RNA–Protein interactions for RNA: ENST00000602633.1

CARMIL2-208, Transcript of capping protein regulator and myosin 1 linker 2, humanhuman

TSL 3

Gene CARMIL2, Length 888 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL2-208ENST00000602633 NISCHQ9Y2I1 1504 aa41.84■■■■■ 4.29
CARMIL2-208ENST00000602633 ABCC9O60706 1549 aa37.61■■■■□ 3.61
CARMIL2-208ENST00000602633 CCDC180Q9P1Z9 1646 aa37.49■■■■□ 3.59
CARMIL2-208ENST00000602633 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
CARMIL2-208ENST00000602633 DNAJC5BQ9UF47 199 aa35.5■■■■□ 3.27
CARMIL2-208ENST00000602633 NACADO15069 1562 aa35.44■■■■□ 3.26
CARMIL2-208ENST00000602633 DCAF8L2P0C7V8 631 aa35.27■■■■□ 3.24
CARMIL2-208ENST00000602633 UNC13AQ9UPW8 1703 aa35.1■■■■□ 3.21
CARMIL2-208ENST00000602633 PABPN1Q86U42 306 aaKnown RBP eCLIP35.04■■■■□ 3.2
CARMIL2-208ENST00000602633 MYO15BQ96JP2 1530 aa34.93■■■■□ 3.18
CARMIL2-208ENST00000602633 BICRAQ9NZM4 1560 aa34.83■■■■□ 3.17
CARMIL2-208ENST00000602633 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
CARMIL2-208ENST00000602633 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
CARMIL2-208ENST00000602633 SCRIBQ14160 1630 aa34.21■■■■□ 3.07
CARMIL2-208ENST00000602633 SHROOM4Q9ULL8 1493 aa34.08■■■■□ 3.05
CARMIL2-208ENST00000602633 CC2D2AQ9P2K1 1620 aa33.98■■■■□ 3.03
CARMIL2-208ENST00000602633 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
CARMIL2-208ENST00000602633 CECR2Q9BXF3 1484 aa33.83■■■■□ 3.01
CARMIL2-208ENST00000602633 NCAPD3P42695 1498 aa32.77■■■□□ 2.84
CARMIL2-208ENST00000602633 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
CARMIL2-208ENST00000602633 SMARCA4P51532 1647 aa32.64■■■□□ 2.82
CARMIL2-208ENST00000602633 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
CARMIL2-208ENST00000602633 HMGXB3Q12766 1538 aa32.47■■■□□ 2.79
CARMIL2-208ENST00000602633 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
CARMIL2-208ENST00000602633 BAZ1AQ9NRL2 1556 aaPredicted RBP32.39■■■□□ 2.78
CARMIL2-208ENST00000602633 NESP48681 1621 aa32.37■■■□□ 2.77
CARMIL2-208ENST00000602633 ERCC6Q03468 1493 aa32.33■■■□□ 2.77
CARMIL2-208ENST00000602633 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.76
CARMIL2-208ENST00000602633 CUX2O14529 1486 aa32.31■■■□□ 2.76
CARMIL2-208ENST00000602633 MROH2BQ7Z745 1585 aa32.29■■■□□ 2.76
CARMIL2-208ENST00000602633 BAZ1BQ9UIG0 1483 aaKnown RBP32.29■■■□□ 2.76
CARMIL2-208ENST00000602633 THOC2Q8NI27 1593 aaKnown RBP31.98■■■□□ 2.71
CARMIL2-208ENST00000602633 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
CARMIL2-208ENST00000602633 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
CARMIL2-208ENST00000602633 WIZO95785 1651 aa31.92■■■□□ 2.7
CARMIL2-208ENST00000602633 CADPSQ9ULU8 1353 aa31.76■■■□□ 2.67
CARMIL2-208ENST00000602633 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
CARMIL2-208ENST00000602633 RSF1Q96T23 1441 aaPredicted RBP31.58■■■□□ 2.65
CARMIL2-208ENST00000602633 MRC2Q9UBG0 1479 aa31.53■■■□□ 2.64
CARMIL2-208ENST00000602633 WDR62O43379 1518 aa31.49■■■□□ 2.63
CARMIL2-208ENST00000602633 CFTRP13569 1480 aa31.4■■■□□ 2.62
CARMIL2-208ENST00000602633 TOP2AP11388 1531 aaKnown RBP31.4■■■□□ 2.62
CARMIL2-208ENST00000602633 FANCD2Q9BXW9 1451 aa31.39■■■□□ 2.62
CARMIL2-208ENST00000602633 CEP164Q9UPV0 1460 aa31.37■■■□□ 2.61
CARMIL2-208ENST00000602633 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
CARMIL2-208ENST00000602633 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
CARMIL2-208ENST00000602633 PRDM2Q13029 1718 aa31.1■■■□□ 2.57
CARMIL2-208ENST00000602633 TRIM41Q8WV44 630 aa30.96■■■□□ 2.55
CARMIL2-208ENST00000602633 OSCARQ8IYS5 282 aa30.86■■■□□ 2.53
CARMIL2-208ENST00000602633 ZNF608Q9ULD9 1512 aaPredicted RBP30.85■■■□□ 2.53
CARMIL2-208ENST00000602633 TOPBP1Q92547 1522 aa30.83■■■□□ 2.53
CARMIL2-208ENST00000602633 IFT140Q96RY7 1462 aa30.76■■■□□ 2.51
CARMIL2-208ENST00000602633 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
CARMIL2-208ENST00000602633 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
CARMIL2-208ENST00000602633 EIF4G3O43432 1585 aaKnown RBP30.6■■■□□ 2.49
CARMIL2-208ENST00000602633 TARBP1Q13395 1621 aaKnown RBP30.6■■■□□ 2.49
CARMIL2-208ENST00000602633 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
CARMIL2-208ENST00000602633 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
CARMIL2-208ENST00000602633 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
CARMIL2-208ENST00000602633 AQRO60306 1485 aaKnown RBP eCLIP30.54■■■□□ 2.48
CARMIL2-208ENST00000602633 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
CARMIL2-208ENST00000602633 RAD54L2Q9Y4B4 1467 aa30.45■■■□□ 2.47
CARMIL2-208ENST00000602633 CHD1O14646 1710 aa30.44■■■□□ 2.46
CARMIL2-208ENST00000602633 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
CARMIL2-208ENST00000602633 SOGA1O94964 1423 aa30.34■■■□□ 2.45
CARMIL2-208ENST00000602633 TDRD9Q8NDG6 1382 aaKnown RBP30.33■■■□□ 2.45
CARMIL2-208ENST00000602633 CUX1P39880 1505 aa30.32■■■□□ 2.44
CARMIL2-208ENST00000602633 FGD5Q6ZNL6 1462 aa30.3■■■□□ 2.44
CARMIL2-208ENST00000602633 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.43
CARMIL2-208ENST00000602633 FBLN2P98095 1184 aa30.23■■■□□ 2.43
CARMIL2-208ENST00000602633 CYB5RLQ6IPT4 315 aa30.2■■■□□ 2.43
CARMIL2-208ENST00000602633 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
CARMIL2-208ENST00000602633 ARAP1Q96P48 1450 aa30.15■■■□□ 2.42
CARMIL2-208ENST00000602633 WDR97A6NE52 1622 aa30.14■■■□□ 2.41
CARMIL2-208ENST00000602633 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
CARMIL2-208ENST00000602633 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
CARMIL2-208ENST00000602633 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
CARMIL2-208ENST00000602633 PBRM1Q86U86 1689 aa29.99■■■□□ 2.39
CARMIL2-208ENST00000602633 CHMP7Q8WUX9 453 aaPredicted RBP29.99■■■□□ 2.39
CARMIL2-208ENST00000602633 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
CARMIL2-208ENST00000602633 GAPVD1Q14C86 1478 aa29.95■■■□□ 2.39
CARMIL2-208ENST00000602633 ABCA10Q8WWZ4 1543 aa29.94■■■□□ 2.38
CARMIL2-208ENST00000602633 ABCA5Q8WWZ7 1642 aa29.93■■■□□ 2.38
CARMIL2-208ENST00000602633 SYNJ1O43426 1573 aa29.93■■■□□ 2.38
CARMIL2-208ENST00000602633 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
CARMIL2-208ENST00000602633 TRHP20396 242 aaPredicted RBP29.78■■■□□ 2.36
CARMIL2-208ENST00000602633 TOP2BQ02880 1626 aa29.77■■■□□ 2.36
CARMIL2-208ENST00000602633 WRNQ14191 1432 aaPredicted RBP eCLIP29.75■■■□□ 2.35
CARMIL2-208ENST00000602633 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
CARMIL2-208ENST00000602633 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
CARMIL2-208ENST00000602633 ADAMTS12P58397 1594 aa29.68■■■□□ 2.34
CARMIL2-208ENST00000602633 CEP170Q5SW79 1584 aa29.64■■■□□ 2.34
CARMIL2-208ENST00000602633 NUP160Q12769 1436 aa29.62■■■□□ 2.33
CARMIL2-208ENST00000602633 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
CARMIL2-208ENST00000602633 ERICH3Q5RHP9 1530 aa29.52■■■□□ 2.32
CARMIL2-208ENST00000602633 SHROOM2Q13796 1616 aa29.52■■■□□ 2.32
CARMIL2-208ENST00000602633 JPH4Q96JJ6 628 aa29.31■■■□□ 2.28
CARMIL2-208ENST00000602633 PRG4Q92954 1404 aaPredicted RBP29.3■■■□□ 2.28
CARMIL2-208ENST00000602633 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.27
CARMIL2-208ENST00000602633 IGF1RP08069 1367 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms