-209ENST00000602670 IFT140Q96RY7 1462 aa24.47■■□□□ 1.51
SFXN2-209ENST00000602670 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
SFXN2-209ENST00000602670 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
SFXN2-209ENST00000602670 CYB5RLQ6IPT4 315 aa24.33■■□□□ 1.49
SFXN2-209ENST00000602670 ARAP1Q96P48 1450 aa24.27■■□□□ 1.48
SFXN2-209ENST00000602670 CHD1O14646 1710 aa24.27■■□□□ 1.48
SFXN2-209ENST00000602670 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
SFXN2-209ENST00000602670 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
SFXN2-209ENST00000602670 TRHP20396 242 aaPredicted RBP24.22■■□□□ 1.47
SFXN2-209ENST00000602670 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
SFXN2-209ENST00000602670 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
SFXN2-209ENST00000602670 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.464e-7■■■■■ 31.4
SFXN2-209ENST00000602670 FBLN2P98095 1184 aa24.09■■□□□ 1.45
SFXN2-209ENST00000602670 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
SFXN2-209ENST00000602670 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
SFXN2-209ENST00000602670 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
SFXN2-209ENST00000602670 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
SFXN2-209ENST00000602670 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
SFXN2-209ENST00000602670 SOGA1O94964 1423 aa23.92■■□□□ 1.42
SFXN2-209ENST00000602670 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
SFXN2-209ENST00000602670 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
SFXN2-209ENST00000602670 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
SFXN2-209ENST00000602670 MAGI1Q96QZ7 1491 aaPredicted RBP23.85■■□□□ 1.41
SFXN2-209ENST00000602670 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
SFXN2-209ENST00000602670 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
SFXN2-209ENST00000602670 GRIN2BQ13224 1484 aa23.79■■□□□ 1.4
SFXN2-209ENST00000602670 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
SFXN2-209ENST00000602670 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
SFXN2-209ENST00000602670 CUX1P39880 1505 aa23.74■■□□□ 1.39
SFXN2-209ENST00000602670 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
SFXN2-209ENST00000602670 ERCC6L2Q5T890 1561 aa23.58■■□□□ 1.37
SFXN2-209ENST00000602670 ABCA5Q8WWZ7 1642 aa23.57■■□□□ 1.36
SFXN2-209ENST00000602670 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
SFXN2-209ENST00000602670 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
SFXN2-209ENST00000602670 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
SFXN2-209ENST00000602670 NUP160Q12769 1436 aa23.45■■□□□ 1.34
SFXN2-209ENST00000602670 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
SFXN2-209ENST00000602670 SHROOM2Q13796 1616 aa23.41■■□□□ 1.34
SFXN2-209ENST00000602670 KIF13AQ9H1H9 1805 aa23.4■■□□□ 1.34
SFXN2-209ENST00000602670 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
SFXN2-209ENST00000602670 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
SFXN2-209ENST00000602670 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
SFXN2-209ENST00000602670 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
SFXN2-209ENST00000602670 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
SFXN2-209ENST00000602670 TOP2BQ02880 1626 aa23.2■■□□□ 1.3
SFXN2-209ENST00000602670 ABCC10Q5T3U5 1492 aa23.2■■□□□ 1.3
SFXN2-209ENST00000602670 FAM69CQ0P6D2 419 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms